EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000029602 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 1103 bases
Position: chrJH378114.1:5775167-5776269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026356	RRM_1	PF00076.22	6.1e-20	1	2
ENSSBOP00000026356	RRM_1	PF00076.22	6.1e-20	2	2
ENSSBOP00000026338	RRM_1	PF00076.22	7.7e-20	1	2
ENSSBOP00000026338	RRM_1	PF00076.22	7.7e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043229	-	906	-	ENSSBOP00000026356	301 (aa)	-	A0A2K6U385
ENSSBOT00000043211	-	978	-	ENSSBOP00000026338	325 (aa)	-	A0A2K6U358

Gene Model

Click here to download ENSSBOG00000029602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000029602	-	91	46.075	ENSSBOG00000005245	HNRNPA2B1	70	63.448
ENSSBOG00000029602	-	87	60.211	ENSSBOG00000020259	-	87	58.214
ENSSBOG00000029602	-	51	34.483	ENSSBOG00000026425	MSI2	70	34.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029602	-	51	62.245	ENSANAG00000028398	-	95	68.347	Aotus_nancymaae
ENSSBOG00000029602	-	50	38.509	ENSANAG00000023435	-	93	53.333	Aotus_nancymaae
ENSSBOG00000029602	-	51	61.735	ENSANAG00000037566	-	91	69.018	Aotus_nancymaae
ENSSBOG00000029602	-	54	58.049	ENSANAG00000030267	-	86	59.070	Aotus_nancymaae
ENSSBOG00000029602	-	50	63.354	ENSANAG00000030456	-	96	51.752	Aotus_nancymaae
ENSSBOG00000029602	-	50	57.436	ENSBTAG00000048345	-	69	57.436	Bos_taurus
ENSSBOG00000029602	-	52	61.972	ENSBTAG00000022762	-	88	66.568	Bos_taurus
ENSSBOG00000029602	-	52	59.296	ENSCJAG00000041746	-	77	60.591	Callithrix_jacchus
ENSSBOG00000029602	-	51	57.368	ENSCHIG00000011332	-	76	57.937	Capra_hircus
ENSSBOG00000029602	-	51	57.143	ENSTSYG00000036821	-	90	59.443	Carlito_syrichta
ENSSBOG00000029602	-	91	61.972	ENSTSYG00000031426	-	89	62.500	Carlito_syrichta
ENSSBOG00000029602	-	51	65.306	ENSCPOG00000040150	-	98	70.225	Cavia_porcellus
ENSSBOG00000029602	-	50	55.385	ENSCCAG00000021011	-	87	58.917	Cebus_capucinus
ENSSBOG00000029602	-	50	78.000	ENSCCAG00000034725	-	99	68.946	Cebus_capucinus
ENSSBOG00000029602	-	58	59.565	ENSCCAG00000037906	-	92	65.176	Cebus_capucinus
ENSSBOG00000029602	-	96	90.064	ENSCCAG00000035178	-	95	90.064	Cebus_capucinus
ENSSBOG00000029602	-	77	66.667	ENSCATG00000042348	-	91	66.883	Cercocebus_atys
ENSSBOG00000029602	-	93	61.337	ENSCATG00000041727	-	98	62.465	Cercocebus_atys
ENSSBOG00000029602	-	52	45.327	ENSCLAG00000015184	-	87	57.447	Chinchilla_lanigera
ENSSBOG00000029602	-	90	53.354	ENSCLAG00000004953	-	83	53.674	Chinchilla_lanigera
ENSSBOG00000029602	-	58	46.262	ENSCLAG00000016175	-	90	53.226	Chinchilla_lanigera
ENSSBOG00000029602	-	80	52.721	ENSCANG00000036899	-	90	54.044	Colobus_angolensis_palliatus
ENSSBOG00000029602	-	51	68.681	ENSCANG00000041842	-	83	71.786	Colobus_angolensis_palliatus
ENSSBOG00000029602	-	87	61.342	ENSCANG00000029162	-	99	61.062	Colobus_angolensis_palliatus
ENSSBOG00000029602	-	50	52.000	ENSCGRG00001000756	-	84	46.296	Cricetulus_griseus_chok1gshd
ENSSBOG00000029602	-	60	80.597	ENSCGRG00001000079	-	85	54.255	Cricetulus_griseus_chok1gshd
ENSSBOG00000029602	-	61	64.545	ENSCGRG00001000392	-	97	64.725	Cricetulus_griseus_chok1gshd
ENSSBOG00000029602	-	99	49.007	ENSCGRG00000006419	-	82	41.379	Cricetulus_griseus_crigri
ENSSBOG00000029602	-	78	56.537	ENSCGRG00000012749	-	91	66.129	Cricetulus_griseus_crigri
ENSSBOG00000029602	-	67	57.426	ENSCGRG00000011128	-	79	61.181	Cricetulus_griseus_crigri
ENSSBOG00000029602	-	53	56.000	ENSDNOG00000044709	-	84	56.180	Dasypus_novemcinctus
ENSSBOG00000029602	-	51	67.857	ENSDNOG00000036443	-	94	71.429	Dasypus_novemcinctus
ENSSBOG00000029602	-	69	75.000	ENSDORG00000024966	-	80	61.538	Dipodomys_ordii
ENSSBOG00000029602	-	51	53.158	ENSETEG00000011413	-	84	53.608	Echinops_telfairi
ENSSBOG00000029602	-	50	64.532	ENSFCAG00000033796	-	89	50.152	Felis_catus
ENSSBOG00000029602	-	90	54.103	ENSFDAG00000018460	-	90	54.103	Fukomys_damarensis
ENSSBOG00000029602	-	54	59.006	ENSFDAG00000020873	-	98	54.651	Fukomys_damarensis
ENSSBOG00000029602	-	90	61.364	ENSFDAG00000010106	-	99	60.651	Fukomys_damarensis
ENSSBOG00000029602	-	93	53.704	ENSGGOG00000039142	-	90	51.220	Gorilla_gorilla
ENSSBOG00000029602	-	92	61.180	ENSGGOG00000025446	-	97	64.756	Gorilla_gorilla
ENSSBOG00000029602	-	96	56.825	ENSGGOG00000040721	-	82	65.468	Gorilla_gorilla
ENSSBOG00000029602	-	86	62.271	ENSGGOG00000041716	-	96	63.123	Gorilla_gorilla
ENSSBOG00000029602	-	91	61.442	ENSHGLG00000007599	-	91	66.055	Heterocephalus_glaber_female
ENSSBOG00000029602	-	85	52.234	ENSHGLG00000008275	-	87	66.997	Heterocephalus_glaber_female
ENSSBOG00000029602	-	88	56.693	ENSHGLG00000006166	-	78	55.512	Heterocephalus_glaber_female
ENSSBOG00000029602	-	51	65.865	ENSHGLG00000014445	-	96	64.932	Heterocephalus_glaber_female
ENSSBOG00000029602	-	84	62.257	ENSSTOG00000030901	-	91	65.734	Ictidomys_tridecemlineatus
ENSSBOG00000029602	-	51	60.204	ENSSTOG00000025330	-	98	63.043	Ictidomys_tridecemlineatus
ENSSBOG00000029602	-	52	60.563	ENSJJAG00000002569	-	96	62.125	Jaculus_jaculus
ENSSBOG00000029602	-	58	78.125	ENSMFAG00000031209	-	96	64.706	Macaca_fascicularis
ENSSBOG00000029602	-	58	78.125	ENSMMUG00000045923	-	96	65.546	Macaca_mulatta
ENSSBOG00000029602	-	58	78.125	ENSMNEG00000039618	-	98	63.025	Macaca_nemestrina
ENSSBOG00000029602	-	57	87.500	ENSMNEG00000026512	-	100	71.885	Macaca_nemestrina
ENSSBOG00000029602	-	64	50.237	ENSMLEG00000033256	-	76	55.229	Mandrillus_leucophaeus
ENSSBOG00000029602	-	56	81.208	ENSMGAG00000009565	HNRNPA3	67	81.208	Meleagris_gallopavo
ENSSBOG00000029602	-	51	63.590	ENSMICG00000029394	-	88	70.213	Microcebus_murinus
ENSSBOG00000029602	-	86	75.649	ENSMICG00000027841	-	89	74.679	Microcebus_murinus
ENSSBOG00000029602	-	53	53.614	ENSMICG00000034776	-	78	66.129	Microcebus_murinus
ENSSBOG00000029602	-	52	58.216	ENSMOCG00000007714	-	79	61.243	Microtus_ochrogaster
ENSSBOG00000029602	-	87	40.070	ENSMOCG00000021968	-	59	55.172	Microtus_ochrogaster
ENSSBOG00000029602	-	81	56.597	ENSMUSG00000099115	Gm17190	80	61.486	Mus_musculus
ENSSBOG00000029602	-	51	66.327	ENSMPUG00000018063	-	97	62.376	Mustela_putorius_furo
ENSSBOG00000029602	-	69	56.604	ENSNGAG00000011947	-	58	62.000	Nannospalax_galili
ENSSBOG00000029602	-	61	82.639	ENSNGAG00000021745	Hnrnpa3	95	72.176	Nannospalax_galili
ENSSBOG00000029602	-	51	60.000	ENSNGAG00000003815	-	94	65.169	Nannospalax_galili
ENSSBOG00000029602	-	51	43.915	ENSNGAG00000016965	-	92	55.014	Nannospalax_galili
ENSSBOG00000029602	-	57	61.404	ENSNLEG00000032894	-	71	61.881	Nomascus_leucogenys
ENSSBOG00000029602	-	50	78.523	ENSNLEG00000015913	-	99	70.225	Nomascus_leucogenys
ENSSBOG00000029602	-	51	65.657	ENSODEG00000006322	-	92	72.327	Octodon_degus
ENSSBOG00000029602	-	51	61.735	ENSODEG00000010232	-	97	63.686	Octodon_degus
ENSSBOG00000029602	-	71	57.769	ENSODEG00000015395	-	79	60.956	Octodon_degus
ENSSBOG00000029602	-	52	69.643	ENSOCUG00000006431	-	59	73.856	Oryctolagus_cuniculus
ENSSBOG00000029602	-	64	85.714	ENSPPAG00000037195	-	85	55.793	Pan_paniscus
ENSSBOG00000029602	-	100	56.790	ENSPPAG00000040384	-	86	55.806	Pan_paniscus
ENSSBOG00000029602	-	90	51.027	ENSPPRG00000009266	-	66	56.633	Panthera_pardus
ENSSBOG00000029602	-	90	51.712	ENSPTIG00000021689	-	66	57.143	Panthera_tigris_altaica
ENSSBOG00000029602	-	73	67.910	ENSPTRG00000051354	-	70	64.331	Pan_troglodytes
ENSSBOG00000029602	-	64	85.714	ENSPTRG00000048463	-	85	55.793	Pan_troglodytes
ENSSBOG00000029602	-	87	57.875	ENSPTRG00000045446	-	96	60.133	Pan_troglodytes
ENSSBOG00000029602	-	50	70.861	ENSPANG00000022665	-	59	61.084	Papio_anubis
ENSSBOG00000029602	-	65	58.400	ENSPANG00000019564	-	81	57.851	Papio_anubis
ENSSBOG00000029602	-	87	71.385	ENSPANG00000013447	-	91	72.000	Papio_anubis
ENSSBOG00000029602	-	76	53.114	ENSPANG00000035630	-	90	53.763	Papio_anubis
ENSSBOG00000029602	-	51	65.816	ENSPEMG00000018087	-	99	69.382	Peromyscus_maniculatus_bairdii
ENSSBOG00000029602	-	70	49.561	ENSPLAG00000009033	HNRNPA3	67	64.331	Poecilia_latipinna
ENSSBOG00000029602	-	58	59.825	ENSPPYG00000001212	-	88	52.321	Pongo_abelii
ENSSBOG00000029602	-	85	51.661	ENSPPYG00000003382	-	54	60.839	Pongo_abelii
ENSSBOG00000029602	-	51	65.482	ENSRNOG00000038905	AABR07048397.1	99	71.910	Rattus_norvegicus
ENSSBOG00000029602	-	51	64.322	ENSRNOG00000027006	LOC100911361	99	71.229	Rattus_norvegicus
ENSSBOG00000029602	-	90	69.156	ENSRBIG00000041913	-	90	71.028	Rhinopithecus_bieti
ENSSBOG00000029602	-	74	61.883	ENSRBIG00000036332	-	66	80.537	Rhinopithecus_bieti
ENSSBOG00000029602	-	69	64.490	ENSRROG00000033280	-	90	66.667	Rhinopithecus_roxellana
ENSSBOG00000029602	-	80	77.551	ENSRROG00000041363	-	99	60.411	Rhinopithecus_roxellana
ENSSBOG00000029602	-	51	65.657	ENSSPUG00000005423	HNRNPA3	80	81.818	Sphenodon_punctatus
ENSSBOG00000029602	-	58	45.545	ENSSSCG00000033138	-	92	47.855	Sus_scrofa
ENSSBOG00000029602	-	69	60.643	ENSSSCG00000036878	-	73	58.197	Sus_scrofa
ENSSBOG00000029602	-	99	69.274	ENSTTRG00000015563	-	88	71.254	Tursiops_truncatus
ENSSBOG00000029602	-	52	56.716	ENSVVUG00000012340	-	76	57.692	Vulpes_vulpes
ENSSBOG00000029602	-	51	55.612	ENSVVUG00000014827	-	74	56.311	Vulpes_vulpes