EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030146 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 4364 bases
Position: chrJH378173.1:5654727-5659090
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000027458	RNA_pol_L_2	PF13656.6	2.2e-24	1	1
ENSSBOP00000027458	RNA_pol_L	PF01193.24	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000044335	-	411	-	ENSSBOP00000027458	136 (aa)	-	A0A2K6U6D8

Gene Model

Click here to download ENSSBOG00000030146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030146	-	84	92.982	ENSSBOG00000028482	-	86	92.982
ENSSBOG00000030146	-	79	31.193	ENSSBOG00000025579	-	91	31.193
ENSSBOG00000030146	-	84	59.649	ENSSBOG00000022761	-	82	59.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030146	-	84	92.105	ENSG00000186184	POLR1D	86	92.105	Homo_sapiens
ENSSBOG00000030146	-	80	62.385	ENSAPOG00000021882	polr1d	98	62.385	Acanthochromis_polyacanthus
ENSSBOG00000030146	-	78	93.396	ENSAMEG00000019095	POLR1D	85	93.396	Ailuropoda_melanoleuca
ENSSBOG00000030146	-	72	70.408	ENSACIG00000013328	polr1d	85	70.408	Amphilophus_citrinellus
ENSSBOG00000030146	-	74	68.317	ENSAOCG00000018500	polr1d	89	68.317	Amphiprion_ocellaris
ENSSBOG00000030146	-	74	68.317	ENSAPEG00000009489	polr1d	89	68.317	Amphiprion_percula
ENSSBOG00000030146	-	73	67.677	ENSATEG00000019322	polr1d	88	68.367	Anabas_testudineus
ENSSBOG00000030146	-	70	64.211	ENSACAG00000015753	POLR1D	82	64.211	Anolis_carolinensis
ENSSBOG00000030146	-	84	92.982	ENSANAG00000024486	POLR1D	86	92.982	Aotus_nancymaae
ENSSBOG00000030146	-	73	70.707	ENSACLG00000023805	polr1d	88	70.707	Astatotilapia_calliptera
ENSSBOG00000030146	-	81	60.177	ENSAMXG00000036118	polr1d	83	66.316	Astyanax_mexicanus
ENSSBOG00000030146	-	84	89.474	ENSBTAG00000033252	-	86	89.474	Bos_taurus
ENSSBOG00000030146	-	84	89.474	ENSBTAG00000008642	POLR1D	86	89.474	Bos_taurus
ENSSBOG00000030146	-	84	92.982	ENSCJAG00000044669	POLR1D	86	92.982	Callithrix_jacchus
ENSSBOG00000030146	-	84	92.982	ENSCAFG00000006755	POLR1D	86	92.982	Canis_familiaris
ENSSBOG00000030146	-	84	90.351	ENSCHIG00000021910	POLR1D	86	90.351	Capra_hircus
ENSSBOG00000030146	-	77	89.524	ENSTSYG00000026817	-	79	89.524	Carlito_syrichta
ENSSBOG00000030146	-	80	77.477	ENSTSYG00000034852	-	83	78.000	Carlito_syrichta
ENSSBOG00000030146	-	85	53.846	ENSCAPG00000006058	-	87	53.846	Cavia_aperea
ENSSBOG00000030146	-	85	53.846	ENSCPOG00000030450	-	87	53.846	Cavia_porcellus
ENSSBOG00000030146	-	84	75.439	ENSCCAG00000020191	-	84	75.439	Cebus_capucinus
ENSSBOG00000030146	-	84	92.105	ENSCCAG00000021349	-	86	92.105	Cebus_capucinus
ENSSBOG00000030146	-	84	91.228	ENSCATG00000030710	-	86	91.228	Cercocebus_atys
ENSSBOG00000030146	-	84	83.333	ENSCATG00000022900	-	85	83.333	Cercocebus_atys
ENSSBOG00000030146	-	77	92.381	ENSCLAG00000017623	POLR1D	85	92.381	Chinchilla_lanigera
ENSSBOG00000030146	-	72	72.449	ENSCPBG00000004719	POLR1D	97	72.449	Chrysemys_picta_bellii
ENSSBOG00000030146	-	84	90.351	ENSCANG00000028632	-	86	90.351	Colobus_angolensis_palliatus
ENSSBOG00000030146	-	84	87.719	ENSCANG00000037694	-	86	87.719	Colobus_angolensis_palliatus
ENSSBOG00000030146	-	84	89.474	ENSCGRG00001021251	Polr1d	86	89.474	Cricetulus_griseus_chok1gshd
ENSSBOG00000030146	-	84	89.474	ENSCGRG00000011639	Polr1d	86	89.474	Cricetulus_griseus_crigri
ENSSBOG00000030146	-	73	68.687	ENSCSEG00000018268	polr1d	85	68.687	Cynoglossus_semilaevis
ENSSBOG00000030146	-	73	67.677	ENSCVAG00000018527	polr1d	87	67.677	Cyprinodon_variegatus
ENSSBOG00000030146	-	79	60.909	ENSDARG00000037570	polr1d	98	60.909	Danio_rerio
ENSSBOG00000030146	-	84	88.696	ENSDNOG00000046247	-	86	88.696	Dasypus_novemcinctus
ENSSBOG00000030146	-	84	89.474	ENSDNOG00000043676	-	86	89.474	Dasypus_novemcinctus
ENSSBOG00000030146	-	84	90.351	ENSDORG00000029155	Polr1d	86	90.351	Dipodomys_ordii
ENSSBOG00000030146	-	65	39.773	FBgn0086447	l(2)37Cg	79	39.773	Drosophila_melanogaster
ENSSBOG00000030146	-	77	86.667	ENSETEG00000012797	POLR1D	85	86.667	Echinops_telfairi
ENSSBOG00000030146	-	60	67.073	ENSEBUG00000011748	polr1d	57	67.073	Eptatretus_burgeri
ENSSBOG00000030146	-	84	92.105	ENSEASG00005022487	POLR1D	88	92.105	Equus_asinus_asinus
ENSSBOG00000030146	-	77	93.333	ENSEEUG00000013144	POLR1D	85	93.333	Erinaceus_europaeus
ENSSBOG00000030146	-	70	70.526	ENSELUG00000005105	rpac2	83	70.526	Esox_lucius
ENSSBOG00000030146	-	84	92.105	ENSFCAG00000030162	POLR1D	86	92.105	Felis_catus
ENSSBOG00000030146	-	68	68.000	ENSFALG00000011463	POLR1D	99	68.000	Ficedula_albicollis
ENSSBOG00000030146	-	84	90.351	ENSFDAG00000004463	POLR1D	86	90.351	Fukomys_damarensis
ENSSBOG00000030146	-	74	71.569	ENSFHEG00000015410	polr1d	89	71.569	Fundulus_heteroclitus
ENSSBOG00000030146	-	82	63.063	ENSGAFG00000001693	polr1d	87	69.697	Gambusia_affinis
ENSSBOG00000030146	-	74	68.627	ENSGACG00000018585	polr1d	86	68.627	Gasterosteus_aculeatus
ENSSBOG00000030146	-	76	67.273	ENSGAGG00000008503	POLR1D	96	67.273	Gopherus_agassizii
ENSSBOG00000030146	-	84	92.105	ENSGGOG00000004235	POLR1D	86	92.105	Gorilla_gorilla
ENSSBOG00000030146	-	73	70.707	ENSHBUG00000002111	polr1d	87	70.707	Haplochromis_burtoni
ENSSBOG00000030146	-	84	91.228	ENSHGLG00000003202	POLR1D	86	91.228	Heterocephalus_glaber_female
ENSSBOG00000030146	-	84	91.228	ENSHGLG00100009393	POLR1D	86	91.228	Heterocephalus_glaber_male
ENSSBOG00000030146	-	71	69.792	ENSHCOG00000003258	polr1d	84	69.792	Hippocampus_comes
ENSSBOG00000030146	-	66	73.333	ENSIPUG00000014810	polr1d	78	73.333	Ictalurus_punctatus
ENSSBOG00000030146	-	84	92.982	ENSSTOG00000013877	POLR1D	86	92.982	Ictidomys_tridecemlineatus
ENSSBOG00000030146	-	78	70.755	ENSJJAG00000021667	-	62	70.755	Jaculus_jaculus
ENSSBOG00000030146	-	77	89.524	ENSJJAG00000022671	-	84	89.109	Jaculus_jaculus
ENSSBOG00000030146	-	72	67.347	ENSKMAG00000015256	polr1d	86	67.347	Kryptolebias_marmoratus
ENSSBOG00000030146	-	73	69.697	ENSLBEG00000015919	polr1d	87	69.697	Labrus_bergylta
ENSSBOG00000030146	-	77	60.952	ENSLACG00000006810	POLR1D	87	60.952	Latimeria_chalumnae
ENSSBOG00000030146	-	53	71.622	ENSLOCG00000014976	polr1d	100	71.622	Lepisosteus_oculatus
ENSSBOG00000030146	-	84	85.965	ENSLAFG00000032290	POLR1D	86	85.965	Loxodonta_africana
ENSSBOG00000030146	-	80	88.991	ENSMFAG00000045264	POLR1D	84	88.991	Macaca_fascicularis
ENSSBOG00000030146	-	71	90.722	ENSMMUG00000020386	POLR1D	84	90.722	Macaca_mulatta
ENSSBOG00000030146	-	84	71.053	ENSMMUG00000041570	-	83	71.053	Macaca_mulatta
ENSSBOG00000030146	-	84	91.228	ENSMNEG00000008630	-	86	91.228	Macaca_nemestrina
ENSSBOG00000030146	-	84	75.439	ENSMNEG00000038120	-	84	75.439	Macaca_nemestrina
ENSSBOG00000030146	-	84	80.702	ENSMLEG00000032251	-	85	80.702	Mandrillus_leucophaeus
ENSSBOG00000030146	-	84	91.228	ENSMLEG00000041048	-	86	91.228	Mandrillus_leucophaeus
ENSSBOG00000030146	-	74	67.327	ENSMAMG00000014834	polr1d	94	67.327	Mastacembelus_armatus
ENSSBOG00000030146	-	73	70.707	ENSMZEG00005006638	polr1d	88	70.707	Maylandia_zebra
ENSSBOG00000030146	-	67	72.527	ENSMGAG00000005322	POLR1D	83	72.527	Meleagris_gallopavo
ENSSBOG00000030146	-	84	89.474	ENSMAUG00000001946	Polr1d	86	89.474	Mesocricetus_auratus
ENSSBOG00000030146	-	84	92.105	ENSMICG00000016883	-	86	92.105	Microcebus_murinus
ENSSBOG00000030146	-	83	76.106	ENSMICG00000007349	-	85	76.106	Microcebus_murinus
ENSSBOG00000030146	-	84	89.474	ENSMOCG00000021288	Polr1d	86	89.474	Microtus_ochrogaster
ENSSBOG00000030146	-	73	66.667	ENSMMOG00000009605	polr1d	87	66.667	Mola_mola
ENSSBOG00000030146	-	70	78.947	ENSMODG00000023881	POLR1D	83	78.947	Monodelphis_domestica
ENSSBOG00000030146	-	73	66.667	ENSMALG00000010652	polr1d	87	66.667	Monopterus_albus
ENSSBOG00000030146	-	84	86.842	MGP_CAROLIEiJ_G0028034	Polr1d	86	86.842	Mus_caroli
ENSSBOG00000030146	-	84	86.842	ENSMUSG00000029642	Polr1d	86	86.842	Mus_musculus
ENSSBOG00000030146	-	84	86.842	MGP_PahariEiJ_G0024600	Polr1d	86	86.842	Mus_pahari
ENSSBOG00000030146	-	84	87.719	MGP_SPRETEiJ_G0029032	Polr1d	86	87.719	Mus_spretus
ENSSBOG00000030146	-	83	80.531	ENSMLUG00000004118	-	85	80.531	Myotis_lucifugus
ENSSBOG00000030146	-	84	92.105	ENSMLUG00000027169	-	86	92.105	Myotis_lucifugus
ENSSBOG00000030146	-	71	91.753	ENSNGAG00000006014	Polr1d	84	91.753	Nannospalax_galili
ENSSBOG00000030146	-	73	70.707	ENSNBRG00000020327	polr1d	87	70.707	Neolamprologus_brichardi
ENSSBOG00000030146	-	84	92.105	ENSNLEG00000000358	POLR1D	86	92.105	Nomascus_leucogenys
ENSSBOG00000030146	-	84	91.228	ENSODEG00000005294	-	86	91.228	Octodon_degus
ENSSBOG00000030146	-	88	76.471	ENSODEG00000014801	-	88	76.471	Octodon_degus
ENSSBOG00000030146	-	70	77.895	ENSOANG00000008708	-	88	77.895	Ornithorhynchus_anatinus
ENSSBOG00000030146	-	84	91.228	ENSOCUG00000015706	POLR1D	70	91.228	Oryctolagus_cuniculus
ENSSBOG00000030146	-	79	62.617	ENSORLG00000010257	polr1d	87	66.667	Oryzias_latipes
ENSSBOG00000030146	-	76	64.423	ENSORLG00020000533	polr1d	70	64.423	Oryzias_latipes_hni
ENSSBOG00000030146	-	78	65.094	ENSORLG00015013267	polr1d	70	65.094	Oryzias_latipes_hsok
ENSSBOG00000030146	-	79	65.741	ENSOMEG00000014912	polr1d	72	65.741	Oryzias_melastigma
ENSSBOG00000030146	-	84	92.982	ENSOGAG00000014601	POLR1D	86	92.982	Otolemur_garnettii
ENSSBOG00000030146	-	78	90.566	ENSOARG00000017005	POLR1D	82	90.566	Ovis_aries
ENSSBOG00000030146	-	84	92.105	ENSPPAG00000028138	POLR1D	86	92.105	Pan_paniscus
ENSSBOG00000030146	-	84	92.105	ENSPPRG00000003381	POLR1D	86	92.105	Panthera_pardus
ENSSBOG00000030146	-	77	92.381	ENSPTIG00000018137	POLR1D	79	92.381	Panthera_tigris_altaica
ENSSBOG00000030146	-	84	92.105	ENSPTRG00000005734	POLR1D	86	92.105	Pan_troglodytes
ENSSBOG00000030146	-	84	91.228	ENSPANG00000020259	-	86	91.228	Papio_anubis
ENSSBOG00000030146	-	85	80.000	ENSPANG00000035051	-	86	80.000	Papio_anubis
ENSSBOG00000030146	-	85	53.333	ENSPKIG00000021891	polr1d	94	46.218	Paramormyrops_kingsleyae
ENSSBOG00000030146	-	79	65.517	ENSPSIG00000011822	POLR1D	90	65.517	Pelodiscus_sinensis
ENSSBOG00000030146	-	73	65.657	ENSPMGG00000010359	polr1d	86	65.657	Periophthalmus_magnuspinnatus
ENSSBOG00000030146	-	82	54.464	ENSPMGG00000012998	POLR1D	82	54.464	Periophthalmus_magnuspinnatus
ENSSBOG00000030146	-	84	86.842	ENSPEMG00000006336	-	85	86.842	Peromyscus_maniculatus_bairdii
ENSSBOG00000030146	-	65	60.674	ENSPMAG00000004228	polr1d	75	60.674	Petromyzon_marinus
ENSSBOG00000030146	-	76	71.818	ENSPCIG00000001673	POLR1D	96	71.818	Phascolarctos_cinereus
ENSSBOG00000030146	-	73	69.697	ENSPFOG00000023343	polr1d	85	72.973	Poecilia_formosa
ENSSBOG00000030146	-	73	69.697	ENSPLAG00000009675	polr1d	87	69.697	Poecilia_latipinna
ENSSBOG00000030146	-	73	69.697	ENSPMEG00000004628	polr1d	87	69.697	Poecilia_mexicana
ENSSBOG00000030146	-	73	69.697	ENSPREG00000022032	polr1d	87	69.697	Poecilia_reticulata
ENSSBOG00000030146	-	84	90.351	ENSPCOG00000028175	POLR1D	86	90.351	Propithecus_coquereli
ENSSBOG00000030146	-	73	70.707	ENSPNYG00000000107	polr1d	87	70.707	Pundamilia_nyererei
ENSSBOG00000030146	-	76	59.633	ENSPNAG00000001512	polr1d	94	58.929	Pygocentrus_nattereri
ENSSBOG00000030146	-	84	91.228	ENSRBIG00000036378	-	86	91.228	Rhinopithecus_bieti
ENSSBOG00000030146	-	84	87.719	ENSRBIG00000000336	-	86	87.719	Rhinopithecus_bieti
ENSSBOG00000030146	-	84	91.228	ENSRROG00000042232	-	86	91.228	Rhinopithecus_roxellana
ENSSBOG00000030146	-	84	87.719	ENSRROG00000026751	-	86	87.719	Rhinopithecus_roxellana
ENSSBOG00000030146	-	86	42.735	YNL113W	RPC19	82	42.735	Saccharomyces_cerevisiae
ENSSBOG00000030146	-	70	76.842	ENSSHAG00000001190	POLR1D	74	76.842	Sarcophilus_harrisii
ENSSBOG00000030146	-	74	70.588	ENSSFOG00015011375	polr1d	89	70.588	Scleropages_formosus
ENSSBOG00000030146	-	73	67.677	ENSSMAG00000011861	polr1d	87	67.677	Scophthalmus_maximus
ENSSBOG00000030146	-	73	66.667	ENSSDUG00000011930	polr1d	87	66.667	Seriola_dumerili
ENSSBOG00000030146	-	80	63.303	ENSSLDG00000023871	polr1d	92	63.303	Seriola_lalandi_dorsalis
ENSSBOG00000030146	-	84	92.105	ENSSARG00000007840	POLR1D	86	92.105	Sorex_araneus
ENSSBOG00000030146	-	65	76.136	ENSSPUG00000005786	POLR1D	81	71.579	Sphenodon_punctatus
ENSSBOG00000030146	-	73	71.717	ENSSPAG00000011764	polr1d	87	71.717	Stegastes_partitus
ENSSBOG00000030146	-	88	87.500	ENSSSCG00000009310	POLR1D	90	87.500	Sus_scrofa
ENSSBOG00000030146	-	63	75.294	ENSTGUG00000005450	POLR1D	89	75.294	Taeniopygia_guttata
ENSSBOG00000030146	-	72	64.286	ENSTRUG00000019741	polr1d	86	64.286	Takifugu_rubripes
ENSSBOG00000030146	-	81	90.000	ENSTBEG00000007006	POLR1D	89	90.000	Tupaia_belangeri
ENSSBOG00000030146	-	84	92.982	ENSUAMG00000011413	POLR1D	86	92.982	Ursus_americanus
ENSSBOG00000030146	-	77	93.333	ENSUMAG00000016968	POLR1D	82	93.333	Ursus_maritimus
ENSSBOG00000030146	-	84	92.982	ENSVVUG00000009216	POLR1D	86	92.982	Vulpes_vulpes
ENSSBOG00000030146	-	75	68.627	ENSXCOG00000011731	polr1d	78	68.627	Xiphophorus_couchianus
ENSSBOG00000030146	-	75	68.627	ENSXMAG00000017538	polr1d	78	68.627	Xiphophorus_maculatus