EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000030159 (Gene tree)
Gene ID: 101036339
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 42927 bases
Position: chrJH378166.1:1380845-1423771
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000028015	RRM_5	PF13893.6	8.4e-07	1	2
ENSSBOP00000028015	RRM_5	PF13893.6	8.4e-07	2	2
ENSSBOP00000028104	RRM_5	PF13893.6	8.7e-07	1	2
ENSSBOP00000028104	RRM_5	PF13893.6	8.7e-07	2	2
ENSSBOP00000028087	RRM_5	PF13893.6	2.1e-06	1	1
ENSSBOP00000028011	RRM_5	PF13893.6	2.5e-06	1	1
ENSSBOP00000028097	RRM_5	PF13893.6	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000044889	-	4117	XM_003933923	ENSSBOP00000028011	847 (aa)	XP_003933972	A0A2K6U7Y0
ENSSBOT00000044983	-	1695	-	ENSSBOP00000028104	564 (aa)	-	A0A2K6U879
ENSSBOT00000044966	-	2385	-	ENSSBOP00000028087	794 (aa)	-	A0A2K6U843
ENSSBOT00000044893	-	3029	XM_003933927	ENSSBOP00000028015	559 (aa)	XP_003933976	A0A2K6U822
ENSSBOT00000044975	-	2703	-	ENSSBOP00000028097	900 (aa)	-	A0A2K6U853
ENSSBOT00000044938	-	852	-	ENSSBOP00000028059	283 (aa)	-	A0A2K6U837

Gene Model

Click here to download ENSSBOG00000030159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030159	-	100	99.055	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSSBOG00000030159	-	98	96.836	ENSAMEG00000011347	-	99	96.836	Ailuropoda_melanoleuca
ENSSBOG00000030159	-	98	81.105	ENSAPLG00000008118	-	99	80.509	Anas_platyrhynchos
ENSSBOG00000030159	-	99	72.216	ENSACAG00000016233	-	99	71.364	Anolis_carolinensis
ENSSBOG00000030159	-	89	72.826	ENSANAG00000024654	-	99	72.826	Aotus_nancymaae
ENSSBOG00000030159	-	100	99.528	ENSANAG00000022951	-	100	99.528	Aotus_nancymaae
ENSSBOG00000030159	-	95	32.731	ENSAMXG00000010681	matr3l1.1	89	46.835	Astyanax_mexicanus
ENSSBOG00000030159	-	81	38.583	ENSAMXG00000010685	matr3l1.1	84	39.552	Astyanax_mexicanus
ENSSBOG00000030159	-	100	92.773	ENSBTAG00000006756	MATR3	99	96.675	Bos_taurus
ENSSBOG00000030159	-	100	99.463	ENSCJAG00000006888	-	100	99.463	Callithrix_jacchus
ENSSBOG00000030159	-	100	98.115	ENSCAFG00000001345	MATR3	100	98.115	Canis_familiaris
ENSSBOG00000030159	-	99	96.244	ENSCAFG00020010504	-	98	98.331	Canis_lupus_dingo
ENSSBOG00000030159	-	100	98.351	ENSCHIG00000025746	-	100	98.351	Capra_hircus
ENSSBOG00000030159	-	100	98.701	ENSTSYG00000011028	-	100	98.701	Carlito_syrichta
ENSSBOG00000030159	-	99	98.345	ENSCPOG00000014076	-	99	98.345	Cavia_porcellus
ENSSBOG00000030159	-	55	47.692	ENSCCAG00000028170	ZNF638	67	31.928	Cebus_capucinus
ENSSBOG00000030159	-	100	99.882	ENSCCAG00000025074	-	100	99.882	Cebus_capucinus
ENSSBOG00000030159	-	52	56.000	ENSCATG00000032207	ZNF638	67	31.515	Cercocebus_atys
ENSSBOG00000030159	-	100	98.748	ENSCATG00000041304	-	100	98.748	Cercocebus_atys
ENSSBOG00000030159	-	99	98.463	ENSCLAG00000015998	-	99	98.463	Chinchilla_lanigera
ENSSBOG00000030159	-	100	99.292	ENSCSAG00000013075	-	100	99.292	Chlorocebus_sabaeus
ENSSBOG00000030159	-	98	79.689	ENSCPBG00000006303	-	99	80.355	Chrysemys_picta_bellii
ENSSBOG00000030159	-	100	97.875	ENSCANG00000028224	-	100	97.875	Colobus_angolensis_palliatus
ENSSBOG00000030159	-	100	98.347	ENSCGRG00001020227	Matr3	100	98.347	Cricetulus_griseus_chok1gshd
ENSSBOG00000030159	-	100	98.229	ENSCGRG00000011298	Matr3	100	98.229	Cricetulus_griseus_crigri
ENSSBOG00000030159	-	97	32.143	ENSCSEG00000012682	matr3l1.1	88	47.826	Cynoglossus_semilaevis
ENSSBOG00000030159	-	83	36.842	ENSCVAG00000005337	matr3l1.1	94	34.940	Cyprinodon_variegatus
ENSSBOG00000030159	-	98	96.727	ENSDNOG00000037723	-	99	96.727	Dasypus_novemcinctus
ENSSBOG00000030159	-	100	98.587	ENSEASG00005020857	-	100	98.587	Equus_asinus_asinus
ENSSBOG00000030159	-	100	98.469	ENSECAG00000012882	MATR3	100	98.469	Equus_caballus
ENSSBOG00000030159	-	81	44.118	ENSELUG00000021651	si:ch211-271b14.1	95	44.118	Esox_lucius
ENSSBOG00000030159	-	86	36.471	ENSELUG00000021848	matr3l1.1	75	51.515	Esox_lucius
ENSSBOG00000030159	-	100	98.492	ENSFCAG00000021911	-	100	98.492	Felis_catus
ENSSBOG00000030159	-	98	79.291	ENSFALG00000003071	-	99	79.291	Ficedula_albicollis
ENSSBOG00000030159	-	100	97.521	ENSFDAG00000017675	-	100	97.521	Fukomys_damarensis
ENSSBOG00000030159	-	98	80.577	ENSGALG00000002478	MATR3	99	80.022	Gallus_gallus
ENSSBOG00000030159	-	98	79.513	ENSGAGG00000011386	-	99	80.177	Gopherus_agassizii
ENSSBOG00000030159	-	100	99.174	ENSGGOG00000007308	-	100	99.174	Gorilla_gorilla
ENSSBOG00000030159	-	100	98.701	ENSHGLG00000004673	MATR3	100	98.701	Heterocephalus_glaber_female
ENSSBOG00000030159	-	91	98.035	ENSHGLG00100006442	-	100	98.035	Heterocephalus_glaber_male
ENSSBOG00000030159	-	57	47.059	ENSHCOG00000013223	matr3l1.1	80	48.077	Hippocampus_comes
ENSSBOG00000030159	-	100	98.704	ENSSTOG00000014746	-	100	98.704	Ictidomys_tridecemlineatus
ENSSBOG00000030159	-	91	70.254	ENSJJAG00000011022	-	95	78.142	Jaculus_jaculus
ENSSBOG00000030159	-	100	97.285	ENSJJAG00000021710	-	100	97.285	Jaculus_jaculus
ENSSBOG00000030159	-	63	43.210	ENSLBEG00000018267	matr3l1.1	86	35.897	Labrus_bergylta
ENSSBOG00000030159	-	99	56.135	ENSLACG00000006743	-	99	58.397	Latimeria_chalumnae
ENSSBOG00000030159	-	100	98.927	ENSMFAG00000000634	-	100	98.927	Macaca_fascicularis
ENSSBOG00000030159	-	63	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSSBOG00000030159	-	100	99.370	ENSMMUG00000016741	MATR3	100	99.370	Macaca_mulatta
ENSSBOG00000030159	-	100	99.410	ENSMNEG00000042856	-	100	99.410	Macaca_nemestrina
ENSSBOG00000030159	-	100	99.410	ENSMLEG00000041178	-	100	99.410	Mandrillus_leucophaeus
ENSSBOG00000030159	-	74	48.235	ENSMAMG00000013840	matr3l1.1	75	41.880	Mastacembelus_armatus
ENSSBOG00000030159	-	98	80.466	ENSMGAG00000001331	-	99	79.911	Meleagris_gallopavo
ENSSBOG00000030159	-	100	97.993	ENSMAUG00000011647	Matr3	100	97.993	Mesocricetus_auratus
ENSSBOG00000030159	-	95	97.561	ENSMICG00000012438	-	100	97.239	Microcebus_murinus
ENSSBOG00000030159	-	100	97.993	ENSMOCG00000015711	Matr3	100	97.993	Microtus_ochrogaster
ENSSBOG00000030159	-	100	90.984	ENSMODG00000011925	-	99	89.227	Monodelphis_domestica
ENSSBOG00000030159	-	100	98.111	MGP_CAROLIEiJ_G0022108	Matr3	100	98.111	Mus_caroli
ENSSBOG00000030159	-	100	98.111	ENSMUSG00000037236	Matr3	100	98.111	Mus_musculus
ENSSBOG00000030159	-	100	98.111	MGP_PahariEiJ_G0018842	Matr3	100	98.111	Mus_pahari
ENSSBOG00000030159	-	100	97.757	MGP_SPRETEiJ_G0023020	Matr3	100	97.757	Mus_spretus
ENSSBOG00000030159	-	100	96.875	ENSMPUG00000009297	-	100	96.875	Mustela_putorius_furo
ENSSBOG00000030159	-	100	97.412	ENSMLUG00000005798	-	99	97.412	Myotis_lucifugus
ENSSBOG00000030159	-	100	98.229	ENSNGAG00000017452	Matr3	100	98.229	Nannospalax_galili
ENSSBOG00000030159	-	100	99.410	ENSNLEG00000009093	-	100	99.410	Nomascus_leucogenys
ENSSBOG00000030159	-	98	92.299	ENSOPRG00000016511	-	99	92.299	Ochotona_princeps
ENSSBOG00000030159	-	99	98.345	ENSODEG00000003015	-	99	98.345	Octodon_degus
ENSSBOG00000030159	-	100	98.583	ENSOCUG00000026311	MATR3	100	98.583	Oryctolagus_cuniculus
ENSSBOG00000030159	-	94	33.333	ENSORLG00020009362	matr3l1.1	78	37.778	Oryzias_latipes_hni
ENSSBOG00000030159	-	63	48.148	ENSORLG00015018551	matr3l1.1	79	37.956	Oryzias_latipes_hsok
ENSSBOG00000030159	-	70	32.812	ENSOMEG00000022287	matr3l1.1	80	34.731	Oryzias_melastigma
ENSSBOG00000030159	-	100	99.174	ENSOGAG00000010607	-	100	99.174	Otolemur_garnettii
ENSSBOG00000030159	-	100	98.351	ENSOARG00000016931	-	99	98.351	Ovis_aries
ENSSBOG00000030159	-	100	91.055	ENSPPAG00000026720	-	99	93.066	Pan_paniscus
ENSSBOG00000030159	-	100	98.748	ENSPPAG00000001418	-	100	98.748	Pan_paniscus
ENSSBOG00000030159	-	100	98.618	ENSPPRG00000008004	-	100	98.618	Panthera_pardus
ENSSBOG00000030159	-	98	97.096	ENSPTIG00000010711	-	100	98.645	Panthera_tigris_altaica
ENSSBOG00000030159	-	100	98.748	ENSPTRG00000017294	MATR3	100	98.748	Pan_troglodytes
ENSSBOG00000030159	-	99	97.302	ENSPANG00000032489	-	99	98.723	Papio_anubis
ENSSBOG00000030159	-	100	98.927	ENSPANG00000012018	-	100	98.927	Papio_anubis
ENSSBOG00000030159	-	96	32.743	ENSPKIG00000000333	matr3l1.1	89	42.609	Paramormyrops_kingsleyae
ENSSBOG00000030159	-	98	80.155	ENSPSIG00000014598	-	99	80.820	Pelodiscus_sinensis
ENSSBOG00000030159	-	100	97.875	ENSPEMG00000020679	Matr3	100	97.875	Peromyscus_maniculatus_bairdii
ENSSBOG00000030159	-	98	97.622	ENSPPYG00000015835	-	99	97.622	Pongo_abelii
ENSSBOG00000030159	-	100	98.819	ENSPCOG00000025718	-	100	98.819	Propithecus_coquereli
ENSSBOG00000030159	-	98	97.383	ENSPVAG00000015431	-	100	97.383	Pteropus_vampyrus
ENSSBOG00000030159	-	54	45.455	ENSPNYG00000015855	-	99	37.647	Pundamilia_nyererei
ENSSBOG00000030159	-	100	97.757	ENSRNOG00000019875	Matr3	100	97.757	Rattus_norvegicus
ENSSBOG00000030159	-	100	98.927	ENSRBIG00000034713	-	100	98.927	Rhinopithecus_bieti
ENSSBOG00000030159	-	100	98.927	ENSRROG00000039415	-	100	99.018	Rhinopithecus_roxellana
ENSSBOG00000030159	-	100	97.521	ENSRROG00000043949	-	100	97.521	Rhinopithecus_roxellana
ENSSBOG00000030159	-	100	91.101	ENSSHAG00000010331	-	99	89.344	Sarcophilus_harrisii
ENSSBOG00000030159	-	62	55.556	ENSSDUG00000015369	matr3l1.1	82	53.846	Seriola_dumerili
ENSSBOG00000030159	-	98	78.761	ENSSPUG00000019236	-	99	79.379	Sphenodon_punctatus
ENSSBOG00000030159	-	100	98.492	ENSSSCG00000014343	-	100	98.492	Sus_scrofa
ENSSBOG00000030159	-	98	79.646	ENSTGUG00000014568	MATR3	99	79.646	Taeniopygia_guttata
ENSSBOG00000030159	-	51	37.327	ENSTRUG00000001692	-	83	35.317	Takifugu_rubripes
ENSSBOG00000030159	-	61	57.143	ENSTNIG00000003166	matr3l1.1	72	56.863	Tetraodon_nigroviridis
ENSSBOG00000030159	-	90	98.470	ENSUAMG00000000097	-	97	98.470	Ursus_americanus
ENSSBOG00000030159	-	100	97.998	ENSUMAG00000015808	-	100	97.998	Ursus_maritimus
ENSSBOG00000030159	-	98	96.843	ENSVPAG00000006337	-	99	96.843	Vicugna_pacos
ENSSBOG00000030159	-	100	98.351	ENSVVUG00000020287	-	100	98.351	Vulpes_vulpes
ENSSBOG00000030159	-	98	55.863	ENSXETG00000003838	matr3	99	54.745	Xenopus_tropicalis
ENSSBOG00000030159	-	68	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus