EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000030666 (Gene tree)
Gene ID: 101049004
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 9307 bases
Position: chrJH378197.1:6351575-6360881
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000028608	RRM_1	PF00076.22	6.6e-18	1	1
ENSSBOP00000028598	RRM_1	PF00076.22	7.3e-18	1	1
ENSSBOP00000028593	RRM_1	PF00076.22	7.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000045490	RBM42-204	1023	-	ENSSBOP00000028610	340 (aa)	-	A0A2K6U9R0
ENSSBOT00000045488	RBM42-203	1143	-	ENSSBOP00000028608	380 (aa)	-	A0A2K6U9P3
ENSSBOT00000045472	RBM42-201	1791	-	ENSSBOP00000028593	431 (aa)	-	A0A2K6U9M8
ENSSBOT00000045478	RBM42-202	1716	XM_003937367	ENSSBOP00000028598	406 (aa)	XP_003937416	A0A2K6U9N3

Gene Model

Click here to download ENSSBOG00000030666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030666	RBM42	100	99.754	ENSG00000126254	RBM42	90	98.956	Homo_sapiens
ENSSBOG00000030666	RBM42	100	98.529	ENSAMEG00000000524	RBM42	85	98.529	Ailuropoda_melanoleuca
ENSSBOG00000030666	RBM42	100	99.261	ENSANAG00000027537	RBM42	90	99.211	Aotus_nancymaae
ENSSBOG00000030666	RBM42	100	98.522	ENSBTAG00000013440	RBM42	85	98.522	Bos_taurus
ENSSBOG00000030666	RBM42	100	99.737	ENSCJAG00000010220	RBM42	90	99.737	Callithrix_jacchus
ENSSBOG00000030666	RBM42	100	91.379	ENSCAFG00020018628	RBM42	85	91.379	Canis_lupus_dingo
ENSSBOG00000030666	RBM42	100	98.030	ENSCHIG00000009518	RBM42	85	98.030	Capra_hircus
ENSSBOG00000030666	RBM42	100	98.526	ENSTSYG00000014688	RBM42	90	98.163	Carlito_syrichta
ENSSBOG00000030666	RBM42	95	98.187	ENSCAPG00000009566	RBM42	99	98.187	Cavia_aperea
ENSSBOG00000030666	RBM42	100	98.276	ENSCPOG00000012365	RBM42	84	98.276	Cavia_porcellus
ENSSBOG00000030666	RBM42	100	99.754	ENSCCAG00000034440	RBM42	90	99.737	Cebus_capucinus
ENSSBOG00000030666	RBM42	100	99.507	ENSCATG00000041924	RBM42	90	98.695	Cercocebus_atys
ENSSBOG00000030666	RBM42	100	97.783	ENSCLAG00000012865	RBM42	84	97.783	Chinchilla_lanigera
ENSSBOG00000030666	RBM42	100	92.647	ENSCSAG00000004422	RBM42	90	92.647	Chlorocebus_sabaeus
ENSSBOG00000030666	RBM42	95	98.964	ENSCANG00000030272	RBM42	99	90.617	Colobus_angolensis_palliatus
ENSSBOG00000030666	RBM42	100	98.522	ENSCGRG00001018540	Rbm42	85	98.522	Cricetulus_griseus_chok1gshd
ENSSBOG00000030666	RBM42	100	98.044	ENSDNOG00000037397	RBM42	85	98.044	Dasypus_novemcinctus
ENSSBOG00000030666	RBM42	100	98.522	ENSDORG00000013001	Rbm42	85	98.522	Dipodomys_ordii
ENSSBOG00000030666	RBM42	71	80.370	ENSETEG00000007878	RBM42	59	77.407	Echinops_telfairi
ENSSBOG00000030666	RBM42	100	92.118	ENSEASG00005001074	RBM42	90	92.099	Equus_asinus_asinus
ENSSBOG00000030666	RBM42	100	92.118	ENSECAG00000018215	RBM42	90	92.099	Equus_caballus
ENSSBOG00000030666	RBM42	100	98.768	ENSFCAG00000006376	RBM42	90	98.421	Felis_catus
ENSSBOG00000030666	RBM42	100	97.059	ENSFDAG00000007440	RBM42	85	97.059	Fukomys_damarensis
ENSSBOG00000030666	RBM42	100	99.754	ENSGGOG00000009972	RBM42	90	98.956	Gorilla_gorilla
ENSSBOG00000030666	RBM42	100	96.798	ENSHGLG00000008418	RBM42	85	96.798	Heterocephalus_glaber_female
ENSSBOG00000030666	RBM42	100	96.798	ENSHGLG00100018667	RBM42	85	96.798	Heterocephalus_glaber_male
ENSSBOG00000030666	RBM42	100	97.291	ENSSTOG00000013050	RBM42	90	92.840	Ictidomys_tridecemlineatus
ENSSBOG00000030666	RBM42	100	98.030	ENSJJAG00000010421	Rbm42	85	98.030	Jaculus_jaculus
ENSSBOG00000030666	RBM42	100	95.813	ENSLAFG00000014993	RBM42	85	95.813	Loxodonta_africana
ENSSBOG00000030666	RBM42	100	99.507	ENSMFAG00000002758	RBM42	90	98.695	Macaca_fascicularis
ENSSBOG00000030666	RBM42	100	99.507	ENSMMUG00000018954	RBM42	85	99.507	Macaca_mulatta
ENSSBOG00000030666	RBM42	100	99.507	ENSMNEG00000030009	RBM42	90	98.695	Macaca_nemestrina
ENSSBOG00000030666	RBM42	100	99.507	ENSMLEG00000036119	RBM42	85	99.507	Mandrillus_leucophaeus
ENSSBOG00000030666	RBM42	100	99.261	ENSMICG00000009880	RBM42	90	98.947	Microcebus_murinus
ENSSBOG00000030666	RBM42	100	98.030	ENSMOCG00000000405	Rbm42	85	98.030	Microtus_ochrogaster
ENSSBOG00000030666	RBM42	100	98.522	MGP_CAROLIEiJ_G0029536	Rbm42	85	98.522	Mus_caroli
ENSSBOG00000030666	RBM42	100	98.522	ENSMUSG00000036733	Rbm42	85	98.522	Mus_musculus
ENSSBOG00000030666	RBM42	100	98.522	MGP_PahariEiJ_G0012770	Rbm42	85	98.522	Mus_pahari
ENSSBOG00000030666	RBM42	100	98.522	MGP_SPRETEiJ_G0030632	Rbm42	85	98.522	Mus_spretus
ENSSBOG00000030666	RBM42	100	92.593	ENSMPUG00000006288	RBM42	90	92.593	Mustela_putorius_furo
ENSSBOG00000030666	RBM42	100	97.783	ENSMLUG00000011334	RBM42	85	97.783	Myotis_lucifugus
ENSSBOG00000030666	RBM42	100	99.015	ENSNGAG00000019698	Rbm42	85	99.015	Nannospalax_galili
ENSSBOG00000030666	RBM42	83	99.162	ENSNLEG00000011272	-	94	99.162	Nomascus_leucogenys
ENSSBOG00000030666	RBM42	99	84.597	ENSMEUG00000016300	RBM42	87	85.507	Notamacropus_eugenii
ENSSBOG00000030666	RBM42	100	94.828	ENSOPRG00000001229	RBM42	85	92.118	Ochotona_princeps
ENSSBOG00000030666	RBM42	100	97.783	ENSODEG00000013705	RBM42	84	97.783	Octodon_degus
ENSSBOG00000030666	RBM42	100	91.379	ENSOCUG00000003337	RBM42	90	91.176	Oryctolagus_cuniculus
ENSSBOG00000030666	RBM42	100	98.030	ENSOGAG00000004144	RBM42	85	98.030	Otolemur_garnettii
ENSSBOG00000030666	RBM42	99	88.642	ENSOARG00000004926	RBM42	83	92.099	Ovis_aries
ENSSBOG00000030666	RBM42	100	99.754	ENSPPAG00000037315	RBM42	90	99.737	Pan_paniscus
ENSSBOG00000030666	RBM42	100	98.768	ENSPPRG00000016784	RBM42	90	98.421	Panthera_pardus
ENSSBOG00000030666	RBM42	100	98.276	ENSPTIG00000019270	RBM42	90	97.895	Panthera_tigris_altaica
ENSSBOG00000030666	RBM42	100	99.754	ENSPTRG00000010852	RBM42	90	98.956	Pan_troglodytes
ENSSBOG00000030666	RBM42	100	98.695	ENSPANG00000017032	RBM42	90	98.695	Papio_anubis
ENSSBOG00000030666	RBM42	100	99.261	ENSPEMG00000012065	Rbm42	85	99.261	Peromyscus_maniculatus_bairdii
ENSSBOG00000030666	RBM42	100	99.265	ENSPPYG00000009871	RBM42	84	99.265	Pongo_abelii
ENSSBOG00000030666	RBM42	93	96.053	ENSPCAG00000013053	RBM42	79	89.583	Procavia_capensis
ENSSBOG00000030666	RBM42	100	99.261	ENSPCOG00000026433	-	90	98.947	Propithecus_coquereli
ENSSBOG00000030666	RBM42	82	99.099	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSSBOG00000030666	RBM42	100	98.276	ENSPVAG00000012815	RBM42	85	98.276	Pteropus_vampyrus
ENSSBOG00000030666	RBM42	100	98.768	ENSRNOG00000024278	Rbm42	85	98.768	Rattus_norvegicus
ENSSBOG00000030666	RBM42	100	99.507	ENSRBIG00000007566	RBM42	90	98.695	Rhinopithecus_bieti
ENSSBOG00000030666	RBM42	100	99.507	ENSRROG00000042313	RBM42	90	99.474	Rhinopithecus_roxellana
ENSSBOG00000030666	RBM42	95	97.927	ENSSARG00000010724	RBM42	80	97.927	Sorex_araneus
ENSSBOG00000030666	RBM42	100	98.522	ENSSSCG00000002905	RBM42	90	98.421	Sus_scrofa
ENSSBOG00000030666	RBM42	100	98.768	ENSUAMG00000020711	RBM42	85	98.768	Ursus_americanus
ENSSBOG00000030666	RBM42	100	98.768	ENSUMAG00000020223	RBM42	85	98.768	Ursus_maritimus
ENSSBOG00000030666	RBM42	100	97.537	ENSVVUG00000015117	RBM42	91	92.840	Vulpes_vulpes