EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000029566 (Gene tree)
Gene ID: 101030315
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 8809 bases
Position: chrJH378137.1:6721220-6730028
Accession: 17948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026301	CSD	PF00313.22	7.2e-26	1	1
ENSSBOP00000026291	CSD	PF00313.22	9.7e-26	1	1
ENSSBOP00000026298	CSD	PF00313.22	9.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043171	YBX2-203	1008	-	ENSSBOP00000026298	335 (aa)	-	A0A2K6U318
ENSSBOT00000043139	YBX2-201	1323	-	ENSSBOP00000026266	164 (aa)	-	A0A2K6U302
ENSSBOT00000043174	YBX2-204	831	XM_010339995	ENSSBOP00000026301	276 (aa)	XP_010338297	A0A2K6U333
ENSSBOT00000043164	YBX2-202	1002	-	ENSSBOP00000026291	333 (aa)	-	A0A2K6U325

Gene Model

Click here to download ENSSBOG00000029566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029566	YBX2	97	90.511	ENSG00000006047	YBX2	99	88.957	Homo_sapiens
ENSSBOG00000029566	YBX2	57	87.975	ENSAMEG00000016564	YBX2	86	77.895	Ailuropoda_melanoleuca
ENSSBOG00000029566	YBX2	97	97.761	ENSANAG00000019540	YBX2	79	97.761	Aotus_nancymaae
ENSSBOG00000029566	YBX2	97	94.776	ENSBTAG00000009126	YBX2	83	88.000	Bos_taurus
ENSSBOG00000029566	YBX2	97	96.269	ENSCJAG00000016581	-	84	88.000	Callithrix_jacchus
ENSSBOG00000029566	YBX2	97	94.403	ENSCJAG00000042146	-	95	94.403	Callithrix_jacchus
ENSSBOG00000029566	YBX2	97	92.727	ENSCAFG00000016128	-	84	86.319	Canis_familiaris
ENSSBOG00000029566	YBX2	91	76.587	ENSCAFG00000005162	-	89	76.587	Canis_familiaris
ENSSBOG00000029566	YBX2	97	89.455	ENSCAFG00020008884	YBX2	84	83.388	Canis_lupus_dingo
ENSSBOG00000029566	YBX2	97	94.030	ENSCHIG00000016407	YBX2	83	87.333	Capra_hircus
ENSSBOG00000029566	YBX2	97	89.011	ENSTSYG00000030765	YBX2	92	89.011	Carlito_syrichta
ENSSBOG00000029566	YBX2	97	94.007	ENSCAPG00000011432	YBX2	100	94.007	Cavia_aperea
ENSSBOG00000029566	YBX2	99	92.500	ENSCPOG00000009543	YBX2	100	92.500	Cavia_porcellus
ENSSBOG00000029566	YBX2	97	99.254	ENSCCAG00000025671	YBX2	90	85.417	Cebus_capucinus
ENSSBOG00000029566	YBX2	97	94.403	ENSCATG00000036919	YBX2	83	87.625	Cercocebus_atys
ENSSBOG00000029566	YBX2	99	92.883	ENSCLAG00000010306	YBX2	99	92.883	Chinchilla_lanigera
ENSSBOG00000029566	YBX2	97	94.403	ENSCSAG00000011857	YBX2	83	87.625	Chlorocebus_sabaeus
ENSSBOG00000029566	YBX2	94	68.441	ENSCPBG00000022288	YBX2	85	69.145	Chrysemys_picta_bellii
ENSSBOG00000029566	YBX2	100	93.841	ENSCANG00000007129	YBX2	100	93.841	Colobus_angolensis_palliatus
ENSSBOG00000029566	YBX2	99	92.754	ENSCGRG00001000751	Ybx2	98	92.754	Cricetulus_griseus_chok1gshd
ENSSBOG00000029566	YBX2	97	93.657	ENSCGRG00000007683	Ybx2	98	93.657	Cricetulus_griseus_crigri
ENSSBOG00000029566	YBX2	97	92.565	ENSDNOG00000013746	YBX2	87	87.361	Dasypus_novemcinctus
ENSSBOG00000029566	YBX2	100	91.844	ENSDORG00000010882	Ybx2	100	91.844	Dipodomys_ordii
ENSSBOG00000029566	YBX2	94	89.615	ENSEASG00005018928	YBX2	83	83.219	Equus_asinus_asinus
ENSSBOG00000029566	YBX2	97	87.361	ENSECAG00000009996	YBX2	79	81.395	Equus_caballus
ENSSBOG00000029566	YBX2	97	95.149	ENSFCAG00000018097	YBX2	84	88.000	Felis_catus
ENSSBOG00000029566	YBX2	91	68.093	ENSGAGG00000016159	YBX2	89	73.152	Gopherus_agassizii
ENSSBOG00000029566	YBX2	97	92.164	ENSGGOG00000007399	YBX2	84	85.667	Gorilla_gorilla
ENSSBOG00000029566	YBX2	97	93.657	ENSHGLG00000014186	YBX2	84	86.333	Heterocephalus_glaber_female
ENSSBOG00000029566	YBX2	98	94.834	ENSSTOG00000008630	YBX2	99	94.834	Ictidomys_tridecemlineatus
ENSSBOG00000029566	YBX2	100	91.489	ENSJJAG00000013072	Ybx2	100	91.489	Jaculus_jaculus
ENSSBOG00000029566	YBX2	97	95.149	ENSLAFG00000014006	YBX2	84	90.299	Loxodonta_africana
ENSSBOG00000029566	YBX2	97	94.403	ENSMFAG00000039921	YBX2	83	87.625	Macaca_fascicularis
ENSSBOG00000029566	YBX2	97	94.403	ENSMNEG00000045221	YBX2	83	87.625	Macaca_nemestrina
ENSSBOG00000029566	YBX2	97	71.642	ENSMLEG00000029266	-	81	72.015	Mandrillus_leucophaeus
ENSSBOG00000029566	YBX2	100	94.203	ENSMLEG00000039452	YBX2	100	94.203	Mandrillus_leucophaeus
ENSSBOG00000029566	YBX2	97	94.030	ENSMAUG00000022062	Ybx2	84	87.333	Mesocricetus_auratus
ENSSBOG00000029566	YBX2	99	92.364	ENSMICG00000012453	YBX2	98	93.358	Microcebus_murinus
ENSSBOG00000029566	YBX2	99	93.478	ENSMOCG00000013958	Ybx2	98	93.478	Microtus_ochrogaster
ENSSBOG00000029566	YBX2	91	90.476	ENSMODG00000017596	YBX2	74	86.296	Monodelphis_domestica
ENSSBOG00000029566	YBX2	100	91.844	MGP_CAROLIEiJ_G0016606	Ybx2	100	91.844	Mus_caroli
ENSSBOG00000029566	YBX2	100	91.844	ENSMUSG00000018554	Ybx2	100	91.844	Mus_musculus
ENSSBOG00000029566	YBX2	97	94.776	MGP_PahariEiJ_G0017737	Ybx2	99	92.500	Mus_pahari
ENSSBOG00000029566	YBX2	100	91.844	MGP_SPRETEiJ_G0017442	Ybx2	100	91.844	Mus_spretus
ENSSBOG00000029566	YBX2	89	89.837	ENSMPUG00000010386	YBX2	93	89.837	Mustela_putorius_furo
ENSSBOG00000029566	YBX2	96	88.302	ENSMLUG00000004686	YBX2	90	81.667	Myotis_lucifugus
ENSSBOG00000029566	YBX2	97	92.164	ENSNGAG00000011707	Ybx2	85	85.333	Nannospalax_galili
ENSSBOG00000029566	YBX2	97	93.284	ENSNLEG00000008063	-	100	86.333	Nomascus_leucogenys
ENSSBOG00000029566	YBX2	97	85.448	ENSMEUG00000006947	YBX2	89	79.000	Notamacropus_eugenii
ENSSBOG00000029566	YBX2	97	87.687	ENSOPRG00000013773	YBX2	100	82.069	Ochotona_princeps
ENSSBOG00000029566	YBX2	100	91.489	ENSODEG00000017530	YBX2	100	91.489	Octodon_degus
ENSSBOG00000029566	YBX2	92	93.281	ENSOCUG00000015064	YBX2	81	93.281	Oryctolagus_cuniculus
ENSSBOG00000029566	YBX2	97	93.657	ENSOGAG00000004392	YBX2	100	93.657	Otolemur_garnettii
ENSSBOG00000029566	YBX2	97	94.403	ENSOARG00000011562	YBX2	75	94.403	Ovis_aries
ENSSBOG00000029566	YBX2	97	90.511	ENSPPAG00000041892	YBX2	99	85.000	Pan_paniscus
ENSSBOG00000029566	YBX2	97	94.052	ENSPPRG00000000782	YBX2	84	88.372	Panthera_pardus
ENSSBOG00000029566	YBX2	97	90.511	ENSPTRG00000008673	YBX2	84	84.314	Pan_troglodytes
ENSSBOG00000029566	YBX2	96	92.105	ENSPTRG00000051288	-	85	92.105	Pan_troglodytes
ENSSBOG00000029566	YBX2	97	93.657	ENSPANG00000024250	YBX2	84	86.957	Papio_anubis
ENSSBOG00000029566	YBX2	97	70.896	ENSPANG00000032747	-	66	69.030	Papio_anubis
ENSSBOG00000029566	YBX2	97	69.928	ENSPSIG00000012364	YBX2	99	72.826	Pelodiscus_sinensis
ENSSBOG00000029566	YBX2	89	87.755	ENSPCIG00000028819	YBX2	85	89.121	Phascolarctos_cinereus
ENSSBOG00000029566	YBX2	97	92.537	ENSPCAG00000008019	YBX2	83	85.667	Procavia_capensis
ENSSBOG00000029566	YBX2	97	94.776	ENSPCOG00000006030	YBX2	83	87.667	Propithecus_coquereli
ENSSBOG00000029566	YBX2	87	91.286	ENSPVAG00000005050	YBX2	66	91.286	Pteropus_vampyrus
ENSSBOG00000029566	YBX2	97	94.403	ENSRNOG00000017117	Ybx2	84	87.333	Rattus_norvegicus
ENSSBOG00000029566	YBX2	97	94.030	ENSRBIG00000040919	YBX2	84	87.291	Rhinopithecus_bieti
ENSSBOG00000029566	YBX2	97	88.000	ENSRROG00000041728	YBX2	100	82.918	Rhinopithecus_roxellana
ENSSBOG00000029566	YBX2	92	89.328	ENSSHAG00000007786	YBX2	99	78.431	Sarcophilus_harrisii
ENSSBOG00000029566	YBX2	97	93.657	ENSSARG00000000488	YBX2	83	87.000	Sorex_araneus
ENSSBOG00000029566	YBX2	99	60.573	ENSSPUG00000018250	YBX2	99	68.729	Sphenodon_punctatus
ENSSBOG00000029566	YBX2	97	95.522	ENSSSCG00000017938	YBX2	83	88.667	Sus_scrofa
ENSSBOG00000029566	YBX2	97	91.418	ENSTBEG00000001266	YBX2	80	91.418	Tupaia_belangeri
ENSSBOG00000029566	YBX2	60	98.413	ENSTTRG00000009780	YBX2	58	83.495	Tursiops_truncatus
ENSSBOG00000029566	YBX2	94	88.722	ENSUAMG00000014725	YBX2	100	88.722	Ursus_americanus
ENSSBOG00000029566	YBX2	89	88.095	ENSUMAG00000015222	YBX2	90	88.095	Ursus_maritimus
ENSSBOG00000029566	YBX2	89	76.016	ENSVPAG00000003104	-	100	76.016	Vicugna_pacos
ENSSBOG00000029566	YBX2	95	88.433	ENSVVUG00000027830	-	100	88.433	Vulpes_vulpes
ENSSBOG00000029566	YBX2	91	83.333	ENSVVUG00000012111	-	77	83.333	Vulpes_vulpes