EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000029743 (Gene tree)
Gene ID: 101035067
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 79559 bases
Position: chrJH378157.1:9316029-9395587
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026940	Ago_hook	PF10427.9	1.1e-20	1	1
ENSSBOP00000026935	Ago_hook	PF10427.9	1.6e-19	1	1
ENSSBOP00000026916	Ago_hook	PF10427.9	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043811	TNRC6B-202	5457	-	ENSSBOP00000026935	1818 (aa)	-	A0A2K6U4V5
ENSSBOT00000043816	TNRC6B-203	3003	-	ENSSBOP00000026940	1000 (aa)	-	A0A2K6U4W0
ENSSBOT00000043792	TNRC6B-201	5537	XM_010343423	ENSSBOP00000026916	1711 (aa)	XP_010341725	A0A2K6U4S7

Gene Model

Click here to download ENSSBOG00000029743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000029743	TNRC6B	92	54.054	ENSSBOG00000023981	TNRC6C	98	36.687
ENSSBOG00000029743	TNRC6B	94	46.739	ENSSBOG00000036197	TNRC6A	99	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029743	TNRC6B	100	99.357	ENSG00000100354	TNRC6B	99	99.357	Homo_sapiens
ENSSBOG00000029743	TNRC6B	99	96.360	ENSAMEG00000011025	TNRC6B	97	97.371	Ailuropoda_melanoleuca
ENSSBOG00000029743	TNRC6B	99	88.301	ENSAPLG00000009347	TNRC6B	100	88.301	Anas_platyrhynchos
ENSSBOG00000029743	TNRC6B	96	85.579	ENSACAG00000007281	TNRC6B	99	71.161	Anolis_carolinensis
ENSSBOG00000029743	TNRC6B	100	99.591	ENSANAG00000035042	TNRC6B	99	99.591	Aotus_nancymaae
ENSSBOG00000029743	TNRC6B	89	79.032	ENSAMXG00000008707	tnrc6b	82	44.464	Astyanax_mexicanus
ENSSBOG00000029743	TNRC6B	100	96.270	ENSBTAG00000021076	TNRC6B	99	96.270	Bos_taurus
ENSSBOG00000029743	TNRC6B	99	97.745	ENSCJAG00000002732	TNRC6B	100	100.000	Callithrix_jacchus
ENSSBOG00000029743	TNRC6B	100	97.203	ENSCAFG00000001255	TNRC6B	99	97.203	Canis_familiaris
ENSSBOG00000029743	TNRC6B	100	93.669	ENSCAFG00020002189	TNRC6B	99	95.207	Canis_lupus_dingo
ENSSBOG00000029743	TNRC6B	100	93.556	ENSCHIG00000003491	TNRC6B	99	92.728	Capra_hircus
ENSSBOG00000029743	TNRC6B	100	98.189	ENSTSYG00000011836	TNRC6B	99	98.189	Carlito_syrichta
ENSSBOG00000029743	TNRC6B	100	96.682	ENSCPOG00000005705	TNRC6B	97	96.682	Cavia_porcellus
ENSSBOG00000029743	TNRC6B	100	97.145	ENSCCAG00000019912	TNRC6B	99	97.145	Cebus_capucinus
ENSSBOG00000029743	TNRC6B	99	96.920	ENSCATG00000029291	TNRC6B	99	96.920	Cercocebus_atys
ENSSBOG00000029743	TNRC6B	100	94.124	ENSCLAG00000016942	TNRC6B	98	93.277	Chinchilla_lanigera
ENSSBOG00000029743	TNRC6B	99	91.719	ENSCSAG00000006021	TNRC6B	99	91.074	Chlorocebus_sabaeus
ENSSBOG00000029743	TNRC6B	63	98.901	ENSCHOG00000010004	-	62	98.901	Choloepus_hoffmanni
ENSSBOG00000029743	TNRC6B	91	87.331	ENSCPBG00000022932	TNRC6B	98	87.038	Chrysemys_picta_bellii
ENSSBOG00000029743	TNRC6B	100	98.599	ENSCANG00000030776	TNRC6B	99	98.599	Colobus_angolensis_palliatus
ENSSBOG00000029743	TNRC6B	93	95.134	ENSCGRG00001020166	Tnrc6b	96	91.884	Cricetulus_griseus_chok1gshd
ENSSBOG00000029743	TNRC6B	100	95.283	ENSCGRG00000016696	Tnrc6b	98	92.080	Cricetulus_griseus_crigri
ENSSBOG00000029743	TNRC6B	96	98.230	ENSDNOG00000012744	TNRC6B	98	94.887	Dasypus_novemcinctus
ENSSBOG00000029743	TNRC6B	100	94.334	ENSDORG00000003386	Tnrc6b	95	96.612	Dipodomys_ordii
ENSSBOG00000029743	TNRC6B	99	88.052	ENSETEG00000006570	TNRC6B	98	88.464	Echinops_telfairi
ENSSBOG00000029743	TNRC6B	100	96.268	ENSEASG00005005306	TNRC6B	99	96.268	Equus_asinus_asinus
ENSSBOG00000029743	TNRC6B	96	99.500	ENSECAG00000009759	TNRC6B	99	99.500	Equus_caballus
ENSSBOG00000029743	TNRC6B	74	97.436	ENSEEUG00000008690	-	61	97.436	Erinaceus_europaeus
ENSSBOG00000029743	TNRC6B	54	63.907	ENSELUG00000019468	-	71	63.816	Esox_lucius
ENSSBOG00000029743	TNRC6B	99	96.044	ENSFCAG00000004791	TNRC6B	98	96.992	Felis_catus
ENSSBOG00000029743	TNRC6B	91	91.253	ENSFALG00000012195	TNRC6B	100	84.607	Ficedula_albicollis
ENSSBOG00000029743	TNRC6B	100	94.404	ENSFDAG00000021368	TNRC6B	97	93.672	Fukomys_damarensis
ENSSBOG00000029743	TNRC6B	96	91.598	ENSGALG00000012050	TNRC6B	96	85.527	Gallus_gallus
ENSSBOG00000029743	TNRC6B	98	88.982	ENSGAGG00000025188	TNRC6B	96	88.592	Gopherus_agassizii
ENSSBOG00000029743	TNRC6B	100	99.299	ENSGGOG00000008444	TNRC6B	99	99.299	Gorilla_gorilla
ENSSBOG00000029743	TNRC6B	98	96.993	ENSHGLG00000009306	TNRC6B	99	96.993	Heterocephalus_glaber_female
ENSSBOG00000029743	TNRC6B	100	94.391	ENSHGLG00100018108	TNRC6B	98	93.711	Heterocephalus_glaber_male
ENSSBOG00000029743	TNRC6B	88	79.365	ENSIPUG00000001515	tnrc6b	90	50.138	Ictalurus_punctatus
ENSSBOG00000029743	TNRC6B	100	94.674	ENSSTOG00000008927	TNRC6B	97	94.343	Ictidomys_tridecemlineatus
ENSSBOG00000029743	TNRC6B	96	95.868	ENSJJAG00000015779	Tnrc6b	97	92.071	Jaculus_jaculus
ENSSBOG00000029743	TNRC6B	96	67.164	ENSLACG00000000628	-	99	59.879	Latimeria_chalumnae
ENSSBOG00000029743	TNRC6B	84	96.213	ENSLAFG00000014473	TNRC6B	100	96.655	Loxodonta_africana
ENSSBOG00000029743	TNRC6B	100	98.462	ENSMFAG00000003862	TNRC6B	99	97.030	Macaca_fascicularis
ENSSBOG00000029743	TNRC6B	100	98.832	ENSMMUG00000021345	TNRC6B	99	98.832	Macaca_mulatta
ENSSBOG00000029743	TNRC6B	100	98.774	ENSMNEG00000042745	TNRC6B	100	98.774	Macaca_nemestrina
ENSSBOG00000029743	TNRC6B	100	98.832	ENSMLEG00000041780	TNRC6B	99	98.832	Mandrillus_leucophaeus
ENSSBOG00000029743	TNRC6B	98	89.353	ENSMGAG00000012333	TNRC6B	98	89.019	Meleagris_gallopavo
ENSSBOG00000029743	TNRC6B	96	95.283	ENSMAUG00000016123	Tnrc6b	97	91.966	Mesocricetus_auratus
ENSSBOG00000029743	TNRC6B	100	98.192	ENSMICG00000014056	TNRC6B	99	98.192	Microcebus_murinus
ENSSBOG00000029743	TNRC6B	95	96.000	ENSMOCG00000020334	Tnrc6b	96	96.000	Microtus_ochrogaster
ENSSBOG00000029743	TNRC6B	67	80.645	ENSMMOG00000002799	si:dkey-217f16.6	59	69.388	Mola_mola
ENSSBOG00000029743	TNRC6B	96	95.755	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	91.966	Mus_caroli
ENSSBOG00000029743	TNRC6B	96	95.873	ENSMUSG00000047888	Tnrc6b	99	94.606	Mus_musculus
ENSSBOG00000029743	TNRC6B	99	92.018	MGP_PahariEiJ_G0020045	Tnrc6b	97	91.733	Mus_pahari
ENSSBOG00000029743	TNRC6B	99	94.566	MGP_SPRETEiJ_G0020941	Tnrc6b	97	94.566	Mus_spretus
ENSSBOG00000029743	TNRC6B	98	98.473	ENSMPUG00000016442	TNRC6B	98	90.309	Mustela_putorius_furo
ENSSBOG00000029743	TNRC6B	99	95.487	ENSMLUG00000008765	TNRC6B	99	95.487	Myotis_lucifugus
ENSSBOG00000029743	TNRC6B	100	92.777	ENSNGAG00000021294	Tnrc6b	97	92.316	Nannospalax_galili
ENSSBOG00000029743	TNRC6B	96	99.686	ENSNLEG00000015311	TNRC6B	94	99.256	Nomascus_leucogenys
ENSSBOG00000029743	TNRC6B	94	97.321	ENSOPRG00000012054	TNRC6B	87	94.394	Ochotona_princeps
ENSSBOG00000029743	TNRC6B	100	94.523	ENSODEG00000013146	TNRC6B	97	93.793	Octodon_degus
ENSSBOG00000029743	TNRC6B	92	68.354	ENSONIG00000019679	-	97	48.322	Oreochromis_niloticus
ENSSBOG00000029743	TNRC6B	96	98.246	ENSOCUG00000016128	TNRC6B	97	93.598	Oryctolagus_cuniculus
ENSSBOG00000029743	TNRC6B	100	96.550	ENSOGAG00000011096	TNRC6B	99	96.550	Otolemur_garnettii
ENSSBOG00000029743	TNRC6B	100	93.191	ENSOARG00000017238	TNRC6B	97	92.909	Ovis_aries
ENSSBOG00000029743	TNRC6B	100	99.241	ENSPPAG00000028514	TNRC6B	99	99.241	Pan_paniscus
ENSSBOG00000029743	TNRC6B	100	97.430	ENSPPRG00000017741	TNRC6B	99	97.430	Panthera_pardus
ENSSBOG00000029743	TNRC6B	99	92.485	ENSPTIG00000022064	TNRC6B	98	94.128	Panthera_tigris_altaica
ENSSBOG00000029743	TNRC6B	100	99.182	ENSPTRG00000047826	TNRC6B	99	99.182	Pan_troglodytes
ENSSBOG00000029743	TNRC6B	98	93.298	ENSPANG00000009271	TNRC6B	99	93.590	Papio_anubis
ENSSBOG00000029743	TNRC6B	96	90.000	ENSPSIG00000005318	TNRC6B	99	85.003	Pelodiscus_sinensis
ENSSBOG00000029743	TNRC6B	99	91.923	ENSPEMG00000011403	Tnrc6b	97	91.695	Peromyscus_maniculatus_bairdii
ENSSBOG00000029743	TNRC6B	96	91.745	ENSPCIG00000020347	TNRC6B	98	87.305	Phascolarctos_cinereus
ENSSBOG00000029743	TNRC6B	87	82.927	ENSPFOG00000006033	-	95	43.754	Poecilia_formosa
ENSSBOG00000029743	TNRC6B	89	69.863	ENSPLAG00000001418	-	51	72.727	Poecilia_latipinna
ENSSBOG00000029743	TNRC6B	100	98.890	ENSPPYG00000011849	TNRC6B	99	98.890	Pongo_abelii
ENSSBOG00000029743	TNRC6B	92	87.452	ENSPCAG00000008739	TNRC6B	75	91.331	Procavia_capensis
ENSSBOG00000029743	TNRC6B	100	98.251	ENSPCOG00000020790	TNRC6B	99	98.251	Propithecus_coquereli
ENSSBOG00000029743	TNRC6B	91	95.910	ENSPVAG00000004975	TNRC6B	90	95.910	Pteropus_vampyrus
ENSSBOG00000029743	TNRC6B	81	58.252	ENSPNAG00000011713	tnrc6b	80	42.321	Pygocentrus_nattereri
ENSSBOG00000029743	TNRC6B	99	91.719	ENSRNOG00000024907	Tnrc6b	97	91.492	Rattus_norvegicus
ENSSBOG00000029743	TNRC6B	100	98.599	ENSRBIG00000035576	TNRC6B	99	98.599	Rhinopithecus_bieti
ENSSBOG00000029743	TNRC6B	100	98.541	ENSRROG00000031135	TNRC6B	100	98.541	Rhinopithecus_roxellana
ENSSBOG00000029743	TNRC6B	98	87.584	ENSSHAG00000009692	TNRC6B	98	87.361	Sarcophilus_harrisii
ENSSBOG00000029743	TNRC6B	76	86.057	ENSSARG00000007971	-	73	84.802	Sorex_araneus
ENSSBOG00000029743	TNRC6B	92	88.546	ENSSPUG00000010801	TNRC6B	100	88.190	Sphenodon_punctatus
ENSSBOG00000029743	TNRC6B	99	96.139	ENSSSCG00000000078	TNRC6B	97	98.495	Sus_scrofa
ENSSBOG00000029743	TNRC6B	92	87.980	ENSTGUG00000010138	-	98	87.665	Taeniopygia_guttata
ENSSBOG00000029743	TNRC6B	99	94.107	ENSTTRG00000011465	TNRC6B	93	98.325	Tursiops_truncatus
ENSSBOG00000029743	TNRC6B	99	96.487	ENSUAMG00000007174	TNRC6B	99	96.487	Ursus_americanus
ENSSBOG00000029743	TNRC6B	100	94.394	ENSUMAG00000014336	TNRC6B	100	93.794	Ursus_maritimus
ENSSBOG00000029743	TNRC6B	76	98.148	ENSVPAG00000001467	TNRC6B	71	91.210	Vicugna_pacos
ENSSBOG00000029743	TNRC6B	100	97.145	ENSVVUG00000007064	TNRC6B	97	97.145	Vulpes_vulpes
ENSSBOG00000029743	TNRC6B	74	49.744	ENSXCOG00000003042	-	65	31.086	Xiphophorus_couchianus