EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000029672 (Gene tree)
Gene ID: 101050886
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 23170 bases
Position: chrJH378159.1:2327526-2350695
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026494	HAT	PF02184.16	7e-43	1	2
ENSSBOP00000026494	HAT	PF02184.16	7e-43	2	2
ENSSBOP00000026479	HAT	PF02184.16	1.2e-30	1	2
ENSSBOP00000026479	HAT	PF02184.16	1.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043367	CRNKL1-202	5397	XM_003933158	ENSSBOP00000026494	687 (aa)	XP_003933207	A0A2K6U3P3
ENSSBOT00000043352	CRNKL1-201	2355	-	ENSSBOP00000026479	784 (aa)	-	A0A2K6U3M9

Gene Model

Click here to download ENSSBOG00000029672's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029672	CRNKL1	100	99.127	ENSG00000101343	CRNKL1	100	99.127	Homo_sapiens
ENSSBOG00000029672	CRNKL1	99	86.131	ENSAPOG00000009705	crnkl1	97	86.478	Acanthochromis_polyacanthus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSAMEG00000000270	CRNKL1	99	85.921	Ailuropoda_melanoleuca
ENSSBOG00000029672	CRNKL1	99	84.840	ENSACIG00000015267	crnkl1	89	86.787	Amphilophus_citrinellus
ENSSBOG00000029672	CRNKL1	99	86.277	ENSAOCG00000021964	crnkl1	91	86.277	Amphiprion_ocellaris
ENSSBOG00000029672	CRNKL1	99	86.131	ENSAPEG00000015041	crnkl1	91	86.131	Amphiprion_percula
ENSSBOG00000029672	CRNKL1	99	85.882	ENSATEG00000001068	crnkl1	89	85.926	Anabas_testudineus
ENSSBOG00000029672	CRNKL1	99	90.247	ENSAPLG00000013105	CRNKL1	98	91.654	Anas_platyrhynchos
ENSSBOG00000029672	CRNKL1	99	92.387	ENSACAG00000005284	CRNKL1	99	92.387	Anolis_carolinensis
ENSSBOG00000029672	CRNKL1	92	99.842	ENSANAG00000024889	CRNKL1	100	99.842	Aotus_nancymaae
ENSSBOG00000029672	CRNKL1	99	87.297	ENSACLG00000010813	crnkl1	90	87.297	Astatotilapia_calliptera
ENSSBOG00000029672	CRNKL1	97	87.500	ENSAMXG00000018334	crnkl1	92	86.257	Astyanax_mexicanus
ENSSBOG00000029672	CRNKL1	100	96.652	ENSBTAG00000008472	CRNKL1	99	96.652	Bos_taurus
ENSSBOG00000029672	CRNKL1	93	62.986	WBGene00019762	M03F8.3	90	62.500	Caenorhabditis_elegans
ENSSBOG00000029672	CRNKL1	100	99.709	ENSCJAG00000005393	CRNKL1	100	99.709	Callithrix_jacchus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSCAFG00000005333	CRNKL1	94	97.234	Canis_familiaris
ENSSBOG00000029672	CRNKL1	100	97.234	ENSCAFG00020027488	CRNKL1	100	97.234	Canis_lupus_dingo
ENSSBOG00000029672	CRNKL1	100	95.488	ENSCHIG00000013171	CRNKL1	99	95.488	Capra_hircus
ENSSBOG00000029672	CRNKL1	100	98.253	ENSTSYG00000004197	CRNKL1	100	98.253	Carlito_syrichta
ENSSBOG00000029672	CRNKL1	95	94.992	ENSCAPG00000010501	CRNKL1	99	94.992	Cavia_aperea
ENSSBOG00000029672	CRNKL1	100	95.342	ENSCPOG00000004418	CRNKL1	100	95.342	Cavia_porcellus
ENSSBOG00000029672	CRNKL1	100	99.709	ENSCCAG00000027037	CRNKL1	100	99.709	Cebus_capucinus
ENSSBOG00000029672	CRNKL1	100	99.418	ENSCATG00000034247	CRNKL1	100	99.418	Cercocebus_atys
ENSSBOG00000029672	CRNKL1	100	95.779	ENSCLAG00000013859	CRNKL1	100	95.779	Chinchilla_lanigera
ENSSBOG00000029672	CRNKL1	100	99.418	ENSCSAG00000011434	CRNKL1	100	99.418	Chlorocebus_sabaeus
ENSSBOG00000029672	CRNKL1	100	96.361	ENSCHOG00000006371	CRNKL1	99	84.466	Choloepus_hoffmanni
ENSSBOG00000029672	CRNKL1	99	92.701	ENSCPBG00000023501	CRNKL1	99	92.701	Chrysemys_picta_bellii
ENSSBOG00000029672	CRNKL1	96	69.789	ENSCING00000002709	-	99	68.275	Ciona_intestinalis
ENSSBOG00000029672	CRNKL1	100	99.272	ENSCANG00000038789	CRNKL1	100	99.272	Colobus_angolensis_palliatus
ENSSBOG00000029672	CRNKL1	100	96.215	ENSCGRG00001001115	-	99	96.215	Cricetulus_griseus_chok1gshd
ENSSBOG00000029672	CRNKL1	100	96.215	ENSCGRG00001000687	-	99	96.215	Cricetulus_griseus_chok1gshd
ENSSBOG00000029672	CRNKL1	100	96.215	ENSCGRG00000007854	Crnkl1	99	96.215	Cricetulus_griseus_crigri
ENSSBOG00000029672	CRNKL1	99	85.862	ENSCSEG00000005594	crnkl1	85	86.310	Cynoglossus_semilaevis
ENSSBOG00000029672	CRNKL1	97	86.937	ENSCVAG00000015172	crnkl1	91	86.330	Cyprinodon_variegatus
ENSSBOG00000029672	CRNKL1	96	86.858	ENSDARG00000007901	crnkl1	91	85.234	Danio_rerio
ENSSBOG00000029672	CRNKL1	99	96.784	ENSDNOG00000016226	CRNKL1	95	96.784	Dasypus_novemcinctus
ENSSBOG00000029672	CRNKL1	100	94.517	ENSDORG00000000394	-	100	94.517	Dipodomys_ordii
ENSSBOG00000029672	CRNKL1	97	87.463	ENSDORG00000023724	-	99	87.463	Dipodomys_ordii
ENSSBOG00000029672	CRNKL1	97	87.015	ENSDORG00000030174	-	99	87.015	Dipodomys_ordii
ENSSBOG00000029672	CRNKL1	97	69.300	FBgn0000377	crn	96	69.300	Drosophila_melanogaster
ENSSBOG00000029672	CRNKL1	100	83.988	ENSETEG00000003711	CRNKL1	99	73.382	Echinops_telfairi
ENSSBOG00000029672	CRNKL1	99	58.364	ENSEBUG00000013461	crnkl1	96	58.555	Eptatretus_burgeri
ENSSBOG00000029672	CRNKL1	100	96.943	ENSEASG00005002072	CRNKL1	100	96.943	Equus_asinus_asinus
ENSSBOG00000029672	CRNKL1	100	96.943	ENSECAG00000022215	CRNKL1	100	96.943	Equus_caballus
ENSSBOG00000029672	CRNKL1	99	93.824	ENSEEUG00000000413	CRNKL1	100	87.366	Erinaceus_europaeus
ENSSBOG00000029672	CRNKL1	97	85.629	ENSELUG00000015424	crnkl1	96	84.897	Esox_lucius
ENSSBOG00000029672	CRNKL1	100	97.234	ENSFCAG00000000714	CRNKL1	100	97.234	Felis_catus
ENSSBOG00000029672	CRNKL1	98	91.518	ENSFALG00000004611	CRNKL1	100	91.518	Ficedula_albicollis
ENSSBOG00000029672	CRNKL1	100	95.488	ENSFDAG00000000604	CRNKL1	100	95.488	Fukomys_damarensis
ENSSBOG00000029672	CRNKL1	98	86.181	ENSFHEG00000013163	crnkl1	88	86.181	Fundulus_heteroclitus
ENSSBOG00000029672	CRNKL1	97	85.778	ENSGMOG00000007609	crnkl1	94	84.457	Gadus_morhua
ENSSBOG00000029672	CRNKL1	99	93.285	ENSGALG00000008429	CRNKL1	99	93.285	Gallus_gallus
ENSSBOG00000029672	CRNKL1	97	86.486	ENSGAFG00000014249	crnkl1	91	84.470	Gambusia_affinis
ENSSBOG00000029672	CRNKL1	99	84.571	ENSGACG00000011852	crnkl1	92	84.571	Gasterosteus_aculeatus
ENSSBOG00000029672	CRNKL1	95	91.463	ENSGAGG00000021233	CRNKL1	100	92.202	Gopherus_agassizii
ENSSBOG00000029672	CRNKL1	100	99.127	ENSGGOG00000014176	CRNKL1	100	99.127	Gorilla_gorilla
ENSSBOG00000029672	CRNKL1	99	87.149	ENSHBUG00000005246	crnkl1	90	87.149	Haplochromis_burtoni
ENSSBOG00000029672	CRNKL1	100	95.633	ENSHGLG00000010856	CRNKL1	100	95.633	Heterocephalus_glaber_female
ENSSBOG00000029672	CRNKL1	100	95.633	ENSHGLG00100011521	CRNKL1	100	95.633	Heterocephalus_glaber_male
ENSSBOG00000029672	CRNKL1	97	84.408	ENSHCOG00000006420	crnkl1	98	82.991	Hippocampus_comes
ENSSBOG00000029672	CRNKL1	97	75.489	ENSIPUG00000006836	-	98	74.926	Ictalurus_punctatus
ENSSBOG00000029672	CRNKL1	94	87.057	ENSIPUG00000006751	crnkl1	93	85.522	Ictalurus_punctatus
ENSSBOG00000029672	CRNKL1	93	68.760	ENSIPUG00000000315	-	100	69.969	Ictalurus_punctatus
ENSSBOG00000029672	CRNKL1	100	96.943	ENSSTOG00000014747	CRNKL1	100	96.943	Ictidomys_tridecemlineatus
ENSSBOG00000029672	CRNKL1	100	94.310	ENSJJAG00000016926	Crnkl1	100	94.310	Jaculus_jaculus
ENSSBOG00000029672	CRNKL1	99	85.735	ENSKMAG00000003620	crnkl1	88	85.735	Kryptolebias_marmoratus
ENSSBOG00000029672	CRNKL1	97	71.174	ENSLBEG00000003543	crnkl1	93	70.827	Labrus_bergylta
ENSSBOG00000029672	CRNKL1	99	87.555	ENSLACG00000001129	CRNKL1	99	87.555	Latimeria_chalumnae
ENSSBOG00000029672	CRNKL1	97	88.705	ENSLOCG00000016889	crnkl1	94	87.740	Lepisosteus_oculatus
ENSSBOG00000029672	CRNKL1	100	96.657	ENSLAFG00000004512	CRNKL1	100	96.657	Loxodonta_africana
ENSSBOG00000029672	CRNKL1	100	99.418	ENSMFAG00000039893	CRNKL1	100	99.418	Macaca_fascicularis
ENSSBOG00000029672	CRNKL1	100	99.418	ENSMMUG00000007709	CRNKL1	100	99.418	Macaca_mulatta
ENSSBOG00000029672	CRNKL1	100	99.418	ENSMNEG00000037490	CRNKL1	100	99.418	Macaca_nemestrina
ENSSBOG00000029672	CRNKL1	100	99.418	ENSMLEG00000034885	CRNKL1	100	99.418	Mandrillus_leucophaeus
ENSSBOG00000029672	CRNKL1	98	86.905	ENSMAMG00000008757	crnkl1	89	86.905	Mastacembelus_armatus
ENSSBOG00000029672	CRNKL1	99	87.297	ENSMZEG00005022345	crnkl1	90	87.297	Maylandia_zebra
ENSSBOG00000029672	CRNKL1	99	92.566	ENSMGAG00000003452	CRNKL1	94	92.566	Meleagris_gallopavo
ENSSBOG00000029672	CRNKL1	100	96.070	ENSMAUG00000020764	Crnkl1	99	96.070	Mesocricetus_auratus
ENSSBOG00000029672	CRNKL1	100	98.544	ENSMICG00000006048	CRNKL1	100	98.544	Microcebus_murinus
ENSSBOG00000029672	CRNKL1	100	88.126	ENSMOCG00000000681	-	99	88.126	Microtus_ochrogaster
ENSSBOG00000029672	CRNKL1	97	69.670	ENSMOCG00000004179	-	96	69.881	Microtus_ochrogaster
ENSSBOG00000029672	CRNKL1	92	85.578	ENSMMOG00000017601	crnkl1	97	85.578	Mola_mola
ENSSBOG00000029672	CRNKL1	100	91.379	ENSMODG00000005961	-	99	91.379	Monodelphis_domestica
ENSSBOG00000029672	CRNKL1	100	86.172	ENSMODG00000010857	-	99	86.172	Monodelphis_domestica
ENSSBOG00000029672	CRNKL1	99	62.292	ENSMALG00000011211	crnkl1	87	68.168	Monopterus_albus
ENSSBOG00000029672	CRNKL1	100	96.215	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.215	Mus_caroli
ENSSBOG00000029672	CRNKL1	100	96.215	ENSMUSG00000001767	Crnkl1	99	96.215	Mus_musculus
ENSSBOG00000029672	CRNKL1	100	94.760	MGP_PahariEiJ_G0025838	Crnkl1	99	94.760	Mus_pahari
ENSSBOG00000029672	CRNKL1	100	96.070	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.070	Mus_spretus
ENSSBOG00000029672	CRNKL1	100	97.380	ENSMPUG00000001226	CRNKL1	100	97.380	Mustela_putorius_furo
ENSSBOG00000029672	CRNKL1	100	96.221	ENSMLUG00000016513	CRNKL1	100	87.565	Myotis_lucifugus
ENSSBOG00000029672	CRNKL1	100	94.429	ENSNGAG00000023097	Crnkl1	100	94.429	Nannospalax_galili
ENSSBOG00000029672	CRNKL1	99	87.445	ENSNBRG00000007867	crnkl1	89	87.445	Neolamprologus_brichardi
ENSSBOG00000029672	CRNKL1	100	95.779	ENSNLEG00000009862	CRNKL1	100	96.788	Nomascus_leucogenys
ENSSBOG00000029672	CRNKL1	98	94.328	ENSMEUG00000012167	-	100	94.328	Notamacropus_eugenii
ENSSBOG00000029672	CRNKL1	100	84.884	ENSMEUG00000002361	-	99	84.884	Notamacropus_eugenii
ENSSBOG00000029672	CRNKL1	75	66.795	ENSOPRG00000009242	-	61	66.795	Ochotona_princeps
ENSSBOG00000029672	CRNKL1	100	95.488	ENSODEG00000012175	CRNKL1	100	95.488	Octodon_degus
ENSSBOG00000029672	CRNKL1	99	87.740	ENSONIG00000018728	crnkl1	89	87.740	Oreochromis_niloticus
ENSSBOG00000029672	CRNKL1	99	96.356	ENSOCUG00000015484	CRNKL1	99	84.383	Oryctolagus_cuniculus
ENSSBOG00000029672	CRNKL1	97	85.435	ENSORLG00000017240	crnkl1	94	81.724	Oryzias_latipes
ENSSBOG00000029672	CRNKL1	99	83.504	ENSORLG00020001742	crnkl1	92	83.504	Oryzias_latipes_hni
ENSSBOG00000029672	CRNKL1	97	85.586	ENSORLG00015019564	crnkl1	89	85.586	Oryzias_latipes_hsok
ENSSBOG00000029672	CRNKL1	99	84.526	ENSOMEG00000019895	crnkl1	91	84.526	Oryzias_melastigma
ENSSBOG00000029672	CRNKL1	100	98.690	ENSOGAG00000011544	CRNKL1	100	98.690	Otolemur_garnettii
ENSSBOG00000029672	CRNKL1	100	96.652	ENSOARG00000002150	CRNKL1	96	90.909	Ovis_aries
ENSSBOG00000029672	CRNKL1	100	97.817	ENSPPAG00000027847	CRNKL1	99	89.049	Pan_paniscus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSPPRG00000001955	CRNKL1	100	97.234	Panthera_pardus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSPTIG00000007393	CRNKL1	100	97.234	Panthera_tigris_altaica
ENSSBOG00000029672	CRNKL1	100	98.981	ENSPTRG00000030609	CRNKL1	100	98.981	Pan_troglodytes
ENSSBOG00000029672	CRNKL1	100	99.418	ENSPANG00000017420	CRNKL1	100	99.418	Papio_anubis
ENSSBOG00000029672	CRNKL1	96	81.955	ENSPKIG00000017093	crnkl1	88	81.657	Paramormyrops_kingsleyae
ENSSBOG00000029672	CRNKL1	99	91.508	ENSPSIG00000012705	CRNKL1	99	91.508	Pelodiscus_sinensis
ENSSBOG00000029672	CRNKL1	99	78.971	ENSPMGG00000006263	crnkl1	96	78.971	Periophthalmus_magnuspinnatus
ENSSBOG00000029672	CRNKL1	100	96.361	ENSPEMG00000000073	-	99	96.361	Peromyscus_maniculatus_bairdii
ENSSBOG00000029672	CRNKL1	99	81.686	ENSPMAG00000002250	crnkl1	99	81.686	Petromyzon_marinus
ENSSBOG00000029672	CRNKL1	100	93.741	ENSPCIG00000025825	CRNKL1	96	93.741	Phascolarctos_cinereus
ENSSBOG00000029672	CRNKL1	97	86.336	ENSPFOG00000005102	crnkl1	94	84.226	Poecilia_formosa
ENSSBOG00000029672	CRNKL1	97	86.336	ENSPLAG00000007288	crnkl1	90	84.104	Poecilia_latipinna
ENSSBOG00000029672	CRNKL1	97	86.486	ENSPMEG00000008865	crnkl1	94	84.370	Poecilia_mexicana
ENSSBOG00000029672	CRNKL1	97	86.036	ENSPREG00000012615	crnkl1	92	84.357	Poecilia_reticulata
ENSSBOG00000029672	CRNKL1	100	99.127	ENSPPYG00000010747	CRNKL1	99	89.311	Pongo_abelii
ENSSBOG00000029672	CRNKL1	99	90.882	ENSPCAG00000003296	CRNKL1	99	80.446	Procavia_capensis
ENSSBOG00000029672	CRNKL1	100	97.234	ENSPCOG00000017608	CRNKL1	99	85.714	Propithecus_coquereli
ENSSBOG00000029672	CRNKL1	100	97.380	ENSPVAG00000006207	CRNKL1	99	86.861	Pteropus_vampyrus
ENSSBOG00000029672	CRNKL1	99	87.149	ENSPNYG00000001977	crnkl1	90	87.149	Pundamilia_nyererei
ENSSBOG00000029672	CRNKL1	98	88.060	ENSPNAG00000001507	crnkl1	98	83.552	Pygocentrus_nattereri
ENSSBOG00000029672	CRNKL1	100	96.215	ENSRNOG00000010587	Crnkl1	99	96.215	Rattus_norvegicus
ENSSBOG00000029672	CRNKL1	100	95.779	ENSRNOG00000040045	Crnkl1	99	95.779	Rattus_norvegicus
ENSSBOG00000029672	CRNKL1	100	99.272	ENSRBIG00000031770	CRNKL1	100	99.272	Rhinopithecus_bieti
ENSSBOG00000029672	CRNKL1	100	99.127	ENSRROG00000040450	CRNKL1	100	99.127	Rhinopithecus_roxellana
ENSSBOG00000029672	CRNKL1	94	37.536	YLR117C	CLF1	99	37.627	Saccharomyces_cerevisiae
ENSSBOG00000029672	CRNKL1	96	74.810	ENSSHAG00000011199	CRNKL1	99	74.810	Sarcophilus_harrisii
ENSSBOG00000029672	CRNKL1	96	87.009	ENSSFOG00015000946	crnkl1	89	85.234	Scleropages_formosus
ENSSBOG00000029672	CRNKL1	99	84.548	ENSSMAG00000007933	crnkl1	89	84.548	Scophthalmus_maximus
ENSSBOG00000029672	CRNKL1	99	79.794	ENSSDUG00000012625	crnkl1	87	79.794	Seriola_dumerili
ENSSBOG00000029672	CRNKL1	99	86.558	ENSSLDG00000021413	crnkl1	88	86.558	Seriola_lalandi_dorsalis
ENSSBOG00000029672	CRNKL1	100	96.215	ENSSARG00000006443	CRNKL1	98	83.863	Sorex_araneus
ENSSBOG00000029672	CRNKL1	99	92.094	ENSSPUG00000005254	CRNKL1	99	92.094	Sphenodon_punctatus
ENSSBOG00000029672	CRNKL1	99	86.131	ENSSPAG00000016150	crnkl1	89	86.131	Stegastes_partitus
ENSSBOG00000029672	CRNKL1	100	96.943	ENSSSCG00000038587	CRNKL1	99	96.943	Sus_scrofa
ENSSBOG00000029672	CRNKL1	99	91.691	ENSTGUG00000007645	CRNKL1	98	91.691	Taeniopygia_guttata
ENSSBOG00000029672	CRNKL1	98	80.448	ENSTRUG00000015417	crnkl1	91	79.502	Takifugu_rubripes
ENSSBOG00000029672	CRNKL1	97	84.858	ENSTNIG00000010710	crnkl1	99	83.382	Tetraodon_nigroviridis
ENSSBOG00000029672	CRNKL1	92	96.835	ENSTBEG00000001304	CRNKL1	99	81.747	Tupaia_belangeri
ENSSBOG00000029672	CRNKL1	91	93.280	ENSTTRG00000000484	CRNKL1	98	81.332	Tursiops_truncatus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSUAMG00000018586	CRNKL1	100	97.234	Ursus_americanus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSUMAG00000024957	CRNKL1	100	97.234	Ursus_maritimus
ENSSBOG00000029672	CRNKL1	100	97.234	ENSVVUG00000012559	CRNKL1	98	85.539	Vulpes_vulpes
ENSSBOG00000029672	CRNKL1	99	89.811	ENSXETG00000009698	crnkl1	99	89.811	Xenopus_tropicalis
ENSSBOG00000029672	CRNKL1	97	85.607	ENSXCOG00000000824	crnkl1	91	84.041	Xiphophorus_couchianus
ENSSBOG00000029672	CRNKL1	97	86.486	ENSXMAG00000006896	crnkl1	91	84.897	Xiphophorus_maculatus