EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000029728 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 1350 bases
Position: chrJH378197.1:7404510-7405859
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	1	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	2	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	3	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	4	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	5	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	6	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	7	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	8	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	9	10
ENSSBOP00000026590	zf-C2H2	PF00096.26	1e-57	10	10
ENSSBOP00000026590	zf-met	PF12874.7	5.4e-07	1	2
ENSSBOP00000026590	zf-met	PF12874.7	5.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043463	-	1035	XM_003937411	ENSSBOP00000026590	345 (aa)	XP_003937460	A0A2K6U3W3

Gene Model

Click here to download ENSSBOG00000029728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000029728	-	86	59.589	ENSSBOG00000029886	ZNF836	83	59.589
ENSSBOG00000029728	-	90	57.576	ENSSBOG00000021951	ZNF772	83	57.576
ENSSBOG00000029728	-	88	62.911	ENSSBOG00000020206	ZFP1	88	62.911
ENSSBOG00000029728	-	86	58.188	ENSSBOG00000024486	ZNF791	90	58.188
ENSSBOG00000029728	-	97	60.526	ENSSBOG00000030730	ZNF2	87	60.526
ENSSBOG00000029728	-	90	62.500	ENSSBOG00000027061	ZNF829	75	62.500
ENSSBOG00000029728	-	86	41.429	ENSSBOG00000018861	ZNF319	91	41.429
ENSSBOG00000029728	-	85	55.801	ENSSBOG00000018054	ZNF317	77	55.801
ENSSBOG00000029728	-	85	37.048	ENSSBOG00000027597	ZNF574	84	37.651
ENSSBOG00000029728	-	86	56.446	ENSSBOG00000023651	ZNF112	74	56.446
ENSSBOG00000029728	-	94	55.967	ENSSBOG00000029619	ZFP69B	72	51.077
ENSSBOG00000029728	-	91	57.241	ENSSBOG00000028208	ZNF418	97	57.241
ENSSBOG00000029728	-	92	58.562	ENSSBOG00000028573	-	86	58.562
ENSSBOG00000029728	-	85	41.065	ENSSBOG00000022100	PRDM5	83	41.065
ENSSBOG00000029728	-	100	57.192	ENSSBOG00000028285	ZNF235	71	57.192
ENSSBOG00000029728	-	95	58.219	ENSSBOG00000020798	ZNF81	80	58.219
ENSSBOG00000029728	-	85	49.682	ENSSBOG00000018893	GZF1	56	49.682
ENSSBOG00000029728	-	85	54.167	ENSSBOG00000019663	ZNF768	61	54.167
ENSSBOG00000029728	-	86	54.595	ENSSBOG00000025431	ZNF564	86	54.595
ENSSBOG00000029728	-	90	56.507	ENSSBOG00000025050	ZNF226	77	56.507
ENSSBOG00000029728	-	100	70.034	ENSSBOG00000022380	-	88	70.034
ENSSBOG00000029728	-	95	59.414	ENSSBOG00000022450	-	96	59.414
ENSSBOG00000029728	-	100	64.151	ENSSBOG00000024080	ZNF582	71	64.151

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029728	-	85	56.818	ENSACIG00000011153	-	75	53.846	Amphilophus_citrinellus
ENSSBOG00000029728	-	85	57.986	ENSACIG00000019791	-	92	57.589	Amphilophus_citrinellus
ENSSBOG00000029728	-	97	56.746	ENSANAG00000032414	-	93	56.746	Aotus_nancymaae
ENSSBOG00000029728	-	85	51.101	ENSACLG00000020474	-	84	51.101	Astatotilapia_calliptera
ENSSBOG00000029728	-	88	46.975	ENSACLG00000014167	-	73	46.975	Astatotilapia_calliptera
ENSSBOG00000029728	-	84	47.241	ENSACLG00000017329	-	81	47.241	Astatotilapia_calliptera
ENSSBOG00000029728	-	87	45.701	ENSACLG00000001507	-	76	45.701	Astatotilapia_calliptera
ENSSBOG00000029728	-	88	47.368	ENSACLG00000022499	-	86	47.368	Astatotilapia_calliptera
ENSSBOG00000029728	-	86	62.673	ENSAMXG00000031646	-	94	62.673	Astyanax_mexicanus
ENSSBOG00000029728	-	85	59.589	ENSAMXG00000039162	-	94	59.589	Astyanax_mexicanus
ENSSBOG00000029728	-	85	57.241	ENSAMXG00000039770	-	83	57.241	Astyanax_mexicanus
ENSSBOG00000029728	-	92	58.824	ENSAMXG00000038324	-	86	58.824	Astyanax_mexicanus
ENSSBOG00000029728	-	84	58.175	ENSAMXG00000036849	-	78	58.175	Astyanax_mexicanus
ENSSBOG00000029728	-	85	55.357	ENSAMXG00000031844	-	91	55.357	Astyanax_mexicanus
ENSSBOG00000029728	-	86	61.301	ENSAMXG00000031501	-	86	61.301	Astyanax_mexicanus
ENSSBOG00000029728	-	86	59.582	ENSAMXG00000010078	-	85	59.582	Astyanax_mexicanus
ENSSBOG00000029728	-	86	53.759	ENSCHIG00000015741	-	90	53.759	Capra_hircus
ENSSBOG00000029728	-	100	91.014	ENSCCAG00000035188	-	100	91.014	Cebus_capucinus
ENSSBOG00000029728	-	86	56.250	ENSCPBG00000001258	-	99	56.250	Chrysemys_picta_bellii
ENSSBOG00000029728	-	86	57.083	ENSDNOG00000048084	-	99	57.083	Dasypus_novemcinctus
ENSSBOG00000029728	-	85	53.008	ENSETEG00000002865	-	85	53.008	Echinops_telfairi
ENSSBOG00000029728	-	85	55.556	ENSEBUG00000011479	-	70	55.556	Eptatretus_burgeri
ENSSBOG00000029728	-	85	48.571	ENSEBUG00000011582	-	72	48.571	Eptatretus_burgeri
ENSSBOG00000029728	-	85	56.034	ENSEBUG00000008157	-	100	56.034	Eptatretus_burgeri
ENSSBOG00000029728	-	86	56.522	ENSEBUG00000012748	-	69	56.522	Eptatretus_burgeri
ENSSBOG00000029728	-	86	55.782	ENSECAG00000035557	-	74	55.782	Equus_caballus
ENSSBOG00000029728	-	85	45.000	ENSFHEG00000016184	-	74	45.000	Fundulus_heteroclitus
ENSSBOG00000029728	-	84	48.333	ENSGMOG00000004315	-	95	48.333	Gadus_morhua
ENSSBOG00000029728	-	85	45.455	ENSGACG00000019863	-	98	45.455	Gasterosteus_aculeatus
ENSSBOG00000029728	-	85	63.878	ENSGAGG00000007230	-	82	63.878	Gopherus_agassizii
ENSSBOG00000029728	-	85	59.655	ENSGAGG00000013851	-	78	59.655	Gopherus_agassizii
ENSSBOG00000029728	-	85	56.796	ENSHBUG00000000146	-	78	56.796	Haplochromis_burtoni
ENSSBOG00000029728	-	85	44.318	ENSHBUG00000006238	-	94	44.318	Haplochromis_burtoni
ENSSBOG00000029728	-	85	44.828	ENSHBUG00000013264	-	88	44.828	Haplochromis_burtoni
ENSSBOG00000029728	-	88	49.767	ENSHBUG00000019800	-	97	49.767	Haplochromis_burtoni
ENSSBOG00000029728	-	86	52.692	ENSHBUG00000017372	-	87	53.358	Haplochromis_burtoni
ENSSBOG00000029728	-	84	53.191	ENSHBUG00000021028	-	93	47.588	Haplochromis_burtoni
ENSSBOG00000029728	-	95	54.580	ENSHGLG00000018394	-	99	54.580	Heterocephalus_glaber_female
ENSSBOG00000029728	-	86	57.143	ENSIPUG00000013065	-	93	55.024	Ictalurus_punctatus
ENSSBOG00000029728	-	85	53.591	ENSIPUG00000021518	-	87	54.468	Ictalurus_punctatus
ENSSBOG00000029728	-	84	52.525	ENSIPUG00000021434	-	95	52.525	Ictalurus_punctatus
ENSSBOG00000029728	-	87	52.229	ENSIPUG00000021527	-	91	53.608	Ictalurus_punctatus
ENSSBOG00000029728	-	85	59.459	ENSIPUG00000021484	-	98	59.459	Ictalurus_punctatus
ENSSBOG00000029728	-	85	57.838	ENSIPUG00000009750	-	77	57.838	Ictalurus_punctatus
ENSSBOG00000029728	-	85	54.194	ENSIPUG00000006936	-	80	52.896	Ictalurus_punctatus
ENSSBOG00000029728	-	85	58.768	ENSIPUG00000003960	-	75	58.768	Ictalurus_punctatus
ENSSBOG00000029728	-	82	56.021	ENSIPUG00000021472	-	80	56.021	Ictalurus_punctatus
ENSSBOG00000029728	-	100	52.632	ENSIPUG00000015233	-	72	52.632	Ictalurus_punctatus
ENSSBOG00000029728	-	94	54.266	ENSIPUG00000022751	-	98	57.143	Ictalurus_punctatus
ENSSBOG00000029728	-	85	53.138	ENSIPUG00000001941	-	83	53.138	Ictalurus_punctatus
ENSSBOG00000029728	-	86	56.633	ENSIPUG00000011073	-	97	56.633	Ictalurus_punctatus
ENSSBOG00000029728	-	85	57.586	ENSSTOG00000034297	-	70	57.586	Ictidomys_tridecemlineatus
ENSSBOG00000029728	-	100	97.681	ENSMFAG00000046052	-	100	97.681	Macaca_fascicularis
ENSSBOG00000029728	-	100	97.391	ENSMNEG00000041636	-	100	97.391	Macaca_nemestrina
ENSSBOG00000029728	-	100	97.681	ENSMLEG00000032640	-	100	97.681	Mandrillus_leucophaeus
ENSSBOG00000029728	-	89	43.781	ENSMAMG00000009051	-	88	46.012	Mastacembelus_armatus
ENSSBOG00000029728	-	84	50.000	ENSMZEG00005021421	-	95	50.000	Maylandia_zebra
ENSSBOG00000029728	-	86	45.902	ENSMZEG00005027950	-	90	45.902	Maylandia_zebra
ENSSBOG00000029728	-	87	49.110	ENSMZEG00005027285	-	82	49.110	Maylandia_zebra
ENSSBOG00000029728	-	99	45.183	ENSMZEG00005019982	-	97	45.183	Maylandia_zebra
ENSSBOG00000029728	-	88	47.541	ENSMZEG00005012737	-	80	47.541	Maylandia_zebra
ENSSBOG00000029728	-	86	45.756	ENSMZEG00005020736	-	91	45.570	Maylandia_zebra
ENSSBOG00000029728	-	85	53.962	ENSMALG00000004413	-	93	53.962	Monopterus_albus
ENSSBOG00000029728	-	92	49.213	ENSNBRG00000015652	-	91	49.213	Neolamprologus_brichardi
ENSSBOG00000029728	-	85	59.259	ENSNBRG00000015873	-	94	54.902	Neolamprologus_brichardi
ENSSBOG00000029728	-	85	53.731	ENSNBRG00000013604	-	76	53.731	Neolamprologus_brichardi
ENSSBOG00000029728	-	89	47.895	ENSNBRG00000016603	-	90	47.895	Neolamprologus_brichardi
ENSSBOG00000029728	-	87	45.763	ENSNBRG00000016582	-	83	45.848	Neolamprologus_brichardi
ENSSBOG00000029728	-	88	41.503	ENSONIG00000007931	-	85	41.503	Oreochromis_niloticus
ENSSBOG00000029728	-	84	47.788	ENSONIG00000000093	-	99	43.279	Oreochromis_niloticus
ENSSBOG00000029728	-	85	55.172	ENSONIG00000020516	-	96	55.172	Oreochromis_niloticus
ENSSBOG00000029728	-	95	49.519	ENSONIG00000021124	-	99	49.519	Oreochromis_niloticus
ENSSBOG00000029728	-	84	46.570	ENSONIG00000000122	-	100	46.570	Oreochromis_niloticus
ENSSBOG00000029728	-	85	49.286	ENSONIG00000001834	-	99	41.558	Oreochromis_niloticus
ENSSBOG00000029728	-	88	47.500	ENSONIG00000015166	-	100	47.500	Oreochromis_niloticus
ENSSBOG00000029728	-	88	40.062	ENSONIG00000008953	-	97	40.062	Oreochromis_niloticus
ENSSBOG00000029728	-	85	58.537	ENSORLG00015012951	-	79	55.224	Oryzias_latipes_hsok
ENSSBOG00000029728	-	100	66.781	ENSOGAG00000025289	-	88	67.808	Otolemur_garnettii
ENSSBOG00000029728	-	91	97.134	ENSPANG00000030978	-	96	97.134	Papio_anubis
ENSSBOG00000029728	-	99	56.272	ENSPEMG00000016975	Zfp940	80	56.272	Peromyscus_maniculatus_bairdii
ENSSBOG00000029728	-	99	51.536	ENSPMEG00000004595	-	91	53.767	Poecilia_mexicana
ENSSBOG00000029728	-	100	65.797	ENSPPYG00000009906	-	71	65.797	Pongo_abelii
ENSSBOG00000029728	-	85	43.111	ENSPNYG00000024244	-	85	43.111	Pundamilia_nyererei
ENSSBOG00000029728	-	87	58.537	ENSPNAG00000019338	-	98	58.537	Pygocentrus_nattereri
ENSSBOG00000029728	-	85	60.369	ENSPNAG00000011625	-	86	60.369	Pygocentrus_nattereri
ENSSBOG00000029728	-	88	63.793	ENSSPUG00000010059	-	87	64.726	Sphenodon_punctatus