EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030257 (Gene tree)
Gene ID: 101046896
Gene Symbol: ERCC2
Alias: EM9|MAG|MGC102762|MGC126218|MGC126219|TFIIH|XPD
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 21272 bases
Position: chrJH378232.1:802844-824115
Accession: 3434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000028306	ResIII	PF04851.15	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000045186	ERCC2-204	2046	-	ENSSBOP00000028306	681 (aa)	-	A0A2K6U8S3
ENSSBOT00000045178	ERCC2-202	2280	-	ENSSBOP00000028298	759 (aa)	-	A0A2K6U8S9
ENSSBOT00000045133	ERCC2-201	2481	XM_003940242	ENSSBOP00000028254	782 (aa)	XP_003940291	A0A2K6U8N1
ENSSBOT00000045183	ERCC2-203	2217	-	ENSSBOP00000028303	738 (aa)	-	A0A2K6U8T3
ENSSBOT00000045211	ERCC2-205	1191	-	ENSSBOP00000028331	397 (aa)	-	A0A2K6U8U8

Gene Model

Click here to download ENSSBOG00000030257's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03022	Basal transcription factors	KEGG
sbq03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030257	ERCC2	82	37.931	ENSSBOG00000035665	BRIP1	57	37.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030257	ERCC2	99	99.412	ENSG00000104884	ERCC2	99	99.502	Homo_sapiens
ENSSBOG00000030257	ERCC2	97	84.163	ENSAPOG00000000375	ercc2	99	84.163	Acanthochromis_polyacanthus
ENSSBOG00000030257	ERCC2	99	84.559	ENSACIG00000008002	ercc2	99	84.559	Amphilophus_citrinellus
ENSSBOG00000030257	ERCC2	98	82.733	ENSAOCG00000016153	ercc2	99	82.733	Amphiprion_ocellaris
ENSSBOG00000030257	ERCC2	98	82.733	ENSAPEG00000016712	ercc2	99	82.733	Amphiprion_percula
ENSSBOG00000030257	ERCC2	99	84.389	ENSATEG00000005268	ercc2	99	84.389	Anabas_testudineus
ENSSBOG00000030257	ERCC2	99	99.559	ENSANAG00000022694	ERCC2	99	99.559	Aotus_nancymaae
ENSSBOG00000030257	ERCC2	97	84.766	ENSACLG00000017573	ercc2	99	84.766	Astatotilapia_calliptera
ENSSBOG00000030257	ERCC2	98	84.789	ENSAMXG00000009052	ercc2	99	84.789	Astyanax_mexicanus
ENSSBOG00000030257	ERCC2	99	99.706	ENSCJAG00000012716	ERCC2	99	99.706	Callithrix_jacchus
ENSSBOG00000030257	ERCC2	80	37.931	ENSCJAG00000001292	BRIP1	64	37.931	Callithrix_jacchus
ENSSBOG00000030257	ERCC2	100	98.825	ENSCAFG00020011390	ERCC2	100	98.825	Canis_lupus_dingo
ENSSBOG00000030257	ERCC2	97	81.061	ENSTSYG00000026723	ERCC2	99	81.061	Carlito_syrichta
ENSSBOG00000030257	ERCC2	99	96.934	ENSCCAG00000019831	ERCC2	99	96.934	Cebus_capucinus
ENSSBOG00000030257	ERCC2	82	37.931	ENSCCAG00000024685	BRIP1	59	37.931	Cebus_capucinus
ENSSBOG00000030257	ERCC2	99	99.559	ENSCANG00000040683	ERCC2	99	99.559	Colobus_angolensis_palliatus
ENSSBOG00000030257	ERCC2	98	79.669	ENSCSEG00000006041	ercc2	99	79.669	Cynoglossus_semilaevis
ENSSBOG00000030257	ERCC2	100	95.595	ENSEASG00005013856	ERCC2	100	95.595	Equus_asinus_asinus
ENSSBOG00000030257	ERCC2	98	83.910	ENSELUG00000018055	ercc2	100	83.910	Esox_lucius
ENSSBOG00000030257	ERCC2	99	98.676	ENSFCAG00000002679	ERCC2	99	98.676	Felis_catus
ENSSBOG00000030257	ERCC2	99	84.536	ENSFHEG00000000072	ercc2	99	84.536	Fundulus_heteroclitus
ENSSBOG00000030257	ERCC2	99	84.145	ENSGAGG00000009493	ERCC2	99	84.145	Gopherus_agassizii
ENSSBOG00000030257	ERCC2	99	99.559	ENSGGOG00000015842	ERCC2	99	99.559	Gorilla_gorilla
ENSSBOG00000030257	ERCC2	98	83.958	ENSHBUG00000002187	ercc2	99	83.958	Haplochromis_burtoni
ENSSBOG00000030257	ERCC2	99	83.358	ENSLBEG00000010573	ercc2	92	83.358	Labrus_bergylta
ENSSBOG00000030257	ERCC2	99	99.559	ENSMFAG00000037898	ERCC2	99	99.559	Macaca_fascicularis
ENSSBOG00000030257	ERCC2	99	99.559	ENSMMUG00000014419	ERCC2	99	99.559	Macaca_mulatta
ENSSBOG00000030257	ERCC2	82	39.655	ENSMNEG00000040728	BRIP1	57	39.655	Macaca_nemestrina
ENSSBOG00000030257	ERCC2	99	99.559	ENSMNEG00000042641	ERCC2	99	99.559	Macaca_nemestrina
ENSSBOG00000030257	ERCC2	99	99.558	ENSMLEG00000043492	ERCC2	99	99.558	Mandrillus_leucophaeus
ENSSBOG00000030257	ERCC2	99	84.265	ENSMAMG00000016724	ercc2	99	84.265	Mastacembelus_armatus
ENSSBOG00000030257	ERCC2	98	84.789	ENSMZEG00005024441	ercc2	99	84.789	Maylandia_zebra
ENSSBOG00000030257	ERCC2	99	98.971	ENSMICG00000000635	ERCC2	99	98.971	Microcebus_murinus
ENSSBOG00000030257	ERCC2	99	81.176	ENSMMOG00000005162	ercc2	99	81.176	Mola_mola
ENSSBOG00000030257	ERCC2	99	83.235	ENSMALG00000005990	ercc2	99	83.235	Monopterus_albus
ENSSBOG00000030257	ERCC2	99	98.382	MGP_CAROLIEiJ_G0029287	Ercc2	99	98.382	Mus_caroli
ENSSBOG00000030257	ERCC2	99	98.382	ENSMUSG00000030400	Ercc2	99	98.382	Mus_musculus
ENSSBOG00000030257	ERCC2	99	98.382	MGP_PahariEiJ_G0021147	Ercc2	99	98.382	Mus_pahari
ENSSBOG00000030257	ERCC2	99	98.235	MGP_SPRETEiJ_G0030371	Ercc2	99	98.235	Mus_spretus
ENSSBOG00000030257	ERCC2	99	99.559	ENSPPAG00000044005	ERCC2	99	99.559	Pan_paniscus
ENSSBOG00000030257	ERCC2	100	93.098	ENSPPRG00000000507	ERCC2	100	93.539	Panthera_pardus
ENSSBOG00000030257	ERCC2	99	99.559	ENSPTRG00000011149	ERCC2	99	99.559	Pan_troglodytes
ENSSBOG00000030257	ERCC2	99	99.558	ENSPANG00000032195	ERCC2	99	99.558	Papio_anubis
ENSSBOG00000030257	ERCC2	99	80.118	ENSPKIG00000006883	ercc2	98	80.118	Paramormyrops_kingsleyae
ENSSBOG00000030257	ERCC2	98	83.886	ENSPMGG00000000223	ercc2	99	83.886	Periophthalmus_magnuspinnatus
ENSSBOG00000030257	ERCC2	99	84.536	ENSPLAG00000002626	ercc2	99	84.536	Poecilia_latipinna
ENSSBOG00000030257	ERCC2	99	84.536	ENSPMEG00000002858	ercc2	99	84.536	Poecilia_mexicana
ENSSBOG00000030257	ERCC2	99	79.971	ENSPREG00000019280	ercc2	99	79.971	Poecilia_reticulata
ENSSBOG00000030257	ERCC2	97	84.084	ENSPNYG00000022007	ercc2	99	84.084	Pundamilia_nyererei
ENSSBOG00000030257	ERCC2	98	84.211	ENSPNAG00000010434	ercc2	100	84.211	Pygocentrus_nattereri
ENSSBOG00000030257	ERCC2	99	99.559	ENSRROG00000040423	ERCC2	99	99.559	Rhinopithecus_roxellana
ENSSBOG00000030257	ERCC2	97	78.411	ENSSMAG00000019720	ercc2	99	78.411	Scophthalmus_maximus
ENSSBOG00000030257	ERCC2	98	83.584	ENSSDUG00000002397	ercc2	99	83.584	Seriola_dumerili
ENSSBOG00000030257	ERCC2	98	83.735	ENSSLDG00000020353	ercc2	99	83.735	Seriola_lalandi_dorsalis
ENSSBOG00000030257	ERCC2	99	84.412	ENSSPAG00000002074	ercc2	99	84.412	Stegastes_partitus
ENSSBOG00000030257	ERCC2	99	83.971	ENSTRUG00000007303	ercc2	99	83.971	Takifugu_rubripes
ENSSBOG00000030257	ERCC2	100	98.238	ENSUAMG00000019562	ERCC2	100	98.238	Ursus_americanus
ENSSBOG00000030257	ERCC2	99	80.265	ENSXMAG00000003922	ercc2	99	80.265	Xiphophorus_maculatus