EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSBOG00000030233 (Gene tree)
Gene ID
101044392
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Saimiri_boliviensis_boliviensis
Status
putative
Strand
Plus strand
Length
52120 bases
Position
chrJH378137.1:20935556-20987675
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSBOP00000027651tRNA_anti-codonPF01336.253.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSBOT00000044529RPA1-2011737XM_010340047ENSSBOP00000027651578 (aa)XP_010338349A0A2K6U6X3
Gene Model
Click here to download ENSSBOG00000030233's gene model file
Pathways
Pathway IDPathway NameSource
sbq03030DNA replicationKEGG
sbq03420Nucleotide excision repairKEGG
sbq03430Mismatch repairKEGG
sbq03440Homologous recombinationKEGG
sbq03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030233's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSBOG00000030233RPA19764.286ENSAPOG00000011658rpa19663.393Acanthochromis_polyacanthus
ENSSBOG00000030233RPA18663.616ENSAPOG00000019409RPA17263.616Acanthochromis_polyacanthus
ENSSBOG00000030233RPA19985.572ENSAMEG00000007706RPA19785.572Ailuropoda_melanoleuca
ENSSBOG00000030233RPA19757.500ENSACIG00000007277rpa19457.143Amphilophus_citrinellus
ENSSBOG00000030233RPA19758.897ENSACIG00000012881RPA19559.034Amphilophus_citrinellus
ENSSBOG00000030233RPA19754.742ENSAOCG00000009003RPA19255.184Amphiprion_ocellaris
ENSSBOG00000030233RPA19764.769ENSAOCG00000023376rpa19663.685Amphiprion_ocellaris
ENSSBOG00000030233RPA19754.412ENSAPEG00000019132RPA19252.472Amphiprion_percula
ENSSBOG00000030233RPA19764.769ENSAPEG00000008634rpa19663.685Amphiprion_percula
ENSSBOG00000030233RPA19756.427ENSATEG00000006443RPA19255.426Anabas_testudineus
ENSSBOG00000030233RPA19764.286ENSATEG00000022024rpa19663.929Anabas_testudineus
ENSSBOG00000030233RPA19962.094ENSAPLG00000012442RPA110061.947Anas_platyrhynchos
ENSSBOG00000030233RPA19762.326ENSACAG00000014490RPA19063.428Anolis_carolinensis
ENSSBOG00000030233RPA19992.869ENSANAG00000023456RPA110092.869Aotus_nancymaae
ENSSBOG00000030233RPA19759.215ENSACLG00000005223RPA19158.362Astatotilapia_calliptera
ENSSBOG00000030233RPA19763.750ENSACLG00000006640rpa19763.750Astatotilapia_calliptera
ENSSBOG00000030233RPA19762.679ENSAMXG00000008418rpa19460.357Astyanax_mexicanus
ENSSBOG00000030233RPA19985.927ENSBTAG00000009711RPA19885.927Bos_taurus
ENSSBOG00000030233RPA18430.675WBGene00017546rpa-17031.116Caenorhabditis_elegans
ENSSBOG00000030233RPA110093.058ENSCJAG00000001848RPA19893.058Callithrix_jacchus
ENSSBOG00000030233RPA19984.603ENSCAFG00000019249RPA19884.603Canis_familiaris
ENSSBOG00000030233RPA19984.603ENSCAFG00020009847RPA19884.603Canis_lupus_dingo
ENSSBOG00000030233RPA19986.258ENSCHIG00000026308RPA19886.258Capra_hircus
ENSSBOG00000030233RPA19986.777ENSTSYG00000003482-9886.612Carlito_syrichta
ENSSBOG00000030233RPA19984.768ENSCPOG00000000035RPA19884.768Cavia_porcellus
ENSSBOG00000030233RPA110082.178ENSCCAG00000010981RPA19882.178Cebus_capucinus
ENSSBOG00000030233RPA19985.548ENSCLAG00000005185-9885.548Chinchilla_lanigera
ENSSBOG00000030233RPA19980.298ENSCLAG00000015045-9880.298Chinchilla_lanigera
ENSSBOG00000030233RPA19977.686ENSCSAG00000013833RPA19877.686Chlorocebus_sabaeus
ENSSBOG00000030233RPA19786.096ENSCHOG00000013540-9586.096Choloepus_hoffmanni
ENSSBOG00000030233RPA17691.800ENSCHOG00000009454-10091.800Choloepus_hoffmanni
ENSSBOG00000030233RPA19777.818ENSCPBG00000020377RPA19877.102Chrysemys_picta_bellii
ENSSBOG00000030233RPA19644.326ENSCING00000023482-9044.365Ciona_intestinalis
ENSSBOG00000030233RPA19985.596ENSCANG00000030911RPA19985.596Colobus_angolensis_palliatus
ENSSBOG00000030233RPA19983.663ENSCGRG00001008197Rpa19882.673Cricetulus_griseus_chok1gshd
ENSSBOG00000030233RPA18786.982ENSCGRG00000000582Rpa19985.799Cricetulus_griseus_crigri
ENSSBOG00000030233RPA19761.497ENSCSEG00000013066rpa19161.497Cynoglossus_semilaevis
ENSSBOG00000030233RPA19753.899ENSCSEG00000012726RPA19751.979Cynoglossus_semilaevis
ENSSBOG00000030233RPA19354.530ENSCVAG00000013446-8854.209Cyprinodon_variegatus
ENSSBOG00000030233RPA19665.412ENSCVAG00000019431rpa19764.171Cyprinodon_variegatus
ENSSBOG00000030233RPA19764.464ENSDARG00000003938rpa19163.815Danio_rerio
ENSSBOG00000030233RPA19985.382ENSDNOG00000017218RPA19885.382Dasypus_novemcinctus
ENSSBOG00000030233RPA19789.204ENSDORG00000006199Rpa19886.093Dipodomys_ordii
ENSSBOG00000030233RPA19643.517FBgn0010173RpA-708943.162Drosophila_melanogaster
ENSSBOG00000030233RPA18183.333ENSETEG00000017608RPA18083.333Echinops_telfairi
ENSSBOG00000030233RPA19986.070ENSEASG00005009372RPA110084.330Equus_asinus_asinus
ENSSBOG00000030233RPA19986.589ENSECAG00000023886RPA19886.589Equus_caballus
ENSSBOG00000030233RPA17390.000ENSEEUG00000002186-6890.000Erinaceus_europaeus
ENSSBOG00000030233RPA19457.431ENSELUG00000006136RPA19956.881Esox_lucius
ENSSBOG00000030233RPA19762.032ENSELUG00000021071rpa19161.744Esox_lucius
ENSSBOG00000030233RPA19983.471ENSFCAG00000006306RPA19883.471Felis_catus
ENSSBOG00000030233RPA110071.053ENSFALG00000006575RPA19870.888Ficedula_albicollis
ENSSBOG00000030233RPA19985.714ENSFDAG00000007720RPA19885.572Fukomys_damarensis
ENSSBOG00000030233RPA19663.555ENSFHEG00000003580rpa19162.657Fundulus_heteroclitus
ENSSBOG00000030233RPA19760.465ENSGMOG00000010382rpa19160.465Gadus_morhua
ENSSBOG00000030233RPA19774.733ENSGALG00000003072RPA19174.733Gallus_gallus
ENSSBOG00000030233RPA19755.116ENSGAFG00000020953RPA19254.892Gambusia_affinis
ENSSBOG00000030233RPA19664.748ENSGAFG00000012916rpa19063.978Gambusia_affinis
ENSSBOG00000030233RPA19762.032ENSGACG00000010856rpa19161.250Gasterosteus_aculeatus
ENSSBOG00000030233RPA19973.378ENSGAGG00000013611RPA19772.712Gopherus_agassizii
ENSSBOG00000030233RPA19986.755ENSGGOG00000014186RPA19886.755Gorilla_gorilla
ENSSBOG00000030233RPA19754.707ENSHBUG00000009348RPA19354.270Haplochromis_burtoni
ENSSBOG00000030233RPA19765.000ENSHBUG00000017773rpa19164.413Haplochromis_burtoni
ENSSBOG00000030233RPA19986.047ENSHGLG00000008846RPA19885.904Heterocephalus_glaber_female
ENSSBOG00000030233RPA19986.047ENSHGLG00100017755-9885.904Heterocephalus_glaber_male
ENSSBOG00000030233RPA19973.841ENSHGLG00100002005-9873.719Heterocephalus_glaber_male
ENSSBOG00000030233RPA19981.457ENSHGLG00100000799-9881.457Heterocephalus_glaber_male
ENSSBOG00000030233RPA19745.310ENSHCOG00000000351RPA19045.133Hippocampus_comes
ENSSBOG00000030233RPA19661.189ENSHCOG00000001401rpa19161.947Hippocampus_comes
ENSSBOG00000030233RPA19762.655ENSIPUG00000004400rpa19162.278Ictalurus_punctatus
ENSSBOG00000030233RPA19985.324ENSSTOG00000022475RPA19885.324Ictidomys_tridecemlineatus
ENSSBOG00000030233RPA19790.018ENSJJAG00000000876Rpa19490.018Jaculus_jaculus
ENSSBOG00000030233RPA19662.500ENSKMAG00000005605rpa19061.879Kryptolebias_marmoratus
ENSSBOG00000030233RPA19756.991ENSKMAG00000000234RPA19156.383Kryptolebias_marmoratus
ENSSBOG00000030233RPA19763.993ENSLBEG00000021604rpa19163.214Labrus_bergylta
ENSSBOG00000030233RPA19663.265ENSLBEG00000002281RPA17763.265Labrus_bergylta
ENSSBOG00000030233RPA18667.066ENSLACG00000007210RPA19668.697Latimeria_chalumnae
ENSSBOG00000030233RPA19769.286ENSLOCG00000006397rpa19169.107Lepisosteus_oculatus
ENSSBOG00000030233RPA19984.288ENSLAFG00000015354RPA19884.288Loxodonta_africana
ENSSBOG00000030233RPA18387.921ENSMFAG00000036138-10087.747Macaca_fascicularis
ENSSBOG00000030233RPA19989.735ENSMMUG00000011604-10089.587Macaca_mulatta
ENSSBOG00000030233RPA19984.132ENSMMUG00000002442-9883.609Macaca_mulatta
ENSSBOG00000030233RPA18891.121ENSMNEG00000029837-9891.121Macaca_nemestrina
ENSSBOG00000030233RPA19793.583ENSMNEG00000031632-9493.583Macaca_nemestrina
ENSSBOG00000030233RPA19983.855ENSMLEG00000038768-10083.855Mandrillus_leucophaeus
ENSSBOG00000030233RPA19753.150ENSMAMG00000020097RPA17662.500Mastacembelus_armatus
ENSSBOG00000030233RPA19765.241ENSMAMG00000017993rpa19663.214Mastacembelus_armatus
ENSSBOG00000030233RPA19759.215ENSMZEG00005024731RPA19158.362Maylandia_zebra
ENSSBOG00000030233RPA19765.000ENSMZEG00005007551rpa19761.296Maylandia_zebra
ENSSBOG00000030233RPA19970.744ENSMGAG00000005315RPA19870.462Meleagris_gallopavo
ENSSBOG00000030233RPA19984.833ENSMAUG00000010474Rpa19984.833Mesocricetus_auratus
ENSSBOG00000030233RPA19987.252ENSMICG00000012867RPA19887.252Microcebus_murinus
ENSSBOG00000030233RPA19787.097ENSMOCG00000013019Rpa19883.028Microtus_ochrogaster
ENSSBOG00000030233RPA19763.214ENSMMOG00000014292rpa19463.214Mola_mola
ENSSBOG00000030233RPA19757.245ENSMMOG00000010868RPA19057.245Mola_mola
ENSSBOG00000030233RPA19979.801ENSMODG00000010549RPA19879.801Monodelphis_domestica
ENSSBOG00000030233RPA19764.643ENSMALG00000011453rpa19164.884Monopterus_albus
ENSSBOG00000030233RPA19162.217ENSMALG00000001208RPA17162.217Monopterus_albus
ENSSBOG00000030233RPA19982.947MGP_CAROLIEiJ_G0016734Rpa19882.479Mus_caroli
ENSSBOG00000030233RPA19981.506ENSMUSG00000000751Rpa19881.178Mus_musculus
ENSSBOG00000030233RPA19983.526MGP_PahariEiJ_G0017871Rpa19883.059Mus_pahari
ENSSBOG00000030233RPA19981.536MGP_SPRETEiJ_G0017577Rpa19880.719Mus_spretus
ENSSBOG00000030233RPA19984.272ENSMPUG00000013119RPA19884.272Mustela_putorius_furo
ENSSBOG00000030233RPA19788.414ENSMLUG00000006113RPA19088.414Myotis_lucifugus
ENSSBOG00000030233RPA19787.544ENSNGAG00000004522Rpa19087.544Nannospalax_galili
ENSSBOG00000030233RPA19756.810ENSNBRG00000009672RPA18956.452Neolamprologus_brichardi
ENSSBOG00000030233RPA19763.571ENSNBRG00000020595rpa19663.571Neolamprologus_brichardi
ENSSBOG00000030233RPA19989.570ENSNLEG00000017149RPA19889.570Nomascus_leucogenys
ENSSBOG00000030233RPA110069.917ENSMEUG00000006714RPA19969.587Notamacropus_eugenii
ENSSBOG00000030233RPA19786.842ENSODEG00000009038RPA19286.842Octodon_degus
ENSSBOG00000030233RPA19764.965ENSONIG00000013135rpa19164.613Oreochromis_niloticus
ENSSBOG00000030233RPA19978.607ENSOANG00000010880RPA19978.773Ornithorhynchus_anatinus
ENSSBOG00000030233RPA19981.546ENSOCUG00000001504RPA19881.546Oryctolagus_cuniculus
ENSSBOG00000030233RPA19764.464ENSORLG00000004856rpa19164.043Oryzias_latipes
ENSSBOG00000030233RPA19753.884ENSORLG00000003368RPA17664.155Oryzias_latipes
ENSSBOG00000030233RPA19752.443ENSORLG00020015284RPA17662.780Oryzias_latipes_hni
ENSSBOG00000030233RPA19764.464ENSORLG00020008980rpa19164.043Oryzias_latipes_hni
ENSSBOG00000030233RPA19754.118ENSORLG00015020383RPA19153.729Oryzias_latipes_hsok
ENSSBOG00000030233RPA17560.000ENSORLG00015005867-9860.000Oryzias_latipes_hsok
ENSSBOG00000030233RPA19764.464ENSORLG00015013982rpa19164.043Oryzias_latipes_hsok
ENSSBOG00000030233RPA19762.210ENSOMEG00000004704rpa19161.676Oryzias_melastigma
ENSSBOG00000030233RPA19756.708ENSOMEG00000011040RPA19657.245Oryzias_melastigma
ENSSBOG00000030233RPA19476.923ENSOGAG00000029379-9776.923Otolemur_garnettii
ENSSBOG00000030233RPA19985.430ENSOGAG00000005581-9885.430Otolemur_garnettii
ENSSBOG00000030233RPA19986.258ENSOARG00000014479RPA19886.258Ovis_aries
ENSSBOG00000030233RPA19990.397ENSPPAG00000039680RPA19890.397Pan_paniscus
ENSSBOG00000030233RPA19983.306ENSPPRG00000011807RPA19883.306Panthera_pardus
ENSSBOG00000030233RPA19982.975ENSPTIG00000007898RPA19882.975Panthera_tigris_altaica
ENSSBOG00000030233RPA19990.397ENSPTRG00000008539RPA19890.397Pan_troglodytes
ENSSBOG00000030233RPA19989.901ENSPANG00000024592RPA19889.752Papio_anubis
ENSSBOG00000030233RPA19164.015ENSPKIG00000008053rpa18564.015Paramormyrops_kingsleyae
ENSSBOG00000030233RPA19777.281ENSPSIG00000015617RPA19376.923Pelodiscus_sinensis
ENSSBOG00000030233RPA19657.143ENSPMGG00000000543RPA19755.793Periophthalmus_magnuspinnatus
ENSSBOG00000030233RPA19763.036ENSPMGG00000011589rpa19363.214Periophthalmus_magnuspinnatus
ENSSBOG00000030233RPA19984.359ENSPEMG00000021061Rpa19884.219Peromyscus_maniculatus_bairdii
ENSSBOG00000030233RPA110079.208ENSPCIG00000019049RPA19879.208Phascolarctos_cinereus
ENSSBOG00000030233RPA19665.171ENSPFOG00000003987rpa19064.568Poecilia_formosa
ENSSBOG00000030233RPA19155.732ENSPLAG00000008844-8955.300Poecilia_latipinna
ENSSBOG00000030233RPA19664.991ENSPLAG00000004984rpa19064.568Poecilia_latipinna
ENSSBOG00000030233RPA19665.171ENSPMEG00000020602rpa19764.029Poecilia_mexicana
ENSSBOG00000030233RPA19155.360ENSPMEG00000003627-8855.477Poecilia_mexicana
ENSSBOG00000030233RPA19158.034ENSPREG00000010174rpa18657.386Poecilia_reticulata
ENSSBOG00000030233RPA19753.846ENSPREG00000010119RPA19252.894Poecilia_reticulata
ENSSBOG00000030233RPA19987.583ENSPCOG00000001799RPA19887.583Propithecus_coquereli
ENSSBOG00000030233RPA19985.880ENSPVAG00000002149RPA19885.880Pteropus_vampyrus
ENSSBOG00000030233RPA19758.874ENSPNYG00000024165RPA19158.020Pundamilia_nyererei
ENSSBOG00000030233RPA19765.179ENSPNYG00000016316rpa19763.750Pundamilia_nyererei
ENSSBOG00000030233RPA19755.221ENSPNAG00000008599rpa19355.674Pygocentrus_nattereri
ENSSBOG00000030233RPA19985.990ENSRNOG00000003123Rpa19883.694Rattus_norvegicus
ENSSBOG00000030233RPA19989.256ENSRBIG00000036587RPA19888.742Rhinopithecus_bieti
ENSSBOG00000030233RPA19983.471ENSRROG00000043278RPA19882.947Rhinopithecus_roxellana
ENSSBOG00000030233RPA17438.215YAR007CRFA17038.215Saccharomyces_cerevisiae
ENSSBOG00000030233RPA19979.669ENSSHAG00000007969RPA19780.000Sarcophilus_harrisii
ENSSBOG00000030233RPA19666.248ENSSFOG00015005362rpa18366.068Scleropages_formosus
ENSSBOG00000030233RPA19653.821ENSSMAG00000019746RPA19252.217Scophthalmus_maximus
ENSSBOG00000030233RPA19765.775ENSSDUG00000011949rpa19165.302Seriola_dumerili
ENSSBOG00000030233RPA19754.140ENSSDUG00000016358RPA17465.385Seriola_dumerili
ENSSBOG00000030233RPA19765.954ENSSLDG00000011806rpa19165.125Seriola_lalandi_dorsalis
ENSSBOG00000030233RPA19753.239ENSSLDG00000020784RPA17465.158Seriola_lalandi_dorsalis
ENSSBOG00000030233RPA18985.294ENSSARG00000007506RPA18985.294Sorex_araneus
ENSSBOG00000030233RPA19772.679ENSSPUG00000007223RPA19372.500Sphenodon_punctatus
ENSSBOG00000030233RPA19764.706ENSSPAG00000009903rpa19163.701Stegastes_partitus
ENSSBOG00000030233RPA19758.437ENSSPAG00000011165RPA19357.857Stegastes_partitus
ENSSBOG00000030233RPA19986.070ENSSSCG00000017822RPA110086.070Sus_scrofa
ENSSBOG00000030233RPA19970.579ENSTGUG00000005775RPA19870.462Taeniopygia_guttata
ENSSBOG00000030233RPA19664.401ENSTRUG00000003616rpa19164.401Takifugu_rubripes
ENSSBOG00000030233RPA19756.886ENSTRUG00000000405RPA17162.785Takifugu_rubripes
ENSSBOG00000030233RPA19765.957ENSTNIG00000016199rpa19165.133Tetraodon_nigroviridis
ENSSBOG00000030233RPA17692.063ENSTBEG00000002709RPA17492.063Tupaia_belangeri
ENSSBOG00000030233RPA19984.577ENSTTRG00000001169RPA19884.577Tursiops_truncatus
ENSSBOG00000030233RPA18990.385ENSUAMG00000015676RPA19790.385Ursus_americanus
ENSSBOG00000030233RPA19985.099ENSUMAG00000009328RPA19885.099Ursus_maritimus
ENSSBOG00000030233RPA19983.775ENSVPAG00000009443RPA19883.775Vicugna_pacos
ENSSBOG00000030233RPA19984.768ENSVVUG00000021715RPA19884.768Vulpes_vulpes
ENSSBOG00000030233RPA19969.231ENSXETG00000013538rpa19769.565Xenopus_tropicalis
ENSSBOG00000030233RPA19162.879ENSXCOG00000010068rpa18962.049Xiphophorus_couchianus
ENSSBOG00000030233RPA19756.607ENSXCOG00000009899-9556.071Xiphophorus_couchianus
ENSSBOG00000030233RPA19663.555ENSXMAG00000004102rpa19762.950Xiphophorus_maculatus
ENSSBOG00000030233RPA19763.758ENSXMAG00000010333RPA18463.758Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us