EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000030924 (Gene tree)
Gene ID: 101047063
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 5060 bases
Position: chrJH378151.1:1340326-1345385
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000029161	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000046042	-	639	XM_010342506	ENSSBOP00000029161	212 (aa)	XP_010340808	A0A2K6UB82

Gene Model

Click here to download ENSSBOG00000030924's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG
sbq03015	mRNA surveillance pathway	KEGG
sbq03040	Spliceosome	KEGG
sbq05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000030924	-	53	32.456	ENSSBOG00000031562	TRA2A	57	33.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030924	-	84	61.170	ENSAPOG00000000183	-	75	61.170	Acanthochromis_polyacanthus
ENSSBOG00000030924	-	86	53.589	ENSACIG00000020351	-	79	56.459	Amphilophus_citrinellus
ENSSBOG00000030924	-	85	70.256	ENSACIG00000006351	alyref	78	67.857	Amphilophus_citrinellus
ENSSBOG00000030924	-	84	62.234	ENSAOCG00000019305	-	75	61.702	Amphiprion_ocellaris
ENSSBOG00000030924	-	87	69.192	ENSAOCG00000014012	alyref	73	76.382	Amphiprion_ocellaris
ENSSBOG00000030924	-	87	69.192	ENSAPEG00000014603	alyref	73	76.382	Amphiprion_percula
ENSSBOG00000030924	-	84	62.234	ENSAPEG00000013527	-	75	61.702	Amphiprion_percula
ENSSBOG00000030924	-	87	67.327	ENSATEG00000004307	alyref	73	74.877	Anabas_testudineus
ENSSBOG00000030924	-	87	61.735	ENSATEG00000000382	-	76	61.224	Anabas_testudineus
ENSSBOG00000030924	-	62	92.593	ENSAPLG00000014745	-	100	90.580	Anas_platyrhynchos
ENSSBOG00000030924	-	87	68.342	ENSACLG00000008432	alyref	81	68.584	Astatotilapia_calliptera
ENSSBOG00000030924	-	84	58.376	ENSACLG00000010184	-	75	59.391	Astatotilapia_calliptera
ENSSBOG00000030924	-	87	73.500	ENSAMXG00000007359	alyref	72	75.124	Astyanax_mexicanus
ENSSBOG00000030924	-	81	52.105	ENSCING00000013568	-	87	47.863	Ciona_intestinalis
ENSSBOG00000030924	-	82	49.451	ENSCSAVG00000003324	-	84	48.246	Ciona_savignyi
ENSSBOG00000030924	-	87	71.717	ENSCSEG00000017800	alyref	74	75.377	Cynoglossus_semilaevis
ENSSBOG00000030924	-	87	71.795	ENSCVAG00000014869	alyref	73	76.650	Cyprinodon_variegatus
ENSSBOG00000030924	-	84	57.297	ENSCVAG00000007789	-	72	55.135	Cyprinodon_variegatus
ENSSBOG00000030924	-	87	75.000	ENSDARG00000077732	alyref	71	76.500	Danio_rerio
ENSSBOG00000030924	-	77	53.714	FBgn0010774	Ref1	65	52.000	Drosophila_melanogaster
ENSSBOG00000030924	-	84	46.875	ENSEBUG00000006305	alyref	91	42.152	Eptatretus_burgeri
ENSSBOG00000030924	-	83	60.112	ENSEBUG00000008253	alyref	65	57.609	Eptatretus_burgeri
ENSSBOG00000030924	-	94	70.335	ENSELUG00000017178	alyref	79	71.364	Esox_lucius
ENSSBOG00000030924	-	87	65.517	ENSELUG00000008849	-	79	66.667	Esox_lucius
ENSSBOG00000030924	-	73	93.038	ENSFALG00000011923	-	100	91.304	Ficedula_albicollis
ENSSBOG00000030924	-	84	55.676	ENSFHEG00000004698	-	72	53.514	Fundulus_heteroclitus
ENSSBOG00000030924	-	87	74.611	ENSFHEG00000019426	alyref	72	76.531	Fundulus_heteroclitus
ENSSBOG00000030924	-	87	71.958	ENSGMOG00000009882	alyref	84	65.455	Gadus_morhua
ENSSBOG00000030924	-	82	59.043	ENSGMOG00000013122	-	100	58.511	Gadus_morhua
ENSSBOG00000030924	-	87	72.165	ENSGAFG00000006014	alyref	71	73.846	Gambusia_affinis
ENSSBOG00000030924	-	84	54.054	ENSGAFG00000007573	-	72	52.432	Gambusia_affinis
ENSSBOG00000030924	-	87	68.342	ENSHBUG00000020196	alyref	81	68.584	Haplochromis_burtoni
ENSSBOG00000030924	-	84	58.794	ENSHBUG00000001454	-	75	59.204	Haplochromis_burtoni
ENSSBOG00000030924	-	82	57.297	ENSHCOG00000012825	-	86	49.776	Hippocampus_comes
ENSSBOG00000030924	-	87	79.144	ENSIPUG00000009469	alyref	72	78.010	Ictalurus_punctatus
ENSSBOG00000030924	-	84	78.652	ENSSTOG00000016570	-	92	79.775	Ictidomys_tridecemlineatus
ENSSBOG00000030924	-	87	72.727	ENSKMAG00000008912	alyref	73	73.869	Kryptolebias_marmoratus
ENSSBOG00000030924	-	87	57.292	ENSKMAG00000006462	-	92	52.361	Kryptolebias_marmoratus
ENSSBOG00000030924	-	87	68.367	ENSLBEG00000023118	alyref	81	66.814	Labrus_bergylta
ENSSBOG00000030924	-	84	55.556	ENSLBEG00000005387	-	76	56.522	Labrus_bergylta
ENSSBOG00000030924	-	83	60.109	ENSLBEG00000012930	-	73	58.564	Labrus_bergylta
ENSSBOG00000030924	-	71	84.076	ENSLOCG00000013879	alyref	96	66.810	Lepisosteus_oculatus
ENSSBOG00000030924	-	84	59.893	ENSMAMG00000005464	-	74	57.754	Mastacembelus_armatus
ENSSBOG00000030924	-	87	71.357	ENSMAMG00000003034	alyref	74	77.000	Mastacembelus_armatus
ENSSBOG00000030924	-	87	68.342	ENSMZEG00005008639	alyref	81	68.584	Maylandia_zebra
ENSSBOG00000030924	-	84	57.868	ENSMZEG00005012096	-	75	58.883	Maylandia_zebra
ENSSBOG00000030924	-	86	52.632	ENSMMOG00000007032	-	79	52.910	Mola_mola
ENSSBOG00000030924	-	86	73.575	ENSMMOG00000012458	alyref	77	71.101	Mola_mola
ENSSBOG00000030924	-	84	59.184	ENSMALG00000006054	-	75	57.360	Monopterus_albus
ENSSBOG00000030924	-	87	78.378	ENSMLUG00000004098	-	71	78.378	Myotis_lucifugus
ENSSBOG00000030924	-	100	72.770	ENSMLUG00000014372	-	80	71.831	Myotis_lucifugus
ENSSBOG00000030924	-	85	67.213	ENSMLUG00000022178	-	80	63.084	Myotis_lucifugus
ENSSBOG00000030924	-	85	69.022	ENSMLUG00000028605	-	67	69.022	Myotis_lucifugus
ENSSBOG00000030924	-	91	61.765	ENSMLUG00000022467	-	88	54.959	Myotis_lucifugus
ENSSBOG00000030924	-	92	66.154	ENSMLUG00000030671	-	73	64.615	Myotis_lucifugus
ENSSBOG00000030924	-	91	64.851	ENSMLUG00000009247	-	83	62.273	Myotis_lucifugus
ENSSBOG00000030924	-	87	76.630	ENSMLUG00000006521	-	70	75.543	Myotis_lucifugus
ENSSBOG00000030924	-	84	95.506	ENSNGAG00000022014	-	90	79.621	Nannospalax_galili
ENSSBOG00000030924	-	87	68.342	ENSNBRG00000001747	alyref	80	68.584	Neolamprologus_brichardi
ENSSBOG00000030924	-	84	58.974	ENSNBRG00000017460	-	75	60.000	Neolamprologus_brichardi
ENSSBOG00000030924	-	87	68.812	ENSONIG00000019434	alyref	80	70.742	Oreochromis_niloticus
ENSSBOG00000030924	-	84	60.938	ENSONIG00000003296	-	74	61.979	Oreochromis_niloticus
ENSSBOG00000030924	-	84	54.000	ENSORLG00020015673	-	92	48.163	Oryzias_latipes_hni
ENSSBOG00000030924	-	87	71.282	ENSORLG00020011942	alyref	72	76.531	Oryzias_latipes_hni
ENSSBOG00000030924	-	84	52.792	ENSORLG00015015143	-	92	46.800	Oryzias_latipes_hsok
ENSSBOG00000030924	-	87	71.282	ENSORLG00015022664	alyref	73	76.531	Oryzias_latipes_hsok
ENSSBOG00000030924	-	87	72.308	ENSOMEG00000019176	alyref	84	66.814	Oryzias_melastigma
ENSSBOG00000030924	-	86	53.403	ENSOMEG00000007158	-	75	51.020	Oryzias_melastigma
ENSSBOG00000030924	-	94	90.500	ENSPPAG00000036403	-	77	90.500	Pan_paniscus
ENSSBOG00000030924	-	87	75.000	ENSPKIG00000006233	-	61	76.042	Paramormyrops_kingsleyae
ENSSBOG00000030924	-	87	76.471	ENSPKIG00000007070	alyref	71	76.064	Paramormyrops_kingsleyae
ENSSBOG00000030924	-	85	70.984	ENSPMGG00000016600	alyref	77	65.789	Periophthalmus_magnuspinnatus
ENSSBOG00000030924	-	52	61.864	ENSPMGG00000012994	-	67	64.602	Periophthalmus_magnuspinnatus
ENSSBOG00000030924	-	84	94.944	ENSPEMG00000016628	-	77	93.820	Peromyscus_maniculatus_bairdii
ENSSBOG00000030924	-	84	55.376	ENSPFOG00000017094	-	72	53.226	Poecilia_formosa
ENSSBOG00000030924	-	87	69.231	ENSPFOG00000022825	alyref	70	70.769	Poecilia_formosa
ENSSBOG00000030924	-	84	55.376	ENSPLAG00000014380	-	72	53.226	Poecilia_latipinna
ENSSBOG00000030924	-	87	69.588	ENSPLAG00000006948	alyref	71	70.769	Poecilia_latipinna
ENSSBOG00000030924	-	87	69.588	ENSPMEG00000003547	alyref	71	70.769	Poecilia_mexicana
ENSSBOG00000030924	-	84	55.376	ENSPMEG00000023039	-	72	53.226	Poecilia_mexicana
ENSSBOG00000030924	-	87	70.103	ENSPREG00000015795	alyref	83	65.333	Poecilia_reticulata
ENSSBOG00000030924	-	84	57.065	ENSPREG00000003649	-	73	56.522	Poecilia_reticulata
ENSSBOG00000030924	-	87	68.342	ENSPNYG00000017498	alyref	81	68.584	Pundamilia_nyererei
ENSSBOG00000030924	-	83	56.771	ENSPNYG00000002879	-	73	56.771	Pundamilia_nyererei
ENSSBOG00000030924	-	87	73.333	ENSPNAG00000002531	alyref	86	69.528	Pygocentrus_nattereri
ENSSBOG00000030924	-	88	72.727	ENSSHAG00000000609	-	83	71.354	Sarcophilus_harrisii
ENSSBOG00000030924	-	86	68.817	ENSSHAG00000012866	-	72	68.817	Sarcophilus_harrisii
ENSSBOG00000030924	-	93	73.659	ENSSFOG00015003923	alyref	76	77.561	Scleropages_formosus
ENSSBOG00000030924	-	83	82.609	ENSSFOG00015003678	alyref	83	80.874	Scleropages_formosus
ENSSBOG00000030924	-	87	57.282	ENSSMAG00000011169	-	95	50.407	Scophthalmus_maximus
ENSSBOG00000030924	-	87	68.367	ENSSMAG00000009283	alyref	82	70.089	Scophthalmus_maximus
ENSSBOG00000030924	-	87	68.687	ENSSDUG00000016158	alyref	73	75.879	Seriola_dumerili
ENSSBOG00000030924	-	87	72.864	ENSSLDG00000017803	alyref	73	76.000	Seriola_lalandi_dorsalis
ENSSBOG00000030924	-	83	61.828	ENSSPAG00000017028	-	72	62.366	Stegastes_partitus
ENSSBOG00000030924	-	84	58.854	ENSTRUG00000003051	-	75	56.771	Takifugu_rubripes
ENSSBOG00000030924	-	87	72.139	ENSTNIG00000011595	alyref	83	71.642	Tetraodon_nigroviridis
ENSSBOG00000030924	-	84	63.736	ENSTNIG00000014136	-	73	60.773	Tetraodon_nigroviridis
ENSSBOG00000030924	-	84	97.191	ENSVVUG00000000272	-	82	97.191	Vulpes_vulpes
ENSSBOG00000030924	-	85	71.204	ENSXCOG00000018047	alyref	71	71.795	Xiphophorus_couchianus
ENSSBOG00000030924	-	85	71.204	ENSXMAG00000012218	alyref	71	71.795	Xiphophorus_maculatus
ENSSBOG00000030924	-	84	56.216	ENSXMAG00000018086	-	72	54.054	Xiphophorus_maculatus