EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000029624 (Gene tree)
Gene ID: 101037141
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 49343 bases
Position: chrJH378264.1:2511679-2561021
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026408	ResIII	PF04851.15	7.6e-07	1	1
ENSSBOP00000026398	ResIII	PF04851.15	8.5e-07	1	1
ENSSBOP00000026374	ResIII	PF04851.15	8.7e-07	1	1
ENSSBOP00000026382	ResIII	PF04851.15	8.7e-07	1	1
ENSSBOP00000026408	DEAD	PF00270.29	4.4e-50	1	1
ENSSBOP00000026398	DEAD	PF00270.29	8.6e-50	1	1
ENSSBOP00000026374	DEAD	PF00270.29	8.7e-50	1	1
ENSSBOP00000026382	DEAD	PF00270.29	8.7e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043247	DDX42-201	3741	XM_003942440	ENSSBOP00000026374	933 (aa)	XP_003942489	A0A2K6U3C5
ENSSBOT00000043281	DDX42-204	2148	-	ENSSBOP00000026408	715 (aa)	-	A0A2K6U3C7
ENSSBOT00000043255	DDX42-202	3777	-	ENSSBOP00000026382	933 (aa)	-	A0A2K6U3C5
ENSSBOT00000043271	DDX42-203	2787	-	ENSSBOP00000026398	928 (aa)	-	A0A2K6U3B7

Gene Model

Click here to download ENSSBOG00000029624's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000029624	DDX42	54	33.753	ENSSBOG00000035787	DDX52	65	34.000
ENSSBOG00000029624	DDX42	57	37.442	ENSSBOG00000019095	-	69	36.854
ENSSBOG00000029624	DDX42	54	30.287	ENSSBOG00000024694	EIF4A3	90	30.729
ENSSBOG00000029624	DDX42	50	30.769	ENSSBOG00000029671	DDX6	72	30.769
ENSSBOG00000029624	DDX42	56	38.164	ENSSBOG00000035231	DDX4	64	36.304
ENSSBOG00000029624	DDX42	63	38.085	ENSSBOG00000033581	DDX41	81	35.472
ENSSBOG00000029624	DDX42	51	31.793	ENSSBOG00000034939	DDX39A	88	30.738
ENSSBOG00000029624	DDX42	52	32.300	ENSSBOG00000024833	DDX55	66	32.300
ENSSBOG00000029624	DDX42	51	33.245	ENSSBOG00000022735	DDX10	53	33.598
ENSSBOG00000029624	DDX42	52	40.347	ENSSBOG00000025799	DDX23	51	38.915
ENSSBOG00000029624	DDX42	50	31.183	ENSSBOG00000031482	DDX19A	76	31.183
ENSSBOG00000029624	DDX42	54	34.577	ENSSBOG00000035812	DDX49	83	34.577
ENSSBOG00000029624	DDX42	60	36.406	ENSSBOG00000024547	DDX17	59	35.914
ENSSBOG00000029624	DDX42	59	38.128	ENSSBOG00000024961	DDX43	74	38.128
ENSSBOG00000029624	DDX42	59	33.102	ENSSBOG00000035527	DDX59	68	32.870
ENSSBOG00000029624	DDX42	79	37.500	ENSSBOG00000018926	DDX5	84	41.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029624	DDX42	100	98.614	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSSBOG00000029624	DDX42	91	80.851	ENSAPOG00000017675	ddx42	97	74.237	Acanthochromis_polyacanthus
ENSSBOG00000029624	DDX42	100	96.368	ENSAMEG00000003200	DDX42	100	96.368	Ailuropoda_melanoleuca
ENSSBOG00000029624	DDX42	89	81.337	ENSACIG00000007376	ddx42	99	72.509	Amphilophus_citrinellus
ENSSBOG00000029624	DDX42	98	77.195	ENSAOCG00000003520	ddx42	99	72.046	Amphiprion_ocellaris
ENSSBOG00000029624	DDX42	92	81.212	ENSAPEG00000000984	ddx42	99	72.246	Amphiprion_percula
ENSSBOG00000029624	DDX42	99	70.964	ENSATEG00000022920	ddx42	99	72.228	Anabas_testudineus
ENSSBOG00000029624	DDX42	97	90.429	ENSAPLG00000010544	DDX42	100	84.510	Anas_platyrhynchos
ENSSBOG00000029624	DDX42	97	89.240	ENSACAG00000003994	DDX42	99	84.485	Anolis_carolinensis
ENSSBOG00000029624	DDX42	100	99.572	ENSANAG00000035693	DDX42	100	99.572	Aotus_nancymaae
ENSSBOG00000029624	DDX42	97	77.857	ENSACLG00000025113	ddx42	99	73.007	Astatotilapia_calliptera
ENSSBOG00000029624	DDX42	88	83.917	ENSAMXG00000011435	ddx42	99	69.476	Astyanax_mexicanus
ENSSBOG00000029624	DDX42	100	94.658	ENSBTAG00000021058	DDX42	100	95.192	Bos_taurus
ENSSBOG00000029624	DDX42	82	52.623	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSSBOG00000029624	DDX42	100	99.465	ENSCJAG00000019649	DDX42	100	99.465	Callithrix_jacchus
ENSSBOG00000029624	DDX42	100	96.364	ENSCAFG00000012818	DDX42	100	96.364	Canis_familiaris
ENSSBOG00000029624	DDX42	100	96.471	ENSCAFG00020026631	DDX42	100	96.471	Canis_lupus_dingo
ENSSBOG00000029624	DDX42	100	95.421	ENSCHIG00000014431	DDX42	100	95.208	Capra_hircus
ENSSBOG00000029624	DDX42	100	95.615	ENSTSYG00000001380	DDX42	100	95.615	Carlito_syrichta
ENSSBOG00000029624	DDX42	94	75.852	ENSCAPG00000013621	DDX42	94	75.852	Cavia_aperea
ENSSBOG00000029624	DDX42	100	95.708	ENSCPOG00000005633	DDX42	100	95.708	Cavia_porcellus
ENSSBOG00000029624	DDX42	97	99.568	ENSCCAG00000020612	DDX42	100	99.258	Cebus_capucinus
ENSSBOG00000029624	DDX42	100	98.614	ENSCATG00000030490	DDX42	100	98.614	Cercocebus_atys
ENSSBOG00000029624	DDX42	100	96.563	ENSCLAG00000003497	DDX42	100	96.563	Chinchilla_lanigera
ENSSBOG00000029624	DDX42	100	94.698	ENSCSAG00000003914	DDX42	100	94.698	Chlorocebus_sabaeus
ENSSBOG00000029624	DDX42	79	95.495	ENSCHOG00000006241	DDX42	79	95.495	Choloepus_hoffmanni
ENSSBOG00000029624	DDX42	97	89.392	ENSCPBG00000026682	DDX42	100	84.447	Chrysemys_picta_bellii
ENSSBOG00000029624	DDX42	62	66.368	ENSCING00000001837	-	94	67.991	Ciona_intestinalis
ENSSBOG00000029624	DDX42	54	71.802	ENSCSAVG00000002180	-	99	72.178	Ciona_savignyi
ENSSBOG00000029624	DDX42	100	98.507	ENSCANG00000034663	DDX42	100	98.507	Colobus_angolensis_palliatus
ENSSBOG00000029624	DDX42	100	95.376	ENSCGRG00001009775	Ddx42	100	95.591	Cricetulus_griseus_chok1gshd
ENSSBOG00000029624	DDX42	100	95.376	ENSCGRG00000011718	Ddx42	100	95.591	Cricetulus_griseus_crigri
ENSSBOG00000029624	DDX42	97	75.892	ENSCSEG00000021574	ddx42	99	70.117	Cynoglossus_semilaevis
ENSSBOG00000029624	DDX42	97	77.233	ENSCVAG00000011404	ddx42	99	71.902	Cyprinodon_variegatus
ENSSBOG00000029624	DDX42	90	79.552	ENSDARG00000037928	ddx42	99	72.009	Danio_rerio
ENSSBOG00000029624	DDX42	100	89.861	ENSDNOG00000007961	DDX42	100	89.861	Dasypus_novemcinctus
ENSSBOG00000029624	DDX42	97	92.735	ENSDORG00000004199	Ddx42	100	87.889	Dipodomys_ordii
ENSSBOG00000029624	DDX42	78	62.324	FBgn0036104	CG6418	87	56.133	Drosophila_melanogaster
ENSSBOG00000029624	DDX42	87	76.480	ENSEBUG00000001155	ddx42	91	73.342	Eptatretus_burgeri
ENSSBOG00000029624	DDX42	100	97.112	ENSEASG00005013089	DDX42	100	97.112	Equus_asinus_asinus
ENSSBOG00000029624	DDX42	100	97.005	ENSECAG00000022684	DDX42	100	97.005	Equus_caballus
ENSSBOG00000029624	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSSBOG00000029624	DDX42	95	76.633	ENSELUG00000020593	ddx42	100	70.409	Esox_lucius
ENSSBOG00000029624	DDX42	100	97.112	ENSFCAG00000003499	DDX42	100	97.112	Felis_catus
ENSSBOG00000029624	DDX42	97	90.504	ENSFALG00000004675	DDX42	78	85.989	Ficedula_albicollis
ENSSBOG00000029624	DDX42	100	96.030	ENSFDAG00000020516	DDX42	100	96.030	Fukomys_damarensis
ENSSBOG00000029624	DDX42	97	76.868	ENSFHEG00000023290	ddx42	99	71.140	Fundulus_heteroclitus
ENSSBOG00000029624	DDX42	81	79.417	ENSGMOG00000004595	ddx42	88	78.279	Gadus_morhua
ENSSBOG00000029624	DDX42	97	87.972	ENSGALG00000000581	DDX42	100	83.299	Gallus_gallus
ENSSBOG00000029624	DDX42	91	80.305	ENSGAFG00000011846	ddx42	96	74.208	Gambusia_affinis
ENSSBOG00000029624	DDX42	92	75.569	ENSGACG00000009782	ddx42	99	68.342	Gasterosteus_aculeatus
ENSSBOG00000029624	DDX42	97	89.220	ENSGAGG00000024411	DDX42	99	84.205	Gopherus_agassizii
ENSSBOG00000029624	DDX42	100	98.614	ENSGGOG00000006779	DDX42	100	98.614	Gorilla_gorilla
ENSSBOG00000029624	DDX42	97	77.857	ENSHBUG00000008705	ddx42	99	73.220	Haplochromis_burtoni
ENSSBOG00000029624	DDX42	100	91.935	ENSHGLG00000010024	DDX42	100	91.935	Heterocephalus_glaber_female
ENSSBOG00000029624	DDX42	97	73.851	ENSHGLG00100007138	-	95	73.364	Heterocephalus_glaber_male
ENSSBOG00000029624	DDX42	100	96.257	ENSHGLG00100004479	-	100	96.257	Heterocephalus_glaber_male
ENSSBOG00000029624	DDX42	88	82.353	ENSHCOG00000003357	ddx42	98	74.194	Hippocampus_comes
ENSSBOG00000029624	DDX42	87	83.628	ENSIPUG00000013327	ddx42	100	70.789	Ictalurus_punctatus
ENSSBOG00000029624	DDX42	100	96.798	ENSSTOG00000008922	DDX42	100	96.798	Ictidomys_tridecemlineatus
ENSSBOG00000029624	DDX42	100	95.591	ENSJJAG00000011727	Ddx42	100	95.591	Jaculus_jaculus
ENSSBOG00000029624	DDX42	91	79.758	ENSKMAG00000009914	ddx42	99	72.660	Kryptolebias_marmoratus
ENSSBOG00000029624	DDX42	88	77.414	ENSLBEG00000004687	ddx42	99	67.548	Labrus_bergylta
ENSSBOG00000029624	DDX42	91	85.054	ENSLACG00000013476	DDX42	97	78.579	Latimeria_chalumnae
ENSSBOG00000029624	DDX42	97	81.042	ENSLOCG00000011764	ddx42	100	74.973	Lepisosteus_oculatus
ENSSBOG00000029624	DDX42	100	96.471	ENSLAFG00000003249	DDX42	100	96.471	Loxodonta_africana
ENSSBOG00000029624	DDX42	100	98.401	ENSMFAG00000031356	DDX42	100	98.401	Macaca_fascicularis
ENSSBOG00000029624	DDX42	100	98.392	ENSMMUG00000016762	DDX42	100	98.392	Macaca_mulatta
ENSSBOG00000029624	DDX42	100	98.401	ENSMNEG00000038250	DDX42	100	98.401	Macaca_nemestrina
ENSSBOG00000029624	DDX42	100	98.507	ENSMLEG00000043080	DDX42	100	98.507	Mandrillus_leucophaeus
ENSSBOG00000029624	DDX42	97	78.367	ENSMAMG00000021888	ddx42	98	72.228	Mastacembelus_armatus
ENSSBOG00000029624	DDX42	97	77.857	ENSMZEG00005023103	ddx42	99	73.007	Maylandia_zebra
ENSSBOG00000029624	DDX42	97	88.951	ENSMGAG00000001822	DDX42	100	82.645	Meleagris_gallopavo
ENSSBOG00000029624	DDX42	97	97.557	ENSMAUG00000020774	-	94	97.301	Mesocricetus_auratus
ENSSBOG00000029624	DDX42	100	96.895	ENSMICG00000009952	DDX42	100	96.878	Microcebus_murinus
ENSSBOG00000029624	DDX42	100	94.839	ENSMOCG00000015504	Ddx42	100	94.839	Microtus_ochrogaster
ENSSBOG00000029624	DDX42	95	72.886	ENSMMOG00000016963	ddx42	87	71.313	Mola_mola
ENSSBOG00000029624	DDX42	50	97.645	ENSMODG00000009917	-	98	97.645	Monodelphis_domestica
ENSSBOG00000029624	DDX42	92	81.032	ENSMALG00000007800	ddx42	99	73.155	Monopterus_albus
ENSSBOG00000029624	DDX42	100	96.237	MGP_CAROLIEiJ_G0017314	Ddx42	100	96.237	Mus_caroli
ENSSBOG00000029624	DDX42	100	96.237	ENSMUSG00000020705	Ddx42	100	96.237	Mus_musculus
ENSSBOG00000029624	DDX42	77	99.638	MGP_PahariEiJ_G0018444	-	100	99.403	Mus_pahari
ENSSBOG00000029624	DDX42	100	96.344	MGP_SPRETEiJ_G0018158	Ddx42	100	96.344	Mus_spretus
ENSSBOG00000029624	DDX42	100	96.387	ENSMPUG00000014921	DDX42	100	96.387	Mustela_putorius_furo
ENSSBOG00000029624	DDX42	100	95.047	ENSMLUG00000011645	DDX42	100	95.047	Myotis_lucifugus
ENSSBOG00000029624	DDX42	100	96.348	ENSNGAG00000021897	Ddx42	100	96.348	Nannospalax_galili
ENSSBOG00000029624	DDX42	87	81.111	ENSNBRG00000004466	ddx42	99	71.732	Neolamprologus_brichardi
ENSSBOG00000029624	DDX42	100	98.507	ENSNLEG00000004248	DDX42	100	99.429	Nomascus_leucogenys
ENSSBOG00000029624	DDX42	81	82.444	ENSMEUG00000013227	-	85	82.444	Notamacropus_eugenii
ENSSBOG00000029624	DDX42	100	95.197	ENSOPRG00000014960	DDX42	100	95.197	Ochotona_princeps
ENSSBOG00000029624	DDX42	100	93.018	ENSODEG00000007810	DDX42	100	93.018	Octodon_degus
ENSSBOG00000029624	DDX42	92	80.873	ENSONIG00000000734	ddx42	99	73.114	Oreochromis_niloticus
ENSSBOG00000029624	DDX42	75	92.135	ENSOANG00000000265	DDX42	100	92.208	Ornithorhynchus_anatinus
ENSSBOG00000029624	DDX42	97	96.983	ENSOCUG00000004304	DDX42	88	96.296	Oryctolagus_cuniculus
ENSSBOG00000029624	DDX42	98	76.387	ENSORLG00000002395	ddx42	100	69.809	Oryzias_latipes
ENSSBOG00000029624	DDX42	98	76.671	ENSORLG00020011621	ddx42	100	71.414	Oryzias_latipes_hni
ENSSBOG00000029624	DDX42	98	76.529	ENSORLG00015004487	ddx42	100	71.203	Oryzias_latipes_hsok
ENSSBOG00000029624	DDX42	90	81.135	ENSOMEG00000020093	ddx42	100	71.160	Oryzias_melastigma
ENSSBOG00000029624	DDX42	100	96.478	ENSOGAG00000006872	DDX42	100	96.478	Otolemur_garnettii
ENSSBOG00000029624	DDX42	100	95.042	ENSOARG00000013540	DDX42	100	95.042	Ovis_aries
ENSSBOG00000029624	DDX42	100	98.721	ENSPPAG00000007496	DDX42	100	98.721	Pan_paniscus
ENSSBOG00000029624	DDX42	100	97.005	ENSPPRG00000002740	DDX42	100	97.005	Panthera_pardus
ENSSBOG00000029624	DDX42	100	96.898	ENSPTIG00000009932	DDX42	100	96.898	Panthera_tigris_altaica
ENSSBOG00000029624	DDX42	100	98.721	ENSPTRG00000009523	DDX42	100	98.721	Pan_troglodytes
ENSSBOG00000029624	DDX42	100	98.401	ENSPANG00000020990	DDX42	100	98.401	Papio_anubis
ENSSBOG00000029624	DDX42	100	70.664	ENSPKIG00000002901	ddx42	99	70.954	Paramormyrops_kingsleyae
ENSSBOG00000029624	DDX42	94	91.630	ENSPSIG00000010289	DDX42	98	91.502	Pelodiscus_sinensis
ENSSBOG00000029624	DDX42	93	76.807	ENSPMGG00000009323	ddx42	100	68.081	Periophthalmus_magnuspinnatus
ENSSBOG00000029624	DDX42	100	95.489	ENSPEMG00000006755	Ddx42	100	95.704	Peromyscus_maniculatus_bairdii
ENSSBOG00000029624	DDX42	87	75.079	ENSPMAG00000005580	ddx42	100	73.097	Petromyzon_marinus
ENSSBOG00000029624	DDX42	100	91.640	ENSPCIG00000009093	DDX42	100	91.314	Phascolarctos_cinereus
ENSSBOG00000029624	DDX42	91	81.098	ENSPFOG00000014104	ddx42	99	71.458	Poecilia_formosa
ENSSBOG00000029624	DDX42	91	80.945	ENSPLAG00000010522	ddx42	99	71.458	Poecilia_latipinna
ENSSBOG00000029624	DDX42	91	80.945	ENSPMEG00000010744	ddx42	99	71.354	Poecilia_mexicana
ENSSBOG00000029624	DDX42	97	77.345	ENSPREG00000009926	ddx42	99	70.868	Poecilia_reticulata
ENSSBOG00000029624	DDX42	100	96.178	ENSPPYG00000008531	DDX42	100	96.178	Pongo_abelii
ENSSBOG00000029624	DDX42	97	90.086	ENSPCAG00000002474	DDX42	100	90.128	Procavia_capensis
ENSSBOG00000029624	DDX42	100	87.152	ENSPCOG00000001559	DDX42	98	89.528	Propithecus_coquereli
ENSSBOG00000029624	DDX42	97	95.259	ENSPVAG00000000160	DDX42	100	92.308	Pteropus_vampyrus
ENSSBOG00000029624	DDX42	95	75.367	ENSPNYG00000013954	ddx42	97	70.263	Pundamilia_nyererei
ENSSBOG00000029624	DDX42	87	83.923	ENSPNAG00000017352	ddx42	99	69.350	Pygocentrus_nattereri
ENSSBOG00000029624	DDX42	100	95.591	ENSRNOG00000009474	Ddx42	100	95.806	Rattus_norvegicus
ENSSBOG00000029624	DDX42	100	98.294	ENSRBIG00000004781	DDX42	100	98.294	Rhinopithecus_bieti
ENSSBOG00000029624	DDX42	100	98.401	ENSRROG00000029794	DDX42	100	98.401	Rhinopithecus_roxellana
ENSSBOG00000029624	DDX42	77	64.364	ENSSHAG00000007919	-	99	60.656	Sarcophilus_harrisii
ENSSBOG00000029624	DDX42	100	91.958	ENSSHAG00000012896	-	100	91.631	Sarcophilus_harrisii
ENSSBOG00000029624	DDX42	88	83.830	ENSSFOG00015014064	ddx42	81	81.866	Scleropages_formosus
ENSSBOG00000029624	DDX42	91	80.699	ENSSMAG00000009077	ddx42	99	72.135	Scophthalmus_maximus
ENSSBOG00000029624	DDX42	92	79.790	ENSSDUG00000022221	ddx42	99	72.046	Seriola_dumerili
ENSSBOG00000029624	DDX42	92	79.818	ENSSLDG00000018483	ddx42	99	71.565	Seriola_lalandi_dorsalis
ENSSBOG00000029624	DDX42	100	95.508	ENSSARG00000009847	DDX42	100	95.508	Sorex_araneus
ENSSBOG00000029624	DDX42	97	91.105	ENSSPUG00000018806	DDX42	100	85.232	Sphenodon_punctatus
ENSSBOG00000029624	DDX42	92	80.543	ENSSPAG00000013055	ddx42	99	72.009	Stegastes_partitus
ENSSBOG00000029624	DDX42	96	97.681	ENSSSCG00000017289	DDX42	97	94.913	Sus_scrofa
ENSSBOG00000029624	DDX42	96	91.304	ENSTGUG00000001931	DDX42	100	83.560	Taeniopygia_guttata
ENSSBOG00000029624	DDX42	91	79.756	ENSTRUG00000010711	ddx42	99	81.556	Takifugu_rubripes
ENSSBOG00000029624	DDX42	89	93.396	ENSTBEG00000010159	DDX42	99	93.684	Tupaia_belangeri
ENSSBOG00000029624	DDX42	100	96.368	ENSTTRG00000006962	DDX42	100	96.368	Tursiops_truncatus
ENSSBOG00000029624	DDX42	100	96.154	ENSUAMG00000007321	DDX42	100	96.154	Ursus_americanus
ENSSBOG00000029624	DDX42	100	95.299	ENSUMAG00000017438	DDX42	100	95.299	Ursus_maritimus
ENSSBOG00000029624	DDX42	100	87.487	ENSVPAG00000009633	DDX42	100	87.487	Vicugna_pacos
ENSSBOG00000029624	DDX42	100	96.684	ENSVVUG00000006095	DDX42	100	96.684	Vulpes_vulpes
ENSSBOG00000029624	DDX42	98	81.560	ENSXETG00000003245	ddx42	100	76.514	Xenopus_tropicalis
ENSSBOG00000029624	DDX42	88	81.388	ENSXCOG00000017560	ddx42	97	71.934	Xiphophorus_couchianus
ENSSBOG00000029624	DDX42	91	80.916	ENSXMAG00000008138	ddx42	99	72.650	Xiphophorus_maculatus