EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030413 (Gene tree)
Gene ID: 101040090
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 11408 bases
Position: chrJH378113.1:14590981-14602388
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000028042	PseudoU_synth_2	PF00849.22	1.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000044921	RPUSD4-201	2913	XM_003923528	ENSSBOP00000028042	372 (aa)	XP_003923577	A0A2K6U7Z6

Gene Model

Click here to download ENSSBOG00000030413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030413	RPUSD4	73	30.104	ENSSBOG00000036106	RPUSD3	79	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030413	RPUSD4	100	88.441	ENSG00000165526	RPUSD4	99	88.441	Homo_sapiens
ENSSBOG00000030413	RPUSD4	87	51.220	ENSAPOG00000011024	rpusd4	82	51.220	Acanthochromis_polyacanthus
ENSSBOG00000030413	RPUSD4	62	82.258	ENSAMEG00000005953	-	97	82.258	Ailuropoda_melanoleuca
ENSSBOG00000030413	RPUSD4	99	81.402	ENSAMEG00000000127	-	98	81.402	Ailuropoda_melanoleuca
ENSSBOG00000030413	RPUSD4	87	48.024	ENSACIG00000003533	rpusd4	96	48.024	Amphilophus_citrinellus
ENSSBOG00000030413	RPUSD4	89	50.595	ENSAOCG00000015409	rpusd4	83	50.595	Amphiprion_ocellaris
ENSSBOG00000030413	RPUSD4	89	50.595	ENSAPEG00000018935	rpusd4	83	50.595	Amphiprion_percula
ENSSBOG00000030413	RPUSD4	87	49.695	ENSATEG00000008059	rpusd4	81	49.695	Anabas_testudineus
ENSSBOG00000030413	RPUSD4	74	61.290	ENSAPLG00000013250	RPUSD4	99	60.000	Anas_platyrhynchos
ENSSBOG00000030413	RPUSD4	93	64.080	ENSACAG00000000189	RPUSD4	91	65.465	Anolis_carolinensis
ENSSBOG00000030413	RPUSD4	100	94.355	ENSANAG00000024050	RPUSD4	100	94.355	Aotus_nancymaae
ENSSBOG00000030413	RPUSD4	88	49.245	ENSACLG00000020996	rpusd4	84	49.245	Astatotilapia_calliptera
ENSSBOG00000030413	RPUSD4	91	48.266	ENSAMXG00000031479	rpusd4	95	48.961	Astyanax_mexicanus
ENSSBOG00000030413	RPUSD4	99	77.957	ENSBTAG00000020900	RPUSD4	98	77.957	Bos_taurus
ENSSBOG00000030413	RPUSD4	99	94.595	ENSCJAG00000042850	RPUSD4	93	94.595	Callithrix_jacchus
ENSSBOG00000030413	RPUSD4	99	79.784	ENSCAFG00000010488	RPUSD4	98	79.784	Canis_familiaris
ENSSBOG00000030413	RPUSD4	99	79.784	ENSCAFG00020010621	RPUSD4	98	79.784	Canis_lupus_dingo
ENSSBOG00000030413	RPUSD4	99	77.480	ENSCHIG00000009975	RPUSD4	98	77.480	Capra_hircus
ENSSBOG00000030413	RPUSD4	99	84.865	ENSTSYG00000008456	RPUSD4	98	84.865	Carlito_syrichta
ENSSBOG00000030413	RPUSD4	68	77.866	ENSCAPG00000006040	RPUSD4	98	77.866	Cavia_aperea
ENSSBOG00000030413	RPUSD4	100	78.763	ENSCPOG00000014971	RPUSD4	99	78.763	Cavia_porcellus
ENSSBOG00000030413	RPUSD4	100	94.355	ENSCCAG00000027838	RPUSD4	100	94.355	Cebus_capucinus
ENSSBOG00000030413	RPUSD4	100	87.903	ENSCATG00000041570	RPUSD4	99	87.903	Cercocebus_atys
ENSSBOG00000030413	RPUSD4	100	81.183	ENSCLAG00000016553	RPUSD4	99	81.183	Chinchilla_lanigera
ENSSBOG00000030413	RPUSD4	100	87.903	ENSCSAG00000002274	RPUSD4	99	87.903	Chlorocebus_sabaeus
ENSSBOG00000030413	RPUSD4	74	82.671	ENSCHOG00000010249	RPUSD4	98	82.671	Choloepus_hoffmanni
ENSSBOG00000030413	RPUSD4	76	68.310	ENSCPBG00000011175	RPUSD4	98	68.310	Chrysemys_picta_bellii
ENSSBOG00000030413	RPUSD4	72	42.806	ENSCSAVG00000000872	-	54	42.806	Ciona_savignyi
ENSSBOG00000030413	RPUSD4	100	87.097	ENSCANG00000039684	RPUSD4	99	87.097	Colobus_angolensis_palliatus
ENSSBOG00000030413	RPUSD4	100	82.258	ENSCGRG00001024141	Rpusd4	99	82.258	Cricetulus_griseus_chok1gshd
ENSSBOG00000030413	RPUSD4	100	82.258	ENSCGRG00000014415	Rpusd4	99	82.258	Cricetulus_griseus_crigri
ENSSBOG00000030413	RPUSD4	52	42.051	ENSCSEG00000006462	-	85	42.051	Cynoglossus_semilaevis
ENSSBOG00000030413	RPUSD4	89	49.112	ENSCVAG00000000392	rpusd4	95	49.112	Cyprinodon_variegatus
ENSSBOG00000030413	RPUSD4	89	48.817	ENSCVAG00000008761	rpusd4	86	48.817	Cyprinodon_variegatus
ENSSBOG00000030413	RPUSD4	92	46.512	ENSDARG00000012674	rpusd4	96	46.512	Danio_rerio
ENSSBOG00000030413	RPUSD4	99	76.280	ENSDNOG00000020026	RPUSD4	98	76.280	Dasypus_novemcinctus
ENSSBOG00000030413	RPUSD4	99	80.863	ENSDORG00000016717	Rpusd4	98	80.863	Dipodomys_ordii
ENSSBOG00000030413	RPUSD4	99	78.862	ENSETEG00000013953	RPUSD4	98	78.862	Echinops_telfairi
ENSSBOG00000030413	RPUSD4	99	81.132	ENSEASG00005022982	RPUSD4	98	81.132	Equus_asinus_asinus
ENSSBOG00000030413	RPUSD4	99	80.863	ENSECAG00000000557	RPUSD4	98	80.863	Equus_caballus
ENSSBOG00000030413	RPUSD4	81	77.717	ENSEEUG00000014036	RPUSD4	80	77.717	Erinaceus_europaeus
ENSSBOG00000030413	RPUSD4	94	51.087	ENSELUG00000008075	rpusd4	96	51.087	Esox_lucius
ENSSBOG00000030413	RPUSD4	99	81.671	ENSFCAG00000029789	RPUSD4	98	81.671	Felis_catus
ENSSBOG00000030413	RPUSD4	90	57.270	ENSFALG00000005171	RPUSD4	99	57.270	Ficedula_albicollis
ENSSBOG00000030413	RPUSD4	100	80.645	ENSFDAG00000014307	RPUSD4	99	80.645	Fukomys_damarensis
ENSSBOG00000030413	RPUSD4	88	49.850	ENSFHEG00000004329	rpusd4	86	49.850	Fundulus_heteroclitus
ENSSBOG00000030413	RPUSD4	87	50.613	ENSGMOG00000017726	rpusd4	96	50.613	Gadus_morhua
ENSSBOG00000030413	RPUSD4	75	63.475	ENSGALG00000024326	RPUSD4	95	58.112	Gallus_gallus
ENSSBOG00000030413	RPUSD4	90	45.797	ENSGAFG00000021559	rpusd4	87	45.797	Gambusia_affinis
ENSSBOG00000030413	RPUSD4	90	47.059	ENSGACG00000001657	rpusd4	100	47.059	Gasterosteus_aculeatus
ENSSBOG00000030413	RPUSD4	90	63.095	ENSGAGG00000000132	RPUSD4	93	63.095	Gopherus_agassizii
ENSSBOG00000030413	RPUSD4	100	88.172	ENSGGOG00000016494	RPUSD4	99	88.172	Gorilla_gorilla
ENSSBOG00000030413	RPUSD4	94	46.174	ENSHBUG00000022838	rpusd4	97	46.174	Haplochromis_burtoni
ENSSBOG00000030413	RPUSD4	100	81.720	ENSHGLG00000002285	RPUSD4	99	81.720	Heterocephalus_glaber_female
ENSSBOG00000030413	RPUSD4	100	81.720	ENSHGLG00100006385	RPUSD4	99	81.720	Heterocephalus_glaber_male
ENSSBOG00000030413	RPUSD4	87	50.610	ENSHCOG00000006612	rpusd4	83	50.610	Hippocampus_comes
ENSSBOG00000030413	RPUSD4	87	51.534	ENSIPUG00000023879	rusd4	84	51.534	Ictalurus_punctatus
ENSSBOG00000030413	RPUSD4	98	83.242	ENSSTOG00000025280	RPUSD4	100	83.242	Ictidomys_tridecemlineatus
ENSSBOG00000030413	RPUSD4	100	80.914	ENSJJAG00000018673	Rpusd4	100	80.914	Jaculus_jaculus
ENSSBOG00000030413	RPUSD4	88	52.239	ENSKMAG00000021805	rpusd4	87	52.239	Kryptolebias_marmoratus
ENSSBOG00000030413	RPUSD4	87	49.085	ENSLBEG00000020394	rpusd4	91	49.085	Labrus_bergylta
ENSSBOG00000030413	RPUSD4	87	61.656	ENSLACG00000011028	RPUSD4	82	61.656	Latimeria_chalumnae
ENSSBOG00000030413	RPUSD4	87	47.273	ENSLOCG00000003124	rpusd4	87	47.273	Lepisosteus_oculatus
ENSSBOG00000030413	RPUSD4	99	81.452	ENSLAFG00000005211	RPUSD4	98	81.671	Loxodonta_africana
ENSSBOG00000030413	RPUSD4	100	87.634	ENSMFAG00000039513	RPUSD4	99	87.634	Macaca_fascicularis
ENSSBOG00000030413	RPUSD4	100	87.366	ENSMMUG00000007933	RPUSD4	99	87.366	Macaca_mulatta
ENSSBOG00000030413	RPUSD4	100	87.366	ENSMNEG00000027414	RPUSD4	99	87.366	Macaca_nemestrina
ENSSBOG00000030413	RPUSD4	100	87.366	ENSMLEG00000042461	RPUSD4	99	87.366	Mandrillus_leucophaeus
ENSSBOG00000030413	RPUSD4	97	45.161	ENSMAMG00000023839	rpusd4	96	45.161	Mastacembelus_armatus
ENSSBOG00000030413	RPUSD4	88	49.245	ENSMZEG00005011999	rpusd4	84	49.245	Maylandia_zebra
ENSSBOG00000030413	RPUSD4	75	61.429	ENSMGAG00000000840	RPUSD4	99	58.642	Meleagris_gallopavo
ENSSBOG00000030413	RPUSD4	100	80.376	ENSMAUG00000010280	Rpusd4	99	80.376	Mesocricetus_auratus
ENSSBOG00000030413	RPUSD4	100	82.258	ENSMICG00000015979	RPUSD4	99	82.258	Microcebus_murinus
ENSSBOG00000030413	RPUSD4	100	78.763	ENSMOCG00000000661	Rpusd4	99	78.763	Microtus_ochrogaster
ENSSBOG00000030413	RPUSD4	82	51.935	ENSMMOG00000021731	rpusd4	92	51.935	Mola_mola
ENSSBOG00000030413	RPUSD4	93	74.566	ENSMODG00000004521	RPUSD4	89	74.566	Monodelphis_domestica
ENSSBOG00000030413	RPUSD4	80	51.987	ENSMALG00000005839	rpusd4	97	50.155	Monopterus_albus
ENSSBOG00000030413	RPUSD4	100	80.914	MGP_CAROLIEiJ_G0031954	Rpusd4	99	80.914	Mus_caroli
ENSSBOG00000030413	RPUSD4	100	80.376	ENSMUSG00000032044	Rpusd4	99	80.376	Mus_musculus
ENSSBOG00000030413	RPUSD4	100	80.376	MGP_PahariEiJ_G0014819	Rpusd4	99	80.376	Mus_pahari
ENSSBOG00000030413	RPUSD4	100	80.645	MGP_SPRETEiJ_G0033078	Rpusd4	99	80.645	Mus_spretus
ENSSBOG00000030413	RPUSD4	99	79.515	ENSMPUG00000006608	RPUSD4	99	79.515	Mustela_putorius_furo
ENSSBOG00000030413	RPUSD4	98	81.644	ENSMLUG00000017328	-	96	81.644	Myotis_lucifugus
ENSSBOG00000030413	RPUSD4	68	83.858	ENSMLUG00000029348	-	100	83.858	Myotis_lucifugus
ENSSBOG00000030413	RPUSD4	99	79.784	ENSNGAG00000020847	Rpusd4	98	79.784	Nannospalax_galili
ENSSBOG00000030413	RPUSD4	87	49.848	ENSNBRG00000005207	rpusd4	95	49.848	Neolamprologus_brichardi
ENSSBOG00000030413	RPUSD4	100	87.366	ENSNLEG00000007465	RPUSD4	99	87.366	Nomascus_leucogenys
ENSSBOG00000030413	RPUSD4	100	72.043	ENSMEUG00000004370	RPUSD4	99	72.043	Notamacropus_eugenii
ENSSBOG00000030413	RPUSD4	71	59.623	ENSOPRG00000013141	-	100	59.623	Ochotona_princeps
ENSSBOG00000030413	RPUSD4	100	79.301	ENSODEG00000004577	RPUSD4	99	79.301	Octodon_degus
ENSSBOG00000030413	RPUSD4	90	49.271	ENSONIG00000018879	rpusd4	92	49.271	Oreochromis_niloticus
ENSSBOG00000030413	RPUSD4	78	71.186	ENSOANG00000007247	RPUSD4	95	71.044	Ornithorhynchus_anatinus
ENSSBOG00000030413	RPUSD4	98	81.593	ENSOCUG00000017039	RPUSD4	97	81.593	Oryctolagus_cuniculus
ENSSBOG00000030413	RPUSD4	87	49.240	ENSORLG00000002750	rpusd4	91	48.193	Oryzias_latipes
ENSSBOG00000030413	RPUSD4	89	47.478	ENSORLG00020002044	rpusd4	83	47.478	Oryzias_latipes_hni
ENSSBOG00000030413	RPUSD4	89	48.225	ENSORLG00015020034	rpusd4	83	48.225	Oryzias_latipes_hsok
ENSSBOG00000030413	RPUSD4	89	49.408	ENSOMEG00000004861	rpusd4	83	49.408	Oryzias_melastigma
ENSSBOG00000030413	RPUSD4	100	80.161	ENSOGAG00000008922	RPUSD4	99	80.161	Otolemur_garnettii
ENSSBOG00000030413	RPUSD4	97	78.297	ENSOARG00000012238	RPUSD4	96	78.297	Ovis_aries
ENSSBOG00000030413	RPUSD4	100	88.710	ENSPPAG00000042883	RPUSD4	92	88.710	Pan_paniscus
ENSSBOG00000030413	RPUSD4	99	81.671	ENSPPRG00000003081	RPUSD4	98	81.671	Panthera_pardus
ENSSBOG00000030413	RPUSD4	99	81.671	ENSPTIG00000012059	RPUSD4	98	81.671	Panthera_tigris_altaica
ENSSBOG00000030413	RPUSD4	100	88.441	ENSPTRG00000004454	RPUSD4	99	88.441	Pan_troglodytes
ENSSBOG00000030413	RPUSD4	100	87.366	ENSPANG00000015040	RPUSD4	99	87.366	Papio_anubis
ENSSBOG00000030413	RPUSD4	89	55.389	ENSPKIG00000023986	rpusd4	85	55.389	Paramormyrops_kingsleyae
ENSSBOG00000030413	RPUSD4	80	68.121	ENSPSIG00000014268	RPUSD4	95	68.121	Pelodiscus_sinensis
ENSSBOG00000030413	RPUSD4	87	48.936	ENSPMGG00000002806	rpusd4	91	48.780	Periophthalmus_magnuspinnatus
ENSSBOG00000030413	RPUSD4	100	73.387	ENSPEMG00000000278	Rpusd4	99	73.387	Peromyscus_maniculatus_bairdii
ENSSBOG00000030413	RPUSD4	82	44.543	ENSPMAG00000008183	rpusd4	98	44.543	Petromyzon_marinus
ENSSBOG00000030413	RPUSD4	98	73.626	ENSPCIG00000010212	RPUSD4	100	73.626	Phascolarctos_cinereus
ENSSBOG00000030413	RPUSD4	90	47.262	ENSPFOG00000019030	rpusd4	90	47.262	Poecilia_formosa
ENSSBOG00000030413	RPUSD4	90	47.826	ENSPLAG00000016848	rpusd4	87	47.826	Poecilia_latipinna
ENSSBOG00000030413	RPUSD4	90	46.667	ENSPMEG00000017534	rpusd4	87	46.667	Poecilia_mexicana
ENSSBOG00000030413	RPUSD4	87	48.048	ENSPREG00000005689	rpusd4	85	48.048	Poecilia_reticulata
ENSSBOG00000030413	RPUSD4	100	88.710	ENSPPYG00000004043	RPUSD4	99	88.710	Pongo_abelii
ENSSBOG00000030413	RPUSD4	81	77.297	ENSPCAG00000000753	RPUSD4	82	77.297	Procavia_capensis
ENSSBOG00000030413	RPUSD4	99	75.741	ENSPCOG00000020694	RPUSD4	100	75.741	Propithecus_coquereli
ENSSBOG00000030413	RPUSD4	99	81.471	ENSPVAG00000000988	RPUSD4	98	81.471	Pteropus_vampyrus
ENSSBOG00000030413	RPUSD4	94	45.910	ENSPNYG00000009652	rpusd4	97	45.910	Pundamilia_nyererei
ENSSBOG00000030413	RPUSD4	91	50.588	ENSPNAG00000012264	rpusd4	89	50.588	Pygocentrus_nattereri
ENSSBOG00000030413	RPUSD4	100	81.720	ENSRNOG00000011567	Rpusd4	99	81.720	Rattus_norvegicus
ENSSBOG00000030413	RPUSD4	97	89.197	ENSRBIG00000034842	RPUSD4	99	87.903	Rhinopithecus_bieti
ENSSBOG00000030413	RPUSD4	97	89.197	ENSRROG00000039753	RPUSD4	99	87.903	Rhinopithecus_roxellana
ENSSBOG00000030413	RPUSD4	81	78.073	ENSSHAG00000008304	RPUSD4	99	78.073	Sarcophilus_harrisii
ENSSBOG00000030413	RPUSD4	91	53.602	ENSSFOG00015006203	rpusd4	93	54.179	Scleropages_formosus
ENSSBOG00000030413	RPUSD4	90	48.094	ENSSMAG00000020978	rpusd4	88	48.503	Scophthalmus_maximus
ENSSBOG00000030413	RPUSD4	90	47.507	ENSSDUG00000013399	rpusd4	89	47.507	Seriola_dumerili
ENSSBOG00000030413	RPUSD4	90	47.214	ENSSLDG00000023507	rpusd4	89	47.214	Seriola_lalandi_dorsalis
ENSSBOG00000030413	RPUSD4	94	62.500	ENSSPUG00000001401	RPUSD4	95	62.784	Sphenodon_punctatus
ENSSBOG00000030413	RPUSD4	95	47.656	ENSSPAG00000012163	rpusd4	97	47.656	Stegastes_partitus
ENSSBOG00000030413	RPUSD4	99	79.784	ENSSSCG00000015233	RPUSD4	98	79.784	Sus_scrofa
ENSSBOG00000030413	RPUSD4	79	61.279	ENSTGUG00000000773	RPUSD4	99	61.279	Taeniopygia_guttata
ENSSBOG00000030413	RPUSD4	87	48.485	ENSTRUG00000012283	rpusd4	84	48.485	Takifugu_rubripes
ENSSBOG00000030413	RPUSD4	88	47.590	ENSTNIG00000014676	rpusd4	84	47.590	Tetraodon_nigroviridis
ENSSBOG00000030413	RPUSD4	99	78.976	ENSTTRG00000001555	RPUSD4	98	78.976	Tursiops_truncatus
ENSSBOG00000030413	RPUSD4	50	82.258	ENSUAMG00000005503	-	97	82.258	Ursus_americanus
ENSSBOG00000030413	RPUSD4	99	80.863	ENSUMAG00000002219	RPUSD4	98	80.863	Ursus_maritimus
ENSSBOG00000030413	RPUSD4	71	80.000	ENSVPAG00000001066	RPUSD4	100	80.000	Vicugna_pacos
ENSSBOG00000030413	RPUSD4	99	79.301	ENSVVUG00000020101	RPUSD4	98	79.301	Vulpes_vulpes
ENSSBOG00000030413	RPUSD4	88	48.071	ENSXCOG00000004676	rpusd4	88	47.774	Xiphophorus_couchianus
ENSSBOG00000030413	RPUSD4	88	48.071	ENSXMAG00000023351	rpusd4	85	48.071	Xiphophorus_maculatus