EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030005 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 22407 bases
Position: chrJH378157.1:10475114-10497520
Accession: 24100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000027158	APOBEC_N	PF08210.11	3.3e-36	1	1
ENSSBOP00000027153	APOBEC_N	PF08210.11	7.3e-36	1	1
ENSSBOP00000027148	APOBEC_N	PF08210.11	9.2e-29	1	1
ENSSBOP00000027158	APOBEC_C	PF05240.14	6.5e-26	1	1
ENSSBOP00000027153	APOBEC_C	PF05240.14	1.2e-25	1	1
ENSSBOP00000027148	APOBEC_C	PF05240.14	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000044034	APOBEC3H-203	631	-	ENSSBOP00000027158	183 (aa)	-	A0A2K6U5I1
ENSSBOT00000044024	APOBEC3H-201	958	XM_010343583	ENSSBOP00000027148	141 (aa)	XP_010341885	A0A2K6U5H2
ENSSBOT00000044029	APOBEC3H-202	2098	-	ENSSBOP00000027153	237 (aa)	-	A0A2K6U5H6

Gene Model

Click here to download ENSSBOG00000030005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030005	APOBEC3H	98	37.306	ENSSBOG00000023468	-	74	37.306
ENSSBOG00000030005	APOBEC3H	79	30.357	ENSSBOG00000030587	APOBEC1	72	32.061
ENSSBOG00000030005	APOBEC3H	96	43.636	ENSSBOG00000026566	-	75	36.788
ENSSBOG00000030005	APOBEC3H	99	33.862	ENSSBOG00000032780	-	95	33.862
ENSSBOG00000030005	APOBEC3H	96	35.000	ENSSBOG00000035758	AICDA	85	35.000
ENSSBOG00000030005	APOBEC3H	93	42.647	ENSSBOG00000018208	-	92	37.838
ENSSBOG00000030005	APOBEC3H	99	40.719	ENSSBOG00000021384	-	86	40.719
ENSSBOG00000030005	APOBEC3H	98	34.595	ENSSBOG00000025673	-	89	34.595
ENSSBOG00000030005	APOBEC3H	98	37.629	ENSSBOG00000029091	-	89	37.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030005	APOBEC3H	100	69.504	ENSG00000100298	APOBEC3H	99	70.492	Homo_sapiens
ENSSBOG00000030005	APOBEC3H	100	47.260	ENSAMEG00000010818	-	76	46.524	Ailuropoda_melanoleuca
ENSSBOG00000030005	APOBEC3H	100	86.486	ENSANAG00000025410	APOBEC3H	93	79.426	Aotus_nancymaae
ENSSBOG00000030005	APOBEC3H	99	52.174	ENSBTAG00000007755	APOBEC3H	94	51.648	Bos_taurus
ENSSBOG00000030005	APOBEC3H	100	83.607	ENSCJAG00000012524	APOBEC3H	91	83.152	Callithrix_jacchus
ENSSBOG00000030005	APOBEC3H	99	52.747	ENSCAFG00000001361	APOBEC3Z3	92	52.747	Canis_familiaris
ENSSBOG00000030005	APOBEC3H	99	52.747	ENSCAFG00020002584	-	91	52.747	Canis_lupus_dingo
ENSSBOG00000030005	APOBEC3H	99	50.725	ENSCHIG00000026580	-	97	50.265	Capra_hircus
ENSSBOG00000030005	APOBEC3H	98	53.623	ENSTSYG00000032894	-	100	53.333	Carlito_syrichta
ENSSBOG00000030005	APOBEC3H	100	53.237	ENSCPOG00000009257	-	91	50.746	Cavia_porcellus
ENSSBOG00000030005	APOBEC3H	100	84.783	ENSCCAG00000008525	APOBEC3H	91	85.870	Cebus_capucinus
ENSSBOG00000030005	APOBEC3H	100	72.678	ENSCATG00000030302	APOBEC3H	100	72.678	Cercocebus_atys
ENSSBOG00000030005	APOBEC3H	98	53.631	ENSCLAG00000016615	-	97	51.244	Chinchilla_lanigera
ENSSBOG00000030005	APOBEC3H	100	71.038	ENSCSAG00000006371	APOBEC3H	99	65.094	Chlorocebus_sabaeus
ENSSBOG00000030005	APOBEC3H	100	55.634	ENSCGRG00001022976	Apobec3	88	51.232	Cricetulus_griseus_chok1gshd
ENSSBOG00000030005	APOBEC3H	100	55.634	ENSCGRG00000005621	Apobec3	90	51.232	Cricetulus_griseus_crigri
ENSSBOG00000030005	APOBEC3H	99	55.944	ENSDORG00000027271	-	81	54.595	Dipodomys_ordii
ENSSBOG00000030005	APOBEC3H	97	55.474	ENSECAG00000007726	APOBEC3H	75	53.889	Equus_caballus
ENSSBOG00000030005	APOBEC3H	100	51.064	ENSFCAG00000005251	APOBEC3Z3	91	51.099	Felis_catus
ENSSBOG00000030005	APOBEC3H	99	52.198	ENSSTOG00000007125	-	90	50.777	Ictidomys_tridecemlineatus
ENSSBOG00000030005	APOBEC3H	97	50.000	ENSJJAG00000016840	-	74	50.000	Jaculus_jaculus
ENSSBOG00000030005	APOBEC3H	99	48.905	ENSLAFG00000027404	-	95	48.619	Loxodonta_africana
ENSSBOG00000030005	APOBEC3H	100	73.770	ENSMFAG00000031827	APOBEC3H	99	67.299	Macaca_fascicularis
ENSSBOG00000030005	APOBEC3H	100	73.770	ENSMMUG00000001016	APOBEC3H	99	67.299	Macaca_mulatta
ENSSBOG00000030005	APOBEC3H	100	73.770	ENSMNEG00000039259	APOBEC3H	99	67.299	Macaca_nemestrina
ENSSBOG00000030005	APOBEC3H	100	73.224	ENSMLEG00000033417	APOBEC3H	98	67.308	Mandrillus_leucophaeus
ENSSBOG00000030005	APOBEC3H	100	54.545	ENSMAUG00000011683	Apobec3	86	53.514	Mesocricetus_auratus
ENSSBOG00000030005	APOBEC3H	99	53.571	ENSMOCG00000021576	Apobec3	78	54.645	Microtus_ochrogaster
ENSSBOG00000030005	APOBEC3H	100	50.704	MGP_CAROLIEiJ_G0020029	Apobec3	88	49.738	Mus_caroli
ENSSBOG00000030005	APOBEC3H	100	51.049	ENSMUSG00000009585	Apobec3	99	49.505	Mus_musculus
ENSSBOG00000030005	APOBEC3H	100	52.083	MGP_PahariEiJ_G0020031	-	86	51.075	Mus_pahari
ENSSBOG00000030005	APOBEC3H	100	51.049	MGP_SPRETEiJ_G0020927	Apobec3	98	39.286	Mus_spretus
ENSSBOG00000030005	APOBEC3H	99	50.549	ENSMPUG00000013239	-	80	50.549	Mustela_putorius_furo
ENSSBOG00000030005	APOBEC3H	99	53.285	ENSNGAG00000018998	Apobec3	87	52.222	Nannospalax_galili
ENSSBOG00000030005	APOBEC3H	99	72.857	ENSNLEG00000015218	-	95	66.010	Nomascus_leucogenys
ENSSBOG00000030005	APOBEC3H	99	43.646	ENSOCUG00000023913	-	78	43.646	Oryctolagus_cuniculus
ENSSBOG00000030005	APOBEC3H	99	50.000	ENSOARG00000016290	APOBEC3F	96	50.000	Ovis_aries
ENSSBOG00000030005	APOBEC3H	100	70.922	ENSPPAG00000036522	APOBEC3H	99	71.038	Pan_paniscus
ENSSBOG00000030005	APOBEC3H	100	52.482	ENSPPRG00000003941	-	91	52.198	Panthera_pardus
ENSSBOG00000030005	APOBEC3H	99	35.172	ENSPPRG00000003675	-	82	36.646	Panthera_pardus
ENSSBOG00000030005	APOBEC3H	100	52.482	ENSPTIG00000010283	-	91	52.198	Panthera_tigris_altaica
ENSSBOG00000030005	APOBEC3H	100	70.922	ENSPTRG00000014390	APOBEC3H	99	71.038	Pan_troglodytes
ENSSBOG00000030005	APOBEC3H	100	73.770	ENSPANG00000010774	APOBEC3H	99	67.773	Papio_anubis
ENSSBOG00000030005	APOBEC3H	100	51.408	ENSPEMG00000000456	Apobec3	78	50.543	Peromyscus_maniculatus_bairdii
ENSSBOG00000030005	APOBEC3H	99	73.381	ENSPPYG00000011834	-	98	65.385	Pongo_abelii
ENSSBOG00000030005	APOBEC3H	99	40.884	ENSPCAG00000015655	-	98	40.884	Procavia_capensis
ENSSBOG00000030005	APOBEC3H	60	37.647	ENSPVAG00000024267	-	77	40.196	Pteropus_vampyrus
ENSSBOG00000030005	APOBEC3H	99	52.143	ENSPVAG00000009462	-	99	51.934	Pteropus_vampyrus
ENSSBOG00000030005	APOBEC3H	69	34.646	ENSPVAG00000024161	-	93	34.646	Pteropus_vampyrus
ENSSBOG00000030005	APOBEC3H	100	52.448	ENSRNOG00000016852	Apobec3	86	51.351	Rattus_norvegicus
ENSSBOG00000030005	APOBEC3H	100	71.585	ENSRBIG00000029088	APOBEC3H	98	65.865	Rhinopithecus_bieti
ENSSBOG00000030005	APOBEC3H	100	72.131	ENSRROG00000024699	APOBEC3H	99	66.355	Rhinopithecus_roxellana
ENSSBOG00000030005	APOBEC3H	100	49.645	ENSSSCG00000000091	APOBEC3B	80	50.273	Sus_scrofa
ENSSBOG00000030005	APOBEC3H	94	53.030	ENSTBEG00000001532	-	98	51.149	Tupaia_belangeri
ENSSBOG00000030005	APOBEC3H	99	50.549	ENSTTRG00000001266	-	99	50.549	Tursiops_truncatus
ENSSBOG00000030005	APOBEC3H	100	47.973	ENSUAMG00000004427	-	84	47.396	Ursus_americanus
ENSSBOG00000030005	APOBEC3H	100	51.064	ENSUMAG00000014435	-	91	50.000	Ursus_maritimus
ENSSBOG00000030005	APOBEC3H	71	54.962	ENSVPAG00000011108	-	98	54.962	Vicugna_pacos