EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030573 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 22090 bases
Position: chrJH378170.1:3445624-3467713
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000028600	CSD	PF00313.22	6.2e-26	1	1
ENSSBOP00000028655	CSD	PF00313.22	6.3e-26	1	1
ENSSBOP00000028636	CSD	PF00313.22	6.5e-26	1	1
ENSSBOP00000028652	CSD	PF00313.22	7.2e-26	1	1
ENSSBOP00000028646	CSD	PF00313.22	7.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000045532	YBX3-204	1107	-	ENSSBOP00000028652	368 (aa)	-	A0A2K6U9R3
ENSSBOT00000045526	YBX3-203	1143	XM_010345144	ENSSBOP00000028646	380 (aa)	XP_010343446	A0A2K6U9R5
ENSSBOT00000045480	YBX3-201	1023	-	ENSSBOP00000028600	340 (aa)	-	A0A2K6U9Q2
ENSSBOT00000045535	YBX3-205	900	-	ENSSBOP00000028655	299 (aa)	-	A0A2K6U9U6
ENSSBOT00000045516	YBX3-202	1038	-	ENSSBOP00000028636	345 (aa)	-	A0A2K6U9Q9

Gene Model

Click here to download ENSSBOG00000030573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030573	YBX3	86	50.316	ENSSBOG00000028808	-	86	51.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030573	YBX3	87	95.593	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSSBOG00000030573	YBX3	83	94.056	ENSAMEG00000009393	YBX3	99	81.356	Ailuropoda_melanoleuca
ENSSBOG00000030573	YBX3	72	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSSBOG00000030573	YBX3	74	69.737	ENSANAG00000033366	-	83	89.231	Aotus_nancymaae
ENSSBOG00000030573	YBX3	87	96.610	ENSANAG00000024492	-	98	93.204	Aotus_nancymaae
ENSSBOG00000030573	YBX3	99	79.646	ENSBTAG00000009663	YBX3	92	76.923	Bos_taurus
ENSSBOG00000030573	YBX3	86	96.907	ENSCJAG00000021660	-	93	87.755	Callithrix_jacchus
ENSSBOG00000030573	YBX3	67	96.203	ENSCJAG00000033824	-	83	95.890	Callithrix_jacchus
ENSSBOG00000030573	YBX3	85	92.708	ENSCAFG00000013401	YBX3	99	96.279	Canis_familiaris
ENSSBOG00000030573	YBX3	86	88.660	ENSCAFG00020006412	YBX3	85	92.793	Canis_lupus_dingo
ENSSBOG00000030573	YBX3	99	79.646	ENSCHIG00000010863	YBX3	96	79.769	Capra_hircus
ENSSBOG00000030573	YBX3	74	82.353	ENSTSYG00000035821	-	69	96.512	Carlito_syrichta
ENSSBOG00000030573	YBX3	86	93.902	ENSTSYG00000004204	-	100	93.902	Carlito_syrichta
ENSSBOG00000030573	YBX3	85	89.078	ENSCAPG00000015039	YBX3	95	89.078	Cavia_aperea
ENSSBOG00000030573	YBX3	83	89.161	ENSCPOG00000011329	YBX3	89	86.379	Cavia_porcellus
ENSSBOG00000030573	YBX3	86	97.595	ENSCCAG00000016469	YBX3	93	88.116	Cebus_capucinus
ENSSBOG00000030573	YBX3	87	95.254	ENSCATG00000034411	YBX3	92	87.172	Cercocebus_atys
ENSSBOG00000030573	YBX3	86	88.889	ENSCLAG00000016030	YBX3	97	88.889	Chinchilla_lanigera
ENSSBOG00000030573	YBX3	87	95.593	ENSCSAG00000008744	YBX3	92	87.464	Chlorocebus_sabaeus
ENSSBOG00000030573	YBX3	85	78.276	ENSCPBG00000014147	YBX3	97	70.690	Chrysemys_picta_bellii
ENSSBOG00000030573	YBX3	87	95.593	ENSCANG00000036801	YBX3	99	91.401	Colobus_angolensis_palliatus
ENSSBOG00000030573	YBX3	87	89.527	ENSCGRG00001016148	Ybx3	100	77.898	Cricetulus_griseus_chok1gshd
ENSSBOG00000030573	YBX3	85	90.572	ENSCGRG00000004563	Ybx3	100	90.572	Cricetulus_griseus_crigri
ENSSBOG00000030573	YBX3	84	91.228	ENSDORG00000009103	Ybx3	83	92.517	Dipodomys_ordii
ENSSBOG00000030573	YBX3	84	85.315	ENSETEG00000002557	YBX3	99	84.155	Echinops_telfairi
ENSSBOG00000030573	YBX3	86	85.223	ENSEASG00005014726	YBX3	96	75.910	Equus_asinus_asinus
ENSSBOG00000030573	YBX3	86	89.003	ENSECAG00000013777	YBX3	82	94.595	Equus_caballus
ENSSBOG00000030573	YBX3	84	92.606	ENSEEUG00000010415	YBX3	100	92.606	Erinaceus_europaeus
ENSSBOG00000030573	YBX3	86	93.471	ENSFCAG00000027748	YBX3	92	84.503	Felis_catus
ENSSBOG00000030573	YBX3	72	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSSBOG00000030573	YBX3	92	80.818	ENSFDAG00000021192	YBX3	95	85.085	Fukomys_damarensis
ENSSBOG00000030573	YBX3	73	82.192	ENSGALG00000031890	YBX3	69	98.864	Gallus_gallus
ENSSBOG00000030573	YBX3	83	79.791	ENSGAGG00000017780	YBX3	96	70.201	Gopherus_agassizii
ENSSBOG00000030573	YBX3	87	95.593	ENSGGOG00000001352	YBX3	92	87.464	Gorilla_gorilla
ENSSBOG00000030573	YBX3	79	76.753	ENSHGLG00000015495	-	79	75.000	Heterocephalus_glaber_female
ENSSBOG00000030573	YBX3	85	75.085	ENSHGLG00000014798	-	97	70.871	Heterocephalus_glaber_female
ENSSBOG00000030573	YBX3	81	85.597	ENSHGLG00100003589	YBX3	97	81.070	Heterocephalus_glaber_male
ENSSBOG00000030573	YBX3	87	87.458	ENSSTOG00000032577	-	89	82.857	Ictidomys_tridecemlineatus
ENSSBOG00000030573	YBX3	86	86.780	ENSSTOG00000002108	-	94	84.641	Ictidomys_tridecemlineatus
ENSSBOG00000030573	YBX3	86	67.577	ENSJJAG00000014239	Ybx3	92	83.750	Jaculus_jaculus
ENSSBOG00000030573	YBX3	87	91.864	ENSLAFG00000017247	YBX3	93	82.749	Loxodonta_africana
ENSSBOG00000030573	YBX3	87	95.254	ENSMFAG00000039369	YBX3	92	87.172	Macaca_fascicularis
ENSSBOG00000030573	YBX3	87	95.254	ENSMMUG00000022469	YBX3	98	90.881	Macaca_mulatta
ENSSBOG00000030573	YBX3	87	95.254	ENSMNEG00000045109	YBX3	92	87.172	Macaca_nemestrina
ENSSBOG00000030573	YBX3	100	92.754	ENSMLEG00000033618	YBX3	100	88.366	Mandrillus_leucophaeus
ENSSBOG00000030573	YBX3	70	98.077	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSSBOG00000030573	YBX3	97	82.371	ENSMAUG00000012185	Ybx3	90	91.349	Mesocricetus_auratus
ENSSBOG00000030573	YBX3	83	95.455	ENSMICG00000038002	-	88	87.156	Microcebus_murinus
ENSSBOG00000030573	YBX3	81	78.889	ENSMICG00000031459	-	77	77.727	Microcebus_murinus
ENSSBOG00000030573	YBX3	87	89.527	ENSMOCG00000016291	Ybx3	93	92.727	Microtus_ochrogaster
ENSSBOG00000030573	YBX3	85	84.014	ENSMODG00000018248	YBX3	93	84.014	Monodelphis_domestica
ENSSBOG00000030573	YBX3	86	90.034	MGP_CAROLIEiJ_G0028947	Ybx3	100	77.628	Mus_caroli
ENSSBOG00000030573	YBX3	86	90.034	ENSMUSG00000030189	Ybx3	100	77.628	Mus_musculus
ENSSBOG00000030573	YBX3	86	90.722	MGP_PahariEiJ_G0022709	Ybx3	100	78.167	Mus_pahari
ENSSBOG00000030573	YBX3	86	90.378	MGP_SPRETEiJ_G0029994	Ybx3	100	77.898	Mus_spretus
ENSSBOG00000030573	YBX3	86	76.589	ENSMPUG00000011810	YBX3	100	62.341	Mustela_putorius_furo
ENSSBOG00000030573	YBX3	78	93.309	ENSMLUG00000007476	YBX3	100	91.450	Myotis_lucifugus
ENSSBOG00000030573	YBX3	82	88.380	ENSNGAG00000000710	Ybx3	94	83.983	Nannospalax_galili
ENSSBOG00000030573	YBX3	87	91.864	ENSNLEG00000034844	YBX3	97	84.071	Nomascus_leucogenys
ENSSBOG00000030573	YBX3	51	75.723	ENSMEUG00000002507	-	81	75.723	Notamacropus_eugenii
ENSSBOG00000030573	YBX3	83	84.266	ENSODEG00000017957	YBX3	97	74.242	Octodon_degus
ENSSBOG00000030573	YBX3	83	88.462	ENSOCUG00000001889	YBX3	84	87.889	Oryctolagus_cuniculus
ENSSBOG00000030573	YBX3	86	89.933	ENSOGAG00000013245	YBX3	96	80.441	Otolemur_garnettii
ENSSBOG00000030573	YBX3	83	84.028	ENSOARG00000020919	YBX3	98	83.505	Ovis_aries
ENSSBOG00000030573	YBX3	86	96.564	ENSPPAG00000039068	YBX3	84	94.667	Pan_paniscus
ENSSBOG00000030573	YBX3	86	93.127	ENSPPRG00000005859	YBX3	92	84.211	Panthera_pardus
ENSSBOG00000030573	YBX3	84	92.982	ENSPTIG00000005322	YBX3	83	94.558	Panthera_tigris_altaica
ENSSBOG00000030573	YBX3	87	95.593	ENSPTRG00000004681	YBX3	92	87.464	Pan_troglodytes
ENSSBOG00000030573	YBX3	87	95.254	ENSPANG00000010280	YBX3	92	87.172	Papio_anubis
ENSSBOG00000030573	YBX3	62	99.038	ENSPSIG00000009247	YBX3	92	100.000	Pelodiscus_sinensis
ENSSBOG00000030573	YBX3	87	89.189	ENSPEMG00000012132	-	91	92.042	Peromyscus_maniculatus_bairdii
ENSSBOG00000030573	YBX3	74	92.727	ENSPEMG00000010391	-	83	92.727	Peromyscus_maniculatus_bairdii
ENSSBOG00000030573	YBX3	76	80.385	ENSPCIG00000029949	YBX3	100	80.695	Phascolarctos_cinereus
ENSSBOG00000030573	YBX3	87	95.254	ENSPPYG00000004279	YBX3	92	87.172	Pongo_abelii
ENSSBOG00000030573	YBX3	62	91.469	ENSPCAG00000001397	YBX3	88	79.921	Procavia_capensis
ENSSBOG00000030573	YBX3	51	89.714	ENSPCOG00000011663	YBX3	95	72.314	Propithecus_coquereli
ENSSBOG00000030573	YBX3	93	72.240	ENSPVAG00000006740	YBX3	72	77.574	Pteropus_vampyrus
ENSSBOG00000030573	YBX3	87	89.865	ENSRNOG00000005480	Ybx3	100	78.437	Rattus_norvegicus
ENSSBOG00000030573	YBX3	86	96.564	ENSRBIG00000039208	YBX3	92	87.464	Rhinopithecus_bieti
ENSSBOG00000030573	YBX3	87	95.593	ENSRROG00000029638	YBX3	92	87.464	Rhinopithecus_roxellana
ENSSBOG00000030573	YBX3	66	98.837	ENSSHAG00000003262	YBX3	98	80.756	Sarcophilus_harrisii
ENSSBOG00000030573	YBX3	85	93.080	ENSSSCG00000000633	YBX3	91	83.768	Sus_scrofa
ENSSBOG00000030573	YBX3	71	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSSBOG00000030573	YBX3	93	88.959	ENSTBEG00000012570	YBX3	87	88.959	Tupaia_belangeri
ENSSBOG00000030573	YBX3	77	84.962	ENSTTRG00000008045	YBX3	100	84.962	Tursiops_truncatus
ENSSBOG00000030573	YBX3	80	90.614	ENSUAMG00000016662	YBX3	100	90.614	Ursus_americanus
ENSSBOG00000030573	YBX3	82	94.014	ENSUMAG00000016118	YBX3	98	93.919	Ursus_maritimus
ENSSBOG00000030573	YBX3	58	100.000	ENSVPAG00000000876	YBX3	100	72.535	Vicugna_pacos
ENSSBOG00000030573	YBX3	80	91.336	ENSVVUG00000004956	YBX3	100	91.336	Vulpes_vulpes
ENSSBOG00000030573	YBX3	56	92.045	ENSXETG00000016239	ybx3	89	68.919	Xenopus_tropicalis