EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030886 (Gene tree)
Gene ID: 101039921
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 19219 bases
Position: chrJH378138.1:2965923-2985141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000029127	RRM_1	PF00076.22	5.6e-18	1	1
ENSSBOP00000029127	RRM_3	PF08777.11	7.6e-30	1	1
ENSSBOP00000029127	La	PF05383.17	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000046008	-	2282	XM_010340066	ENSSBOP00000029127	583 (aa)	XP_010338368	A0A2K6UB33

Gene Model

Click here to download ENSSBOG00000030886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030886	-	95	74.054	ENSSBOG00000022652	-	95	73.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030886	-	100	95.197	ENSG00000174720	LARP7	100	98.450	Homo_sapiens
ENSSBOG00000030886	-	97	55.594	ENSAPOG00000014570	larp7	95	55.009	Acanthochromis_polyacanthus
ENSSBOG00000030886	-	100	89.022	ENSAMEG00000015642	LARP7	100	89.022	Ailuropoda_melanoleuca
ENSSBOG00000030886	-	96	54.707	ENSACIG00000023850	larp7	95	51.950	Amphilophus_citrinellus
ENSSBOG00000030886	-	95	55.360	ENSAOCG00000016160	larp7	95	55.536	Amphiprion_ocellaris
ENSSBOG00000030886	-	95	55.185	ENSAPEG00000021823	larp7	95	55.654	Amphiprion_percula
ENSSBOG00000030886	-	97	56.089	ENSATEG00000016238	larp7	95	56.316	Anabas_testudineus
ENSSBOG00000030886	-	99	71.570	ENSAPLG00000012887	LARP7	95	71.626	Anas_platyrhynchos
ENSSBOG00000030886	-	99	69.631	ENSACAG00000010662	LARP7	91	69.894	Anolis_carolinensis
ENSSBOG00000030886	-	100	95.369	ENSANAG00000031139	-	100	95.369	Aotus_nancymaae
ENSSBOG00000030886	-	100	79.760	ENSANAG00000022318	-	100	79.760	Aotus_nancymaae
ENSSBOG00000030886	-	96	55.497	ENSACLG00000023184	larp7	95	54.417	Astatotilapia_calliptera
ENSSBOG00000030886	-	99	53.925	ENSAMXG00000002549	larp7	95	54.594	Astyanax_mexicanus
ENSSBOG00000030886	-	100	84.734	ENSBTAG00000009632	LARP7	97	84.391	Bos_taurus
ENSSBOG00000030886	-	100	96.741	ENSCJAG00000003711	LARP7	100	96.741	Callithrix_jacchus
ENSSBOG00000030886	-	100	86.667	ENSCAFG00000011715	LARP7	100	86.325	Canis_familiaris
ENSSBOG00000030886	-	100	87.307	ENSCAFG00020017225	LARP7	100	86.964	Canis_lupus_dingo
ENSSBOG00000030886	-	100	85.103	ENSCHIG00000014163	-	100	84.760	Capra_hircus
ENSSBOG00000030886	-	100	70.719	ENSCHIG00000013971	-	100	73.737	Capra_hircus
ENSSBOG00000030886	-	95	79.099	ENSTSYG00000035188	-	98	79.099	Carlito_syrichta
ENSSBOG00000030886	-	94	88.300	ENSTSYG00000006769	-	100	88.665	Carlito_syrichta
ENSSBOG00000030886	-	95	73.921	ENSCAPG00000009328	LARP7	96	73.741	Cavia_aperea
ENSSBOG00000030886	-	95	83.273	ENSCPOG00000011830	LARP7	96	83.273	Cavia_porcellus
ENSSBOG00000030886	-	95	86.643	ENSCCAG00000023563	-	98	86.643	Cebus_capucinus
ENSSBOG00000030886	-	100	97.942	ENSCCAG00000026787	-	100	97.942	Cebus_capucinus
ENSSBOG00000030886	-	100	94.511	ENSCATG00000043535	LARP7	100	94.511	Cercocebus_atys
ENSSBOG00000030886	-	95	85.612	ENSCLAG00000005894	LARP7	96	85.612	Chinchilla_lanigera
ENSSBOG00000030886	-	100	94.340	ENSCSAG00000003810	LARP7	100	94.340	Chlorocebus_sabaeus
ENSSBOG00000030886	-	93	75.461	ENSCHOG00000008967	-	100	75.461	Choloepus_hoffmanni
ENSSBOG00000030886	-	100	84.418	ENSCHOG00000002379	-	100	84.589	Choloepus_hoffmanni
ENSSBOG00000030886	-	100	72.833	ENSCPBG00000004919	LARP7	97	73.124	Chrysemys_picta_bellii
ENSSBOG00000030886	-	72	36.364	ENSCING00000021685	-	75	36.420	Ciona_intestinalis
ENSSBOG00000030886	-	100	95.034	ENSCANG00000031482	LARP7	99	95.034	Colobus_angolensis_palliatus
ENSSBOG00000030886	-	90	71.917	ENSCGRG00001012747	-	95	73.559	Cricetulus_griseus_chok1gshd
ENSSBOG00000030886	-	99	82.333	ENSCGRG00001025050	-	96	83.721	Cricetulus_griseus_chok1gshd
ENSSBOG00000030886	-	95	73.477	ENSCGRG00000007642	-	95	75.094	Cricetulus_griseus_crigri
ENSSBOG00000030886	-	95	75.404	ENSCGRG00000001141	-	96	76.360	Cricetulus_griseus_crigri
ENSSBOG00000030886	-	97	54.188	ENSCSEG00000009088	larp7	95	54.035	Cynoglossus_semilaevis
ENSSBOG00000030886	-	96	55.692	ENSCVAG00000016852	larp7	80	73.224	Cyprinodon_variegatus
ENSSBOG00000030886	-	96	55.142	ENSDARG00000017315	larp7	94	53.846	Danio_rerio
ENSSBOG00000030886	-	100	84.642	ENSDNOG00000013761	LARP7	100	84.300	Dasypus_novemcinctus
ENSSBOG00000030886	-	95	87.050	ENSDORG00000008896	-	96	87.050	Dipodomys_ordii
ENSSBOG00000030886	-	100	81.990	ENSETEG00000011692	LARP7	100	82.161	Echinops_telfairi
ENSSBOG00000030886	-	100	87.671	ENSEASG00005005592	LARP7	100	87.671	Equus_asinus_asinus
ENSSBOG00000030886	-	100	88.185	ENSECAG00000000834	LARP7	100	88.185	Equus_caballus
ENSSBOG00000030886	-	96	83.662	ENSEEUG00000012824	LARP7	100	83.303	Erinaceus_europaeus
ENSSBOG00000030886	-	95	54.577	ENSELUG00000015341	larp7	95	55.009	Esox_lucius
ENSSBOG00000030886	-	100	87.842	ENSFCAG00000031966	LARP7	100	87.842	Felis_catus
ENSSBOG00000030886	-	99	72.651	ENSFALG00000000972	LARP7	97	72.483	Ficedula_albicollis
ENSSBOG00000030886	-	95	85.971	ENSFDAG00000014048	-	96	85.971	Fukomys_damarensis
ENSSBOG00000030886	-	95	78.815	ENSFDAG00000011855	-	96	79.354	Fukomys_damarensis
ENSSBOG00000030886	-	97	54.310	ENSFHEG00000021652	larp7	95	54.306	Fundulus_heteroclitus
ENSSBOG00000030886	-	99	71.237	ENSGALG00000012048	LARP7	99	71.572	Gallus_gallus
ENSSBOG00000030886	-	99	54.040	ENSGAFG00000015400	larp7	95	53.779	Gambusia_affinis
ENSSBOG00000030886	-	99	52.318	ENSGACG00000019618	larp7	80	70.492	Gasterosteus_aculeatus
ENSSBOG00000030886	-	98	73.266	ENSGAGG00000024520	LARP7	95	72.949	Gopherus_agassizii
ENSSBOG00000030886	-	100	95.197	ENSGGOG00000023567	-	100	95.197	Gorilla_gorilla
ENSSBOG00000030886	-	87	92.885	ENSGGOG00000006438	-	97	92.885	Gorilla_gorilla
ENSSBOG00000030886	-	96	55.672	ENSHBUG00000019223	larp7	95	54.594	Haplochromis_burtoni
ENSSBOG00000030886	-	95	85.996	ENSHGLG00000002716	LARP7	96	85.996	Heterocephalus_glaber_female
ENSSBOG00000030886	-	95	85.996	ENSHGLG00100000332	LARP7	96	85.996	Heterocephalus_glaber_male
ENSSBOG00000030886	-	96	53.590	ENSHCOG00000000664	LARP7	96	54.078	Hippocampus_comes
ENSSBOG00000030886	-	97	54.329	ENSIPUG00000019886	larp7	95	53.750	Ictalurus_punctatus
ENSSBOG00000030886	-	100	88.851	ENSSTOG00000011789	LARP7	100	88.508	Ictidomys_tridecemlineatus
ENSSBOG00000030886	-	99	84.708	ENSJJAG00000000257	-	99	84.708	Jaculus_jaculus
ENSSBOG00000030886	-	97	51.986	ENSKMAG00000005057	larp7	95	51.215	Kryptolebias_marmoratus
ENSSBOG00000030886	-	97	52.308	ENSLBEG00000020062	larp7	95	52.373	Labrus_bergylta
ENSSBOG00000030886	-	98	60.708	ENSLACG00000013744	LARP7	95	62.522	Latimeria_chalumnae
ENSSBOG00000030886	-	95	50.254	ENSLOCG00000011608	larp7	95	50.254	Lepisosteus_oculatus
ENSSBOG00000030886	-	100	87.372	ENSLAFG00000015769	LARP7	100	87.372	Loxodonta_africana
ENSSBOG00000030886	-	100	94.511	ENSMFAG00000036506	LARP7	100	94.511	Macaca_fascicularis
ENSSBOG00000030886	-	100	94.340	ENSMMUG00000017911	LARP7	100	94.340	Macaca_mulatta
ENSSBOG00000030886	-	100	94.511	ENSMNEG00000034758	LARP7	100	94.511	Macaca_nemestrina
ENSSBOG00000030886	-	100	94.683	ENSMLEG00000026154	LARP7	100	94.683	Mandrillus_leucophaeus
ENSSBOG00000030886	-	97	54.281	ENSMAMG00000005835	larp7	95	55.245	Mastacembelus_armatus
ENSSBOG00000030886	-	96	55.497	ENSMZEG00005002084	larp7	95	54.417	Maylandia_zebra
ENSSBOG00000030886	-	99	71.212	ENSMGAG00000010947	LARP7	99	71.549	Meleagris_gallopavo
ENSSBOG00000030886	-	95	67.972	ENSMAUG00000005625	-	96	68.142	Mesocricetus_auratus
ENSSBOG00000030886	-	100	89.555	ENSMICG00000031035	LARP7	100	89.726	Microcebus_murinus
ENSSBOG00000030886	-	95	83.784	ENSMOCG00000012519	-	96	83.871	Microtus_ochrogaster
ENSSBOG00000030886	-	89	79.423	ENSMOCG00000015761	-	100	79.423	Microtus_ochrogaster
ENSSBOG00000030886	-	99	76.962	ENSMODG00000005669	LARP7	100	77.129	Monodelphis_domestica
ENSSBOG00000030886	-	95	83.453	MGP_CAROLIEiJ_G0025613	-	96	83.363	Mus_caroli
ENSSBOG00000030886	-	95	82.914	ENSMUSG00000027968	Larp7	96	83.005	Mus_musculus
ENSSBOG00000030886	-	99	81.100	MGP_PahariEiJ_G0027060	-	96	82.796	Mus_pahari
ENSSBOG00000030886	-	95	83.483	MGP_SPRETEiJ_G0026566	Larp7	96	83.571	Mus_spretus
ENSSBOG00000030886	-	95	82.396	ENSMPUG00000018052	-	100	82.396	Mustela_putorius_furo
ENSSBOG00000030886	-	100	86.621	ENSMPUG00000008331	-	100	86.278	Mustela_putorius_furo
ENSSBOG00000030886	-	86	77.490	ENSMLUG00000027214	LARP7	100	77.490	Myotis_lucifugus
ENSSBOG00000030886	-	100	82.222	ENSNGAG00000007368	-	96	82.796	Nannospalax_galili
ENSSBOG00000030886	-	100	94.511	ENSNLEG00000016354	LARP7	99	94.511	Nomascus_leucogenys
ENSSBOG00000030886	-	87	75.146	ENSMEUG00000004739	LARP7	100	75.146	Notamacropus_eugenii
ENSSBOG00000030886	-	88	88.722	ENSOPRG00000009594	-	88	88.722	Ochotona_princeps
ENSSBOG00000030886	-	96	82.826	ENSODEG00000011121	LARP7	98	82.826	Octodon_degus
ENSSBOG00000030886	-	95	54.867	ENSONIG00000008763	larp7	95	55.026	Oreochromis_niloticus
ENSSBOG00000030886	-	99	76.174	ENSOANG00000009298	LARP7	99	76.174	Ornithorhynchus_anatinus
ENSSBOG00000030886	-	100	84.932	ENSOCUG00000007073	LARP7	100	84.932	Oryctolagus_cuniculus
ENSSBOG00000030886	-	95	53.430	ENSORLG00000004978	larp7	94	53.571	Oryzias_latipes
ENSSBOG00000030886	-	95	53.597	ENSORLG00020013825	larp7	94	53.750	Oryzias_latipes_hni
ENSSBOG00000030886	-	97	54.021	ENSOMEG00000006920	larp7	95	54.545	Oryzias_melastigma
ENSSBOG00000030886	-	100	89.249	ENSOGAG00000001643	LARP7	100	89.249	Otolemur_garnettii
ENSSBOG00000030886	-	100	85.128	ENSOARG00000001809	LARP7	100	84.786	Ovis_aries
ENSSBOG00000030886	-	100	95.026	ENSPPAG00000038420	LARP7	99	95.026	Pan_paniscus
ENSSBOG00000030886	-	100	87.842	ENSPPRG00000023256	LARP7	100	87.842	Panthera_pardus
ENSSBOG00000030886	-	96	87.143	ENSPTIG00000021146	LARP7	97	86.988	Panthera_tigris_altaica
ENSSBOG00000030886	-	100	95.197	ENSPTRG00000016380	LARP7	100	95.197	Pan_troglodytes
ENSSBOG00000030886	-	100	94.683	ENSPANG00000006701	LARP7	99	94.683	Papio_anubis
ENSSBOG00000030886	-	97	57.812	ENSPKIG00000023484	larp7	94	56.915	Paramormyrops_kingsleyae
ENSSBOG00000030886	-	98	72.061	ENSPSIG00000014419	LARP7	94	72.134	Pelodiscus_sinensis
ENSSBOG00000030886	-	95	82.206	ENSPEMG00000013978	-	96	82.478	Peromyscus_maniculatus_bairdii
ENSSBOG00000030886	-	96	36.806	ENSPMAG00000005362	larp7	93	36.427	Petromyzon_marinus
ENSSBOG00000030886	-	100	75.456	ENSPCIG00000020284	LARP7	98	82.051	Phascolarctos_cinereus
ENSSBOG00000030886	-	97	53.713	ENSPFOG00000000265	larp7	95	53.860	Poecilia_formosa
ENSSBOG00000030886	-	97	53.713	ENSPLAG00000012181	larp7	95	53.860	Poecilia_latipinna
ENSSBOG00000030886	-	97	53.713	ENSPMEG00000007182	larp7	95	53.860	Poecilia_mexicana
ENSSBOG00000030886	-	97	53.979	ENSPREG00000019513	larp7	95	53.901	Poecilia_reticulata
ENSSBOG00000030886	-	100	95.197	ENSPPYG00000015010	LARP7	100	95.197	Pongo_abelii
ENSSBOG00000030886	-	58	96.154	ENSPCAG00000003373	-	67	96.154	Procavia_capensis
ENSSBOG00000030886	-	79	94.000	ENSPCOG00000023946	LARP7	90	94.000	Propithecus_coquereli
ENSSBOG00000030886	-	100	83.904	ENSPVAG00000000282	LARP7	100	83.390	Pteropus_vampyrus
ENSSBOG00000030886	-	95	54.386	ENSPNAG00000017554	larp7	95	54.054	Pygocentrus_nattereri
ENSSBOG00000030886	-	95	80.969	ENSRNOG00000048989	Larp7	96	81.071	Rattus_norvegicus
ENSSBOG00000030886	-	86	96.296	ENSRBIG00000031916	LARP7	99	96.296	Rhinopithecus_bieti
ENSSBOG00000030886	-	100	94.511	ENSRROG00000033414	LARP7	100	94.511	Rhinopithecus_roxellana
ENSSBOG00000030886	-	100	74.958	ENSSHAG00000008153	LARP7	100	74.624	Sarcophilus_harrisii
ENSSBOG00000030886	-	97	55.109	ENSSFOG00015019344	larp7	95	56.348	Scleropages_formosus
ENSSBOG00000030886	-	95	55.300	ENSSMAG00000011296	larp7	95	53.739	Scophthalmus_maximus
ENSSBOG00000030886	-	97	56.529	ENSSDUG00000007045	larp7	95	54.514	Seriola_dumerili
ENSSBOG00000030886	-	52	77.124	ENSSARG00000000190	-	99	77.850	Sorex_araneus
ENSSBOG00000030886	-	97	55.326	ENSSPAG00000016066	larp7	95	55.360	Stegastes_partitus
ENSSBOG00000030886	-	100	87.350	ENSSSCG00000009119	LARP7	100	87.350	Sus_scrofa
ENSSBOG00000030886	-	99	72.712	ENSTGUG00000001804	LARP7	99	72.712	Taeniopygia_guttata
ENSSBOG00000030886	-	97	50.967	ENSTRUG00000004996	larp7	96	50.719	Takifugu_rubripes
ENSSBOG00000030886	-	95	47.857	ENSTNIG00000007183	larp7	95	48.307	Tetraodon_nigroviridis
ENSSBOG00000030886	-	100	80.103	ENSTBEG00000009188	LARP7	100	79.760	Tupaia_belangeri
ENSSBOG00000030886	-	90	84.791	ENSTTRG00000005233	LARP7	100	86.312	Tursiops_truncatus
ENSSBOG00000030886	-	100	88.527	ENSUAMG00000000836	LARP7	100	88.527	Ursus_americanus
ENSSBOG00000030886	-	99	88.021	ENSUMAG00000002263	LARP7	98	88.021	Ursus_maritimus
ENSSBOG00000030886	-	100	88.185	ENSVPAG00000010502	LARP7	100	88.185	Vicugna_pacos
ENSSBOG00000030886	-	100	87.479	ENSVVUG00000002274	LARP7	100	87.136	Vulpes_vulpes
ENSSBOG00000030886	-	98	60.575	ENSXETG00000024097	larp7	95	60.733	Xenopus_tropicalis
ENSSBOG00000030886	-	97	54.513	ENSXCOG00000004883	larp7	84	72.131	Xiphophorus_couchianus
ENSSBOG00000030886	-	97	54.609	ENSXMAG00000008479	larp7	95	55.398	Xiphophorus_maculatus