EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030240 (Gene tree)
Gene ID: 101037306
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 175751 bases
Position: chrJH378196.1:6632929-6808679
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000027984	ResIII	PF04851.15	1.4e-06	1	1
ENSSBOP00000028000	BRK	PF07533.16	7.7e-32	1	2
ENSSBOP00000028000	BRK	PF07533.16	7.7e-32	2	2
ENSSBOP00000027984	BRK	PF07533.16	8.4e-31	1	2
ENSSBOP00000027984	BRK	PF07533.16	8.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000044862	CHD9-201	11297	XM_003937268	ENSSBOP00000027984	2897 (aa)	XP_003937317	A0A2K6U7W4
ENSSBOT00000044878	CHD9-203	2895	-	ENSSBOP00000028000	964 (aa)	-	A0A2K6U807
ENSSBOT00000044868	CHD9-202	1392	-	ENSSBOP00000027990	463 (aa)	-	A0A2K6U7Z7

Gene Model

Click here to download ENSSBOG00000030240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030240	CHD9	92	46.844	ENSSBOG00000022089	CHD6	99	71.743
ENSSBOG00000030240	CHD9	84	71.846	ENSSBOG00000021462	CHD7	85	67.869
ENSSBOG00000030240	CHD9	68	68.388	ENSSBOG00000023442	CHD8	76	66.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030240	CHD9	100	98.535	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSSBOG00000030240	CHD9	93	70.107	ENSAPOG00000023034	chd9	98	68.778	Acanthochromis_polyacanthus
ENSSBOG00000030240	CHD9	100	96.703	ENSAMEG00000016232	CHD9	100	95.799	Ailuropoda_melanoleuca
ENSSBOG00000030240	CHD9	92	71.277	ENSACIG00000004097	chd9	73	61.535	Amphilophus_citrinellus
ENSSBOG00000030240	CHD9	93	69.718	ENSAOCG00000005487	chd9	99	68.725	Amphiprion_ocellaris
ENSSBOG00000030240	CHD9	93	70.463	ENSAPEG00000009859	chd9	98	68.644	Amphiprion_percula
ENSSBOG00000030240	CHD9	91	71.429	ENSATEG00000002748	chd9	99	61.918	Anabas_testudineus
ENSSBOG00000030240	CHD9	98	92.308	ENSAPLG00000002826	CHD9	74	85.781	Anas_platyrhynchos
ENSSBOG00000030240	CHD9	98	88.645	ENSACAG00000016150	CHD9	98	80.962	Anolis_carolinensis
ENSSBOG00000030240	CHD9	100	99.206	ENSANAG00000015630	CHD9	100	99.206	Aotus_nancymaae
ENSSBOG00000030240	CHD9	92	69.231	ENSACLG00000016899	chd9	99	61.367	Astatotilapia_calliptera
ENSSBOG00000030240	CHD9	98	70.526	ENSAMXG00000005652	chd9	68	74.671	Astyanax_mexicanus
ENSSBOG00000030240	CHD9	100	97.802	ENSBTAG00000002287	CHD9	100	94.936	Bos_taurus
ENSSBOG00000030240	CHD9	100	99.267	ENSCJAG00000001573	CHD9	100	99.267	Callithrix_jacchus
ENSSBOG00000030240	CHD9	100	97.436	ENSCAFG00000009699	CHD9	100	96.278	Canis_familiaris
ENSSBOG00000030240	CHD9	100	97.436	ENSCAFG00020002879	CHD9	100	97.436	Canis_lupus_dingo
ENSSBOG00000030240	CHD9	100	97.070	ENSTSYG00000007693	CHD9	100	97.070	Carlito_syrichta
ENSSBOG00000030240	CHD9	82	95.161	ENSCAPG00000011604	CHD9	81	80.017	Cavia_aperea
ENSSBOG00000030240	CHD9	100	96.337	ENSCPOG00000036544	CHD9	100	91.523	Cavia_porcellus
ENSSBOG00000030240	CHD9	100	98.859	ENSCCAG00000036178	CHD9	100	98.859	Cebus_capucinus
ENSSBOG00000030240	CHD9	100	98.535	ENSCATG00000036753	CHD9	100	98.535	Cercocebus_atys
ENSSBOG00000030240	CHD9	98	97.802	ENSCLAG00000007137	CHD9	99	97.572	Chinchilla_lanigera
ENSSBOG00000030240	CHD9	100	98.535	ENSCSAG00000005311	CHD9	100	98.174	Chlorocebus_sabaeus
ENSSBOG00000030240	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSSBOG00000030240	CHD9	98	87.179	ENSCPBG00000012459	CHD9	99	91.618	Chrysemys_picta_bellii
ENSSBOG00000030240	CHD9	100	98.535	ENSCANG00000030349	CHD9	100	98.535	Colobus_angolensis_palliatus
ENSSBOG00000030240	CHD9	98	95.971	ENSCGRG00001016150	Chd9	99	91.939	Cricetulus_griseus_chok1gshd
ENSSBOG00000030240	CHD9	98	95.971	ENSCGRG00000012850	Chd9	99	96.416	Cricetulus_griseus_crigri
ENSSBOG00000030240	CHD9	93	68.858	ENSCSEG00000009209	chd9	98	58.846	Cynoglossus_semilaevis
ENSSBOG00000030240	CHD9	91	69.580	ENSCVAG00000016195	chd9	99	60.558	Cyprinodon_variegatus
ENSSBOG00000030240	CHD9	97	69.014	ENSDARG00000074498	chd9	98	67.741	Danio_rerio
ENSSBOG00000030240	CHD9	100	94.505	ENSDNOG00000006045	CHD9	100	94.730	Dasypus_novemcinctus
ENSSBOG00000030240	CHD9	100	93.773	ENSDORG00000008523	-	100	93.502	Dipodomys_ordii
ENSSBOG00000030240	CHD9	94	96.842	ENSETEG00000009565	CHD9	94	96.842	Echinops_telfairi
ENSSBOG00000030240	CHD9	100	96.141	ENSEASG00005014832	CHD9	100	96.141	Equus_asinus_asinus
ENSSBOG00000030240	CHD9	100	97.070	ENSECAG00000011505	CHD9	100	96.039	Equus_caballus
ENSSBOG00000030240	CHD9	83	97.238	ENSEEUG00000014515	CHD9	86	97.238	Erinaceus_europaeus
ENSSBOG00000030240	CHD9	94	70.979	ENSELUG00000006031	chd9	90	70.519	Esox_lucius
ENSSBOG00000030240	CHD9	100	97.070	ENSFCAG00000022534	CHD9	100	97.070	Felis_catus
ENSSBOG00000030240	CHD9	98	91.941	ENSFALG00000013276	CHD9	99	87.713	Ficedula_albicollis
ENSSBOG00000030240	CHD9	100	97.436	ENSFDAG00000021037	CHD9	100	94.797	Fukomys_damarensis
ENSSBOG00000030240	CHD9	91	68.794	ENSFHEG00000006068	chd9	68	74.641	Fundulus_heteroclitus
ENSSBOG00000030240	CHD9	82	69.416	ENSGMOG00000006040	chd9	83	76.934	Gadus_morhua
ENSSBOG00000030240	CHD9	96	85.050	ENSGALG00000039178	CHD9	98	85.375	Gallus_gallus
ENSSBOG00000030240	CHD9	93	68.881	ENSGAFG00000010014	chd9	98	67.871	Gambusia_affinis
ENSSBOG00000030240	CHD9	98	67.483	ENSGACG00000016694	chd9	97	74.274	Gasterosteus_aculeatus
ENSSBOG00000030240	CHD9	98	83.669	ENSGAGG00000001048	-	98	87.546	Gopherus_agassizii
ENSSBOG00000030240	CHD9	100	98.901	ENSGGOG00000014816	CHD9	100	98.901	Gorilla_gorilla
ENSSBOG00000030240	CHD9	92	69.825	ENSHBUG00000023322	chd9	97	69.027	Haplochromis_burtoni
ENSSBOG00000030240	CHD9	100	97.436	ENSHGLG00000014938	CHD9	99	98.035	Heterocephalus_glaber_female
ENSSBOG00000030240	CHD9	100	91.813	ENSHGLG00100007620	-	100	92.674	Heterocephalus_glaber_male
ENSSBOG00000030240	CHD9	91	68.858	ENSHCOG00000000937	chd9	69	73.270	Hippocampus_comes
ENSSBOG00000030240	CHD9	97	73.358	ENSIPUG00000016448	chd9	97	74.453	Ictalurus_punctatus
ENSSBOG00000030240	CHD9	100	97.070	ENSSTOG00000022273	CHD9	99	98.497	Ictidomys_tridecemlineatus
ENSSBOG00000030240	CHD9	100	96.337	ENSJJAG00000015741	-	100	93.098	Jaculus_jaculus
ENSSBOG00000030240	CHD9	92	71.378	ENSKMAG00000016784	chd9	96	60.847	Kryptolebias_marmoratus
ENSSBOG00000030240	CHD9	91	68.662	ENSLBEG00000012077	chd9	98	67.827	Labrus_bergylta
ENSSBOG00000030240	CHD9	98	73.560	ENSLACG00000005557	CHD9	99	72.003	Latimeria_chalumnae
ENSSBOG00000030240	CHD9	98	75.000	ENSLOCG00000007225	chd9	68	79.773	Lepisosteus_oculatus
ENSSBOG00000030240	CHD9	100	95.604	ENSLAFG00000015374	CHD9	100	95.074	Loxodonta_africana
ENSSBOG00000030240	CHD9	100	98.535	ENSMFAG00000041354	CHD9	100	98.535	Macaca_fascicularis
ENSSBOG00000030240	CHD9	100	98.535	ENSMMUG00000016310	CHD9	100	98.535	Macaca_mulatta
ENSSBOG00000030240	CHD9	100	98.208	ENSMNEG00000031494	CHD9	100	98.208	Macaca_nemestrina
ENSSBOG00000030240	CHD9	100	98.535	ENSMLEG00000043219	CHD9	100	98.535	Mandrillus_leucophaeus
ENSSBOG00000030240	CHD9	91	69.014	ENSMAMG00000003909	chd9	99	60.756	Mastacembelus_armatus
ENSSBOG00000030240	CHD9	92	69.825	ENSMZEG00005006581	chd9	97	69.243	Maylandia_zebra
ENSSBOG00000030240	CHD9	98	92.674	ENSMGAG00000004642	CHD9	72	80.754	Meleagris_gallopavo
ENSSBOG00000030240	CHD9	95	91.215	ENSMAUG00000000526	-	98	96.000	Mesocricetus_auratus
ENSSBOG00000030240	CHD9	100	96.416	ENSMICG00000016679	CHD9	100	96.416	Microcebus_murinus
ENSSBOG00000030240	CHD9	98	92.259	ENSMOCG00000010691	-	98	95.604	Microtus_ochrogaster
ENSSBOG00000030240	CHD9	91	70.318	ENSMMOG00000016406	chd9	74	62.778	Mola_mola
ENSSBOG00000030240	CHD9	98	83.566	ENSMODG00000013142	-	99	91.800	Monodelphis_domestica
ENSSBOG00000030240	CHD9	92	64.014	ENSMALG00000013306	chd9	73	62.426	Monopterus_albus
ENSSBOG00000030240	CHD9	98	94.505	MGP_CAROLIEiJ_G0031364	Chd9	99	90.903	Mus_caroli
ENSSBOG00000030240	CHD9	98	94.139	ENSMUSG00000056608	Chd9	99	95.376	Mus_musculus
ENSSBOG00000030240	CHD9	98	94.505	MGP_PahariEiJ_G0022964	Chd9	99	88.796	Mus_pahari
ENSSBOG00000030240	CHD9	98	93.773	MGP_SPRETEiJ_G0032483	Chd9	99	90.518	Mus_spretus
ENSSBOG00000030240	CHD9	100	97.070	ENSMPUG00000003285	CHD9	100	95.968	Mustela_putorius_furo
ENSSBOG00000030240	CHD9	100	97.436	ENSMLUG00000004456	CHD9	100	94.037	Myotis_lucifugus
ENSSBOG00000030240	CHD9	100	92.021	ENSNGAG00000015820	-	100	96.337	Nannospalax_galili
ENSSBOG00000030240	CHD9	92	70.567	ENSNBRG00000009423	chd9	97	68.866	Neolamprologus_brichardi
ENSSBOG00000030240	CHD9	90	98.236	ENSNLEG00000001026	CHD9	100	98.236	Nomascus_leucogenys
ENSSBOG00000030240	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSSBOG00000030240	CHD9	87	98.529	ENSOPRG00000011168	CHD9	85	97.143	Ochotona_princeps
ENSSBOG00000030240	CHD9	99	95.174	ENSODEG00000004466	CHD9	99	95.174	Octodon_degus
ENSSBOG00000030240	CHD9	93	69.474	ENSONIG00000002816	chd9	99	69.711	Oreochromis_niloticus
ENSSBOG00000030240	CHD9	100	93.455	ENSOANG00000013401	CHD9	100	87.259	Ornithorhynchus_anatinus
ENSSBOG00000030240	CHD9	100	96.337	ENSOCUG00000001016	CHD9	99	97.103	Oryctolagus_cuniculus
ENSSBOG00000030240	CHD9	92	70.486	ENSORLG00000013810	chd9	94	69.108	Oryzias_latipes
ENSSBOG00000030240	CHD9	92	73.381	ENSORLG00020020665	chd9	75	62.902	Oryzias_latipes_hni
ENSSBOG00000030240	CHD9	92	70.486	ENSORLG00015019126	chd9	94	69.132	Oryzias_latipes_hsok
ENSSBOG00000030240	CHD9	100	96.703	ENSOGAG00000002110	CHD9	100	95.522	Otolemur_garnettii
ENSSBOG00000030240	CHD9	100	96.014	ENSOARG00000017664	CHD9	100	94.632	Ovis_aries
ENSSBOG00000030240	CHD9	100	98.901	ENSPPAG00000039388	-	100	97.635	Pan_paniscus
ENSSBOG00000030240	CHD9	100	96.703	ENSPPRG00000004801	CHD9	100	96.703	Panthera_pardus
ENSSBOG00000030240	CHD9	100	94.521	ENSPTIG00000021854	CHD9	100	94.487	Panthera_tigris_altaica
ENSSBOG00000030240	CHD9	100	98.901	ENSPTRG00000008113	CHD9	100	98.901	Pan_troglodytes
ENSSBOG00000030240	CHD9	100	98.535	ENSPANG00000019307	CHD9	100	98.535	Papio_anubis
ENSSBOG00000030240	CHD9	94	70.567	ENSPKIG00000025401	-	71	62.951	Paramormyrops_kingsleyae
ENSSBOG00000030240	CHD9	90	73.022	ENSPKIG00000021876	chd9	68	76.523	Paramormyrops_kingsleyae
ENSSBOG00000030240	CHD9	64	84.811	ENSPSIG00000008099	CHD9	99	84.757	Pelodiscus_sinensis
ENSSBOG00000030240	CHD9	96	60.865	ENSPMGG00000021802	chd9	98	73.214	Periophthalmus_magnuspinnatus
ENSSBOG00000030240	CHD9	98	90.986	ENSPEMG00000021464	-	98	96.703	Peromyscus_maniculatus_bairdii
ENSSBOG00000030240	CHD9	65	61.172	ENSPMAG00000006035	-	72	68.035	Petromyzon_marinus
ENSSBOG00000030240	CHD9	89	87.689	ENSPCIG00000017215	CHD9	98	89.749	Phascolarctos_cinereus
ENSSBOG00000030240	CHD9	93	68.531	ENSPFOG00000015839	chd9	97	60.540	Poecilia_formosa
ENSSBOG00000030240	CHD9	93	69.258	ENSPLAG00000011118	chd9	95	69.747	Poecilia_latipinna
ENSSBOG00000030240	CHD9	93	69.611	ENSPMEG00000015106	chd9	96	60.953	Poecilia_mexicana
ENSSBOG00000030240	CHD9	93	69.258	ENSPREG00000006473	chd9	95	69.104	Poecilia_reticulata
ENSSBOG00000030240	CHD9	100	98.535	ENSPPYG00000007348	CHD9	100	98.379	Pongo_abelii
ENSSBOG00000030240	CHD9	77	96.507	ENSPCAG00000007564	CHD9	86	96.507	Procavia_capensis
ENSSBOG00000030240	CHD9	100	97.436	ENSPCOG00000028433	CHD9	100	97.436	Propithecus_coquereli
ENSSBOG00000030240	CHD9	97	92.603	ENSPVAG00000015617	CHD9	98	93.133	Pteropus_vampyrus
ENSSBOG00000030240	CHD9	92	69.825	ENSPNYG00000010947	chd9	99	61.156	Pundamilia_nyererei
ENSSBOG00000030240	CHD9	92	71.273	ENSPNAG00000024141	chd9	68	74.925	Pygocentrus_nattereri
ENSSBOG00000030240	CHD9	88	92.090	ENSRNOG00000049302	Chd9	100	89.968	Rattus_norvegicus
ENSSBOG00000030240	CHD9	100	98.535	ENSRBIG00000035553	CHD9	100	98.593	Rhinopithecus_bieti
ENSSBOG00000030240	CHD9	100	98.535	ENSRROG00000033278	CHD9	100	98.580	Rhinopithecus_roxellana
ENSSBOG00000030240	CHD9	98	90.182	ENSSHAG00000002719	CHD9	100	87.930	Sarcophilus_harrisii
ENSSBOG00000030240	CHD9	93	72.500	ENSSFOG00015020209	chd9	68	76.788	Scleropages_formosus
ENSSBOG00000030240	CHD9	93	71.326	ENSSFOG00015001327	chd9	67	75.515	Scleropages_formosus
ENSSBOG00000030240	CHD9	92	68.182	ENSSMAG00000008953	chd9	97	67.958	Scophthalmus_maximus
ENSSBOG00000030240	CHD9	91	70.423	ENSSDUG00000006139	chd9	98	68.385	Seriola_dumerili
ENSSBOG00000030240	CHD9	92	71.277	ENSSLDG00000017818	chd9	98	68.853	Seriola_lalandi_dorsalis
ENSSBOG00000030240	CHD9	100	95.588	ENSSARG00000010632	CHD9	71	97.346	Sorex_araneus
ENSSBOG00000030240	CHD9	98	85.366	ENSSPUG00000017465	-	98	90.476	Sphenodon_punctatus
ENSSBOG00000030240	CHD9	93	69.718	ENSSPAG00000021649	chd9	97	68.785	Stegastes_partitus
ENSSBOG00000030240	CHD9	90	84.933	ENSTGUG00000007476	CHD9	100	85.315	Taeniopygia_guttata
ENSSBOG00000030240	CHD9	97	71.174	ENSTRUG00000009125	chd9	99	60.369	Takifugu_rubripes
ENSSBOG00000030240	CHD9	75	67.254	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSSBOG00000030240	CHD9	66	95.946	ENSTBEG00000016052	-	81	95.946	Tupaia_belangeri
ENSSBOG00000030240	CHD9	90	94.557	ENSTTRG00000012674	CHD9	90	95.056	Tursiops_truncatus
ENSSBOG00000030240	CHD9	100	97.436	ENSUAMG00000022706	CHD9	100	97.436	Ursus_americanus
ENSSBOG00000030240	CHD9	90	93.277	ENSUMAG00000004043	CHD9	98	98.188	Ursus_maritimus
ENSSBOG00000030240	CHD9	98	95.971	ENSVPAG00000001374	CHD9	97	94.862	Vicugna_pacos
ENSSBOG00000030240	CHD9	100	97.436	ENSVVUG00000019435	CHD9	100	96.347	Vulpes_vulpes
ENSSBOG00000030240	CHD9	98	81.685	ENSXETG00000000349	chd9	96	76.912	Xenopus_tropicalis
ENSSBOG00000030240	CHD9	93	69.258	ENSXCOG00000012997	chd9	95	69.829	Xiphophorus_couchianus
ENSSBOG00000030240	CHD9	93	68.881	ENSXMAG00000016192	chd9	96	70.280	Xiphophorus_maculatus