EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030500 (Gene tree)
Gene ID: 101033991
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 9222 bases
Position: chrJH378293.1:422646-431867
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000028189	Exo_endo_phos	PF03372.23	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000045068	-	2358	XM_003943701	ENSSBOP00000028189	518 (aa)	XP_003943750	A0A2K6U8G8

Gene Model

Click here to download ENSSBOG00000030500's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030500	-	96	77.400	ENSSBOG00000003489	-	99	77.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030500	-	100	95.174	ENSG00000169188	APEX2	100	95.174	Homo_sapiens
ENSSBOG00000030500	-	99	45.263	ENSAPOG00000005805	apex2	99	45.105	Acanthochromis_polyacanthus
ENSSBOG00000030500	-	100	85.934	ENSAMEG00000003608	APEX2	100	84.942	Ailuropoda_melanoleuca
ENSSBOG00000030500	-	99	45.993	ENSACIG00000010000	apex2	99	45.470	Amphilophus_citrinellus
ENSSBOG00000030500	-	99	45.263	ENSAOCG00000021774	apex2	99	45.455	Amphiprion_ocellaris
ENSSBOG00000030500	-	99	45.088	ENSAPEG00000020890	apex2	93	45.105	Amphiprion_percula
ENSSBOG00000030500	-	99	44.940	ENSATEG00000023600	apex2	99	44.425	Anabas_testudineus
ENSSBOG00000030500	-	99	52.124	ENSACAG00000011201	APEX2	99	52.317	Anolis_carolinensis
ENSSBOG00000030500	-	97	85.487	ENSANAG00000020845	-	100	85.288	Aotus_nancymaae
ENSSBOG00000030500	-	100	98.069	ENSANAG00000021907	-	100	98.069	Aotus_nancymaae
ENSSBOG00000030500	-	99	45.246	ENSAMXG00000007422	apex2	99	45.599	Astyanax_mexicanus
ENSSBOG00000030500	-	100	84.942	ENSBTAG00000013177	APEX2	100	84.170	Bos_taurus
ENSSBOG00000030500	-	100	97.683	ENSCJAG00000016584	APEX2	100	97.683	Callithrix_jacchus
ENSSBOG00000030500	-	100	84.749	ENSCAFG00000014310	APEX2	100	84.749	Canis_familiaris
ENSSBOG00000030500	-	100	86.100	ENSCAFG00020013818	APEX2	100	86.100	Canis_lupus_dingo
ENSSBOG00000030500	-	100	84.363	ENSCHIG00000019916	APEX2	100	83.591	Capra_hircus
ENSSBOG00000030500	-	100	86.486	ENSTSYG00000005612	APEX2	100	86.486	Carlito_syrichta
ENSSBOG00000030500	-	100	77.992	ENSCPOG00000007265	APEX2	100	77.992	Cavia_porcellus
ENSSBOG00000030500	-	97	82.800	ENSCCAG00000025405	-	99	82.800	Cebus_capucinus
ENSSBOG00000030500	-	100	94.402	ENSCATG00000044854	APEX2	100	94.402	Cercocebus_atys
ENSSBOG00000030500	-	100	79.151	ENSCLAG00000017315	APEX2	100	79.151	Chinchilla_lanigera
ENSSBOG00000030500	-	100	94.208	ENSCSAG00000012124	APEX2	100	94.208	Chlorocebus_sabaeus
ENSSBOG00000030500	-	99	48.473	ENSCPBG00000016631	APEX2	99	49.031	Chrysemys_picta_bellii
ENSSBOG00000030500	-	99	38.577	ENSCSAVG00000006052	-	99	38.764	Ciona_savignyi
ENSSBOG00000030500	-	100	93.436	ENSCANG00000003053	APEX2	100	93.436	Colobus_angolensis_palliatus
ENSSBOG00000030500	-	100	80.116	ENSCGRG00001008132	Apex2	100	80.116	Cricetulus_griseus_chok1gshd
ENSSBOG00000030500	-	100	80.116	ENSCGRG00000009667	Apex2	100	80.116	Cricetulus_griseus_crigri
ENSSBOG00000030500	-	99	45.533	ENSCSEG00000019900	apex2	98	45.189	Cynoglossus_semilaevis
ENSSBOG00000030500	-	99	43.890	ENSCVAG00000021583	apex2	99	44.234	Cyprinodon_variegatus
ENSSBOG00000030500	-	99	45.263	ENSDARG00000008472	apex2	99	45.167	Danio_rerio
ENSSBOG00000030500	-	100	81.660	ENSDNOG00000038901	APEX2	100	81.660	Dasypus_novemcinctus
ENSSBOG00000030500	-	99	46.615	ENSEBUG00000015654	apex2	99	46.035	Eptatretus_burgeri
ENSSBOG00000030500	-	100	86.680	ENSEASG00005011694	APEX2	91	86.680	Equus_asinus_asinus
ENSSBOG00000030500	-	100	86.680	ENSECAG00000026921	APEX2	91	86.680	Equus_caballus
ENSSBOG00000030500	-	100	77.500	ENSEEUG00000013172	APEX2	100	77.115	Erinaceus_europaeus
ENSSBOG00000030500	-	99	44.237	ENSELUG00000021417	apex2	99	43.898	Esox_lucius
ENSSBOG00000030500	-	100	84.942	ENSFCAG00000021990	APEX2	100	84.942	Felis_catus
ENSSBOG00000030500	-	100	80.695	ENSFDAG00000008076	APEX2	100	80.695	Fukomys_damarensis
ENSSBOG00000030500	-	99	40.885	ENSFHEG00000021411	apex2	99	40.708	Fundulus_heteroclitus
ENSSBOG00000030500	-	52	56.522	ENSGMOG00000019681	apex2	73	56.522	Gadus_morhua
ENSSBOG00000030500	-	99	44.599	ENSGAFG00000005829	apex2	99	44.948	Gambusia_affinis
ENSSBOG00000030500	-	61	61.376	ENSGACG00000012307	apex2	64	60.104	Gasterosteus_aculeatus
ENSSBOG00000030500	-	90	45.380	ENSGAGG00000011520	APEX2	92	45.399	Gopherus_agassizii
ENSSBOG00000030500	-	100	94.595	ENSGGOG00000002056	APEX2	100	94.595	Gorilla_gorilla
ENSSBOG00000030500	-	99	45.471	ENSHBUG00000009938	apex2	99	45.471	Haplochromis_burtoni
ENSSBOG00000030500	-	100	80.309	ENSHGLG00000000273	APEX2	100	80.309	Heterocephalus_glaber_female
ENSSBOG00000030500	-	99	47.378	ENSHCOG00000010165	apex2	99	47.378	Hippocampus_comes
ENSSBOG00000030500	-	99	44.556	ENSIPUG00000000352	APEX2	99	44.389	Ictalurus_punctatus
ENSSBOG00000030500	-	100	83.398	ENSSTOG00000025121	APEX2	100	83.398	Ictidomys_tridecemlineatus
ENSSBOG00000030500	-	100	80.347	ENSJJAG00000019611	Apex2	100	80.347	Jaculus_jaculus
ENSSBOG00000030500	-	99	47.957	ENSKMAG00000006985	apex2	99	47.957	Kryptolebias_marmoratus
ENSSBOG00000030500	-	99	44.828	ENSLBEG00000012139	apex2	99	43.966	Labrus_bergylta
ENSSBOG00000030500	-	99	42.707	ENSLACG00000000865	APEX2	99	42.199	Latimeria_chalumnae
ENSSBOG00000030500	-	99	45.941	ENSLOCG00000014467	apex2	99	46.287	Lepisosteus_oculatus
ENSSBOG00000030500	-	100	83.784	ENSLAFG00000018312	APEX2	100	83.784	Loxodonta_africana
ENSSBOG00000030500	-	100	94.402	ENSMFAG00000002486	APEX2	100	94.402	Macaca_fascicularis
ENSSBOG00000030500	-	100	94.402	ENSMMUG00000008428	APEX2	100	94.402	Macaca_mulatta
ENSSBOG00000030500	-	100	94.402	ENSMNEG00000036783	APEX2	100	94.402	Macaca_nemestrina
ENSSBOG00000030500	-	100	94.402	ENSMLEG00000028208	APEX2	100	94.402	Mandrillus_leucophaeus
ENSSBOG00000030500	-	99	43.633	ENSMAMG00000024220	apex2	84	53.552	Mastacembelus_armatus
ENSSBOG00000030500	-	99	45.971	ENSMZEG00005026322	apex2	99	45.704	Maylandia_zebra
ENSSBOG00000030500	-	100	84.749	ENSMICG00000043181	APEX2	100	84.749	Microcebus_murinus
ENSSBOG00000030500	-	100	79.344	ENSMOCG00000004339	Apex2	100	79.344	Microtus_ochrogaster
ENSSBOG00000030500	-	99	44.214	ENSMMOG00000017340	apex2	99	44.732	Mola_mola
ENSSBOG00000030500	-	99	54.191	ENSMODG00000005341	APEX2	99	54.191	Monodelphis_domestica
ENSSBOG00000030500	-	99	42.953	ENSMALG00000014179	apex2	99	42.230	Monopterus_albus
ENSSBOG00000030500	-	100	78.764	MGP_CAROLIEiJ_G0033484	Apex2	100	80.377	Mus_caroli
ENSSBOG00000030500	-	100	78.571	ENSMUSG00000025269	Apex2	99	80.377	Mus_musculus
ENSSBOG00000030500	-	100	78.958	MGP_PahariEiJ_G0032023	Apex2	94	88.263	Mus_pahari
ENSSBOG00000030500	-	100	78.958	MGP_SPRETEiJ_G0034654	Apex2	100	80.377	Mus_spretus
ENSSBOG00000030500	-	100	84.749	ENSMPUG00000003293	APEX2	100	84.749	Mustela_putorius_furo
ENSSBOG00000030500	-	100	79.730	ENSMLUG00000016298	-	100	79.730	Myotis_lucifugus
ENSSBOG00000030500	-	100	77.606	ENSMLUG00000004562	-	100	77.606	Myotis_lucifugus
ENSSBOG00000030500	-	100	79.151	ENSNGAG00000013576	Apex2	100	79.151	Nannospalax_galili
ENSSBOG00000030500	-	99	44.387	ENSNBRG00000010099	apex2	99	43.531	Neolamprologus_brichardi
ENSSBOG00000030500	-	80	97.233	ENSNLEG00000032067	-	99	97.233	Nomascus_leucogenys
ENSSBOG00000030500	-	99	48.134	ENSONIG00000016881	apex2	99	47.280	Oreochromis_niloticus
ENSSBOG00000030500	-	89	52.130	ENSOANG00000000689	-	95	52.130	Ornithorhynchus_anatinus
ENSSBOG00000030500	-	100	72.031	ENSOCUG00000000570	APEX2	100	72.031	Oryctolagus_cuniculus
ENSSBOG00000030500	-	99	45.811	ENSORLG00000014053	apex2	99	45.633	Oryzias_latipes
ENSSBOG00000030500	-	99	45.276	ENSORLG00020013253	apex2	99	45.098	Oryzias_latipes_hni
ENSSBOG00000030500	-	99	45.633	ENSORLG00015007515	apex2	99	45.455	Oryzias_latipes_hsok
ENSSBOG00000030500	-	99	44.760	ENSOMEG00000003655	apex2	99	44.760	Oryzias_melastigma
ENSSBOG00000030500	-	99	86.187	ENSOGAG00000007797	APEX2	99	86.187	Otolemur_garnettii
ENSSBOG00000030500	-	100	84.170	ENSOARG00000005742	APEX2	100	83.398	Ovis_aries
ENSSBOG00000030500	-	100	94.595	ENSPPAG00000035747	APEX2	100	94.595	Pan_paniscus
ENSSBOG00000030500	-	100	85.135	ENSPPRG00000002440	APEX2	100	85.135	Panthera_pardus
ENSSBOG00000030500	-	100	84.749	ENSPTIG00000021651	APEX2	100	84.749	Panthera_tigris_altaica
ENSSBOG00000030500	-	100	94.788	ENSPTRG00000021946	APEX2	100	94.788	Pan_troglodytes
ENSSBOG00000030500	-	100	94.208	ENSPANG00000003595	APEX2	100	94.208	Papio_anubis
ENSSBOG00000030500	-	99	46.585	ENSPKIG00000007752	apex2	99	46.046	Paramormyrops_kingsleyae
ENSSBOG00000030500	-	99	44.071	ENSPMGG00000009151	apex2	99	43.894	Periophthalmus_magnuspinnatus
ENSSBOG00000030500	-	100	79.537	ENSPEMG00000016475	Apex2	100	79.537	Peromyscus_maniculatus_bairdii
ENSSBOG00000030500	-	99	54.757	ENSPCIG00000007633	APEX2	98	54.757	Phascolarctos_cinereus
ENSSBOG00000030500	-	99	45.534	ENSPFOG00000000408	apex2	99	44.677	Poecilia_formosa
ENSSBOG00000030500	-	99	45.359	ENSPLAG00000023814	apex2	99	44.503	Poecilia_latipinna
ENSSBOG00000030500	-	99	45.899	ENSPMEG00000023222	apex2	99	44.852	Poecilia_mexicana
ENSSBOG00000030500	-	100	94.402	ENSPPYG00000020388	APEX2	100	94.402	Pongo_abelii
ENSSBOG00000030500	-	100	87.066	ENSPCOG00000016083	APEX2	100	87.066	Propithecus_coquereli
ENSSBOG00000030500	-	90	84.301	ENSPVAG00000007851	APEX2	100	84.301	Pteropus_vampyrus
ENSSBOG00000030500	-	99	43.805	ENSPNYG00000015698	apex2	99	43.684	Pundamilia_nyererei
ENSSBOG00000030500	-	99	44.857	ENSPNAG00000011666	apex2	99	44.688	Pygocentrus_nattereri
ENSSBOG00000030500	-	100	78.958	ENSRNOG00000000166	Apex2	100	78.378	Rattus_norvegicus
ENSSBOG00000030500	-	100	94.402	ENSRBIG00000036500	APEX2	100	94.402	Rhinopithecus_bieti
ENSSBOG00000030500	-	100	94.402	ENSRROG00000032674	APEX2	100	94.402	Rhinopithecus_roxellana
ENSSBOG00000030500	-	99	54.386	ENSSHAG00000007846	APEX2	99	53.996	Sarcophilus_harrisii
ENSSBOG00000030500	-	99	48.995	ENSSFOG00015010354	apex2	99	48.995	Scleropages_formosus
ENSSBOG00000030500	-	99	44.834	ENSSMAG00000012753	apex2	99	44.658	Scophthalmus_maximus
ENSSBOG00000030500	-	99	46.018	ENSSDUG00000022892	apex2	99	45.293	Seriola_dumerili
ENSSBOG00000030500	-	99	45.902	ENSSLDG00000024347	apex2	99	45.818	Seriola_lalandi_dorsalis
ENSSBOG00000030500	-	100	77.543	ENSSARG00000010297	APEX2	100	77.543	Sorex_araneus
ENSSBOG00000030500	-	99	46.422	ENSSPAG00000016279	apex2	99	46.597	Stegastes_partitus
ENSSBOG00000030500	-	100	83.977	ENSSSCG00000012348	-	100	83.977	Sus_scrofa
ENSSBOG00000030500	-	99	46.032	ENSTRUG00000015660	apex2	99	46.032	Takifugu_rubripes
ENSSBOG00000030500	-	81	47.031	ENSTNIG00000003725	apex2	100	46.556	Tetraodon_nigroviridis
ENSSBOG00000030500	-	90	83.871	ENSTBEG00000010520	APEX2	100	83.871	Tupaia_belangeri
ENSSBOG00000030500	-	100	86.100	ENSUAMG00000004720	APEX2	100	86.100	Ursus_americanus
ENSSBOG00000030500	-	100	81.467	ENSUMAG00000002892	APEX2	100	81.467	Ursus_maritimus
ENSSBOG00000030500	-	100	85.521	ENSVVUG00000005989	APEX2	100	85.521	Vulpes_vulpes
ENSSBOG00000030500	-	99	46.617	ENSXETG00000022026	apex2	98	46.617	Xenopus_tropicalis
ENSSBOG00000030500	-	99	45.534	ENSXMAG00000025740	apex2	99	44.658	Xiphophorus_maculatus