EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000030980 (Gene tree)
Gene ID: 101051913
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 363206 bases
Position: chrJH378289.1:1107184-1470389
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000029300	CMS1	PF14617.6	1.1e-32	1	1
ENSSBOP00000029304	CMS1	PF14617.6	2.5e-32	1	1
ENSSBOP00000029304	DEAD	PF00270.29	5e-06	1	1
ENSSBOP00000029300	DEAD	PF00270.29	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000046185	CMSS1-202	1380	XM_003943534	ENSSBOP00000029304	262 (aa)	XP_003943583	A0A2K6UBQ2
ENSSBOT00000046181	CMSS1-201	843	-	ENSSBOP00000029300	280 (aa)	-	A0A2K6UBM8

Gene Model

Click here to download ENSSBOG00000030980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000030980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000030980	CMSS1	100	93.130	ENSG00000184220	CMSS1	100	93.130	Homo_sapiens
ENSSBOG00000030980	CMSS1	77	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSSBOG00000030980	CMSS1	99	88.846	ENSAMEG00000004092	CMSS1	100	88.846	Ailuropoda_melanoleuca
ENSSBOG00000030980	CMSS1	77	53.960	ENSACIG00000021854	cmss1	91	49.590	Amphilophus_citrinellus
ENSSBOG00000030980	CMSS1	77	64.356	ENSAOCG00000013361	cmss1	83	58.333	Amphiprion_ocellaris
ENSSBOG00000030980	CMSS1	77	64.356	ENSAPEG00000005829	cmss1	83	58.091	Amphiprion_percula
ENSSBOG00000030980	CMSS1	79	64.078	ENSATEG00000008209	cmss1	97	54.887	Anabas_testudineus
ENSSBOG00000030980	CMSS1	87	67.391	ENSAPLG00000010542	CMSS1	100	67.391	Anas_platyrhynchos
ENSSBOG00000030980	CMSS1	99	60.821	ENSACAG00000011065	CMSS1	98	60.821	Anolis_carolinensis
ENSSBOG00000030980	CMSS1	100	96.183	ENSANAG00000023565	CMSS1	100	96.183	Aotus_nancymaae
ENSSBOG00000030980	CMSS1	77	61.386	ENSACLG00000027294	cmss1	69	61.386	Astatotilapia_calliptera
ENSSBOG00000030980	CMSS1	76	55.000	ENSAMXG00000002046	cmss1	82	52.263	Astyanax_mexicanus
ENSSBOG00000030980	CMSS1	95	87.952	ENSBTAG00000013663	CMSS1	100	82.143	Bos_taurus
ENSSBOG00000030980	CMSS1	100	95.420	ENSCJAG00000000610	CMSS1	100	95.420	Callithrix_jacchus
ENSSBOG00000030980	CMSS1	99	91.154	ENSCAFG00000009230	CMSS1	94	91.154	Canis_familiaris
ENSSBOG00000030980	CMSS1	88	83.621	ENSCAFG00020024156	-	72	83.621	Canis_lupus_dingo
ENSSBOG00000030980	CMSS1	98	91.085	ENSCAFG00020009464	-	94	91.085	Canis_lupus_dingo
ENSSBOG00000030980	CMSS1	98	88.372	ENSCHIG00000013003	CMSS1	93	88.372	Capra_hircus
ENSSBOG00000030980	CMSS1	99	89.231	ENSTSYG00000009266	CMSS1	99	89.231	Carlito_syrichta
ENSSBOG00000030980	CMSS1	85	71.930	ENSCAPG00000013584	CMSS1	87	78.646	Cavia_aperea
ENSSBOG00000030980	CMSS1	99	87.259	ENSCPOG00000014680	CMSS1	100	81.786	Cavia_porcellus
ENSSBOG00000030980	CMSS1	100	97.710	ENSCCAG00000034685	CMSS1	100	97.710	Cebus_capucinus
ENSSBOG00000030980	CMSS1	100	94.275	ENSCATG00000031980	CMSS1	100	94.275	Cercocebus_atys
ENSSBOG00000030980	CMSS1	87	92.576	ENSCLAG00000011241	CMSS1	98	92.576	Chinchilla_lanigera
ENSSBOG00000030980	CMSS1	94	94.694	ENSCSAG00000006024	CMSS1	100	94.694	Chlorocebus_sabaeus
ENSSBOG00000030980	CMSS1	99	69.231	ENSCHOG00000012098	CMSS1	94	69.231	Choloepus_hoffmanni
ENSSBOG00000030980	CMSS1	71	41.361	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSSBOG00000030980	CMSS1	99	93.822	ENSCANG00000031337	CMSS1	99	93.487	Colobus_angolensis_palliatus
ENSSBOG00000030980	CMSS1	97	82.353	ENSCGRG00001014305	Cmss1	92	82.353	Cricetulus_griseus_chok1gshd
ENSSBOG00000030980	CMSS1	97	82.353	ENSCGRG00000006722	Cmss1	99	82.353	Cricetulus_griseus_crigri
ENSSBOG00000030980	CMSS1	77	61.386	ENSCSEG00000004958	cmss1	97	51.049	Cynoglossus_semilaevis
ENSSBOG00000030980	CMSS1	88	57.447	ENSCVAG00000005039	cmss1	83	57.500	Cyprinodon_variegatus
ENSSBOG00000030980	CMSS1	86	52.381	ENSDARG00000112579	cmss1	84	50.407	Danio_rerio
ENSSBOG00000030980	CMSS1	99	85.385	ENSDNOG00000040418	CMSS1	93	84.733	Dasypus_novemcinctus
ENSSBOG00000030980	CMSS1	99	86.873	ENSDORG00000010461	Cmss1	100	81.429	Dipodomys_ordii
ENSSBOG00000030980	CMSS1	50	50.758	ENSEBUG00000002156	-	96	50.758	Eptatretus_burgeri
ENSSBOG00000030980	CMSS1	90	88.983	ENSEASG00005010966	CMSS1	99	91.324	Equus_asinus_asinus
ENSSBOG00000030980	CMSS1	98	88.760	ENSECAG00000015662	CMSS1	99	90.265	Equus_caballus
ENSSBOG00000030980	CMSS1	87	62.281	ENSEEUG00000007624	-	82	62.281	Erinaceus_europaeus
ENSSBOG00000030980	CMSS1	91	57.083	ENSELUG00000019459	cmss1	80	57.083	Esox_lucius
ENSSBOG00000030980	CMSS1	99	92.664	ENSFCAG00000044577	CMSS1	100	86.786	Felis_catus
ENSSBOG00000030980	CMSS1	90	64.135	ENSFALG00000005816	CMSS1	100	64.135	Ficedula_albicollis
ENSSBOG00000030980	CMSS1	87	89.912	ENSFDAG00000012577	CMSS1	100	89.912	Fukomys_damarensis
ENSSBOG00000030980	CMSS1	87	59.740	ENSFHEG00000012008	cmss1	96	56.098	Fundulus_heteroclitus
ENSSBOG00000030980	CMSS1	77	60.891	ENSGMOG00000016729	cmss1	72	60.891	Gadus_morhua
ENSSBOG00000030980	CMSS1	100	62.500	ENSGALG00000015267	CMSS1	100	63.218	Gallus_gallus
ENSSBOG00000030980	CMSS1	79	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSSBOG00000030980	CMSS1	77	55.941	ENSGACG00000002798	cmss1	72	55.941	Gasterosteus_aculeatus
ENSSBOG00000030980	CMSS1	90	70.886	ENSGAGG00000019861	CMSS1	92	70.886	Gopherus_agassizii
ENSSBOG00000030980	CMSS1	100	94.275	ENSGGOG00000014125	CMSS1	100	94.275	Gorilla_gorilla
ENSSBOG00000030980	CMSS1	77	61.386	ENSHBUG00000008431	cmss1	85	54.772	Haplochromis_burtoni
ENSSBOG00000030980	CMSS1	97	83.858	ENSHGLG00000019481	CMSS1	100	83.858	Heterocephalus_glaber_female
ENSSBOG00000030980	CMSS1	98	83.721	ENSHGLG00100010314	CMSS1	100	83.721	Heterocephalus_glaber_male
ENSSBOG00000030980	CMSS1	85	63.274	ENSHCOG00000003222	cmss1	81	61.250	Hippocampus_comes
ENSSBOG00000030980	CMSS1	91	52.479	ENSIPUG00000011591	cmss1	83	52.479	Ictalurus_punctatus
ENSSBOG00000030980	CMSS1	99	89.575	ENSSTOG00000019366	CMSS1	100	84.286	Ictidomys_tridecemlineatus
ENSSBOG00000030980	CMSS1	98	82.946	ENSJJAG00000014894	Cmss1	90	90.594	Jaculus_jaculus
ENSSBOG00000030980	CMSS1	77	53.960	ENSKMAG00000002390	cmss1	81	53.960	Kryptolebias_marmoratus
ENSSBOG00000030980	CMSS1	84	53.333	ENSLBEG00000006298	cmss1	83	58.621	Labrus_bergylta
ENSSBOG00000030980	CMSS1	87	63.043	ENSLACG00000009293	CMSS1	100	63.043	Latimeria_chalumnae
ENSSBOG00000030980	CMSS1	86	56.388	ENSLOCG00000009391	cmss1	86	54.694	Lepisosteus_oculatus
ENSSBOG00000030980	CMSS1	87	89.474	ENSLAFG00000017509	CMSS1	100	89.474	Loxodonta_africana
ENSSBOG00000030980	CMSS1	100	94.656	ENSMFAG00000045006	CMSS1	100	94.656	Macaca_fascicularis
ENSSBOG00000030980	CMSS1	100	94.275	ENSMMUG00000002939	CMSS1	100	94.275	Macaca_mulatta
ENSSBOG00000030980	CMSS1	100	94.275	ENSMNEG00000031315	CMSS1	100	94.275	Macaca_nemestrina
ENSSBOG00000030980	CMSS1	100	93.893	ENSMLEG00000033660	CMSS1	100	93.893	Mandrillus_leucophaeus
ENSSBOG00000030980	CMSS1	77	63.366	ENSMAMG00000017176	cmss1	83	57.676	Mastacembelus_armatus
ENSSBOG00000030980	CMSS1	77	61.386	ENSMZEG00005021886	cmss1	69	61.386	Maylandia_zebra
ENSSBOG00000030980	CMSS1	87	67.544	ENSMGAG00000014360	CMSS1	100	67.544	Meleagris_gallopavo
ENSSBOG00000030980	CMSS1	98	58.366	ENSMAUG00000020609	Cmss1	90	58.366	Mesocricetus_auratus
ENSSBOG00000030980	CMSS1	100	91.221	ENSMICG00000048977	CMSS1	100	91.221	Microcebus_murinus
ENSSBOG00000030980	CMSS1	99	80.695	ENSMOCG00000021937	Cmss1	93	80.695	Microtus_ochrogaster
ENSSBOG00000030980	CMSS1	77	61.386	ENSMMOG00000019794	cmss1	89	58.636	Mola_mola
ENSSBOG00000030980	CMSS1	98	74.615	ENSMODG00000002275	CMSS1	97	74.615	Monodelphis_domestica
ENSSBOG00000030980	CMSS1	77	64.851	ENSMALG00000004250	cmss1	69	64.851	Monopterus_albus
ENSSBOG00000030980	CMSS1	99	80.769	MGP_CAROLIEiJ_G0020824	Cmss1	93	80.769	Mus_caroli
ENSSBOG00000030980	CMSS1	99	81.538	ENSMUSG00000022748	Cmss1	93	81.538	Mus_musculus
ENSSBOG00000030980	CMSS1	99	80.385	MGP_PahariEiJ_G0016524	Cmss1	93	80.385	Mus_pahari
ENSSBOG00000030980	CMSS1	99	81.154	MGP_SPRETEiJ_G0021724	Cmss1	93	81.154	Mus_spretus
ENSSBOG00000030980	CMSS1	93	93.852	ENSMPUG00000011324	CMSS1	100	91.954	Mustela_putorius_furo
ENSSBOG00000030980	CMSS1	99	89.734	ENSMLUG00000001131	CMSS1	99	89.734	Myotis_lucifugus
ENSSBOG00000030980	CMSS1	99	85.385	ENSNGAG00000020316	Cmss1	100	80.357	Nannospalax_galili
ENSSBOG00000030980	CMSS1	77	60.891	ENSNBRG00000003095	cmss1	83	55.372	Neolamprologus_brichardi
ENSSBOG00000030980	CMSS1	100	95.038	ENSNLEG00000034172	CMSS1	100	95.038	Nomascus_leucogenys
ENSSBOG00000030980	CMSS1	87	65.789	ENSMEUG00000014505	CMSS1	100	65.789	Notamacropus_eugenii
ENSSBOG00000030980	CMSS1	98	91.085	ENSOPRG00000002986	CMSS1	92	91.085	Ochotona_princeps
ENSSBOG00000030980	CMSS1	90	74.790	ENSODEG00000009446	-	92	74.790	Octodon_degus
ENSSBOG00000030980	CMSS1	98	80.156	ENSODEG00000003558	-	91	80.156	Octodon_degus
ENSSBOG00000030980	CMSS1	98	74.419	ENSODEG00000001853	-	92	74.419	Octodon_degus
ENSSBOG00000030980	CMSS1	99	85.328	ENSODEG00000005226	-	100	80.357	Octodon_degus
ENSSBOG00000030980	CMSS1	77	60.396	ENSONIG00000006678	cmss1	88	54.733	Oreochromis_niloticus
ENSSBOG00000030980	CMSS1	98	71.538	ENSOANG00000007529	CMSS1	100	73.391	Ornithorhynchus_anatinus
ENSSBOG00000030980	CMSS1	99	90.769	ENSOCUG00000025366	CMSS1	94	90.769	Oryctolagus_cuniculus
ENSSBOG00000030980	CMSS1	91	57.851	ENSORLG00000020340	cmss1	78	60.699	Oryzias_latipes
ENSSBOG00000030980	CMSS1	87	54.310	ENSORLG00020012235	cmss1	98	54.077	Oryzias_latipes_hni
ENSSBOG00000030980	CMSS1	77	57.561	ENSORLG00015015551	cmss1	75	57.561	Oryzias_latipes_hsok
ENSSBOG00000030980	CMSS1	77	64.356	ENSOMEG00000012555	cmss1	70	64.356	Oryzias_melastigma
ENSSBOG00000030980	CMSS1	87	91.667	ENSOGAG00000002045	CMSS1	100	91.667	Otolemur_garnettii
ENSSBOG00000030980	CMSS1	98	88.417	ENSOARG00000017899	CMSS1	89	88.417	Ovis_aries
ENSSBOG00000030980	CMSS1	100	93.893	ENSPPAG00000038515	CMSS1	95	94.595	Pan_paniscus
ENSSBOG00000030980	CMSS1	99	92.278	ENSPPRG00000016767	CMSS1	100	86.429	Panthera_pardus
ENSSBOG00000030980	CMSS1	99	91.892	ENSPTIG00000018274	CMSS1	100	86.071	Panthera_tigris_altaica
ENSSBOG00000030980	CMSS1	100	93.893	ENSPTRG00000015157	CMSS1	100	94.694	Pan_troglodytes
ENSSBOG00000030980	CMSS1	100	90.458	ENSPANG00000019980	CMSS1	99	91.120	Papio_anubis
ENSSBOG00000030980	CMSS1	86	60.000	ENSPKIG00000012609	cmss1	88	59.244	Paramormyrops_kingsleyae
ENSSBOG00000030980	CMSS1	87	71.616	ENSPSIG00000003849	CMSS1	100	71.616	Pelodiscus_sinensis
ENSSBOG00000030980	CMSS1	84	57.080	ENSPMGG00000010286	cmss1	87	60.591	Periophthalmus_magnuspinnatus
ENSSBOG00000030980	CMSS1	99	81.467	ENSPEMG00000016384	Cmss1	92	81.467	Peromyscus_maniculatus_bairdii
ENSSBOG00000030980	CMSS1	78	52.451	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSSBOG00000030980	CMSS1	99	74.046	ENSPCIG00000015656	CMSS1	99	74.046	Phascolarctos_cinereus
ENSSBOG00000030980	CMSS1	77	62.871	ENSPFOG00000016849	cmss1	84	58.750	Poecilia_formosa
ENSSBOG00000030980	CMSS1	77	62.376	ENSPLAG00000008323	cmss1	84	58.333	Poecilia_latipinna
ENSSBOG00000030980	CMSS1	77	62.871	ENSPMEG00000021020	cmss1	83	58.750	Poecilia_mexicana
ENSSBOG00000030980	CMSS1	89	59.583	ENSPREG00000007618	cmss1	82	59.583	Poecilia_reticulata
ENSSBOG00000030980	CMSS1	99	93.436	ENSPPYG00000013606	CMSS1	95	92.720	Pongo_abelii
ENSSBOG00000030980	CMSS1	100	91.221	ENSPCOG00000020035	CMSS1	100	91.221	Propithecus_coquereli
ENSSBOG00000030980	CMSS1	99	79.151	ENSPVAG00000017031	CMSS1	100	74.643	Pteropus_vampyrus
ENSSBOG00000030980	CMSS1	67	63.068	ENSPNYG00000013428	cmss1	65	63.068	Pundamilia_nyererei
ENSSBOG00000030980	CMSS1	98	49.270	ENSPNAG00000007912	cmss1	93	49.270	Pygocentrus_nattereri
ENSSBOG00000030980	CMSS1	99	80.843	ENSRNOG00000027888	Cmss1	100	80.843	Rattus_norvegicus
ENSSBOG00000030980	CMSS1	100	92.748	ENSRBIG00000037931	CMSS1	100	92.748	Rhinopithecus_bieti
ENSSBOG00000030980	CMSS1	100	92.748	ENSRROG00000042910	CMSS1	100	92.748	Rhinopithecus_roxellana
ENSSBOG00000030980	CMSS1	95	73.810	ENSSHAG00000009321	CMSS1	99	73.810	Sarcophilus_harrisii
ENSSBOG00000030980	CMSS1	86	61.304	ENSSFOG00015001509	cmss1	82	60.504	Scleropages_formosus
ENSSBOG00000030980	CMSS1	91	59.091	ENSSMAG00000001653	cmss1	83	59.091	Scophthalmus_maximus
ENSSBOG00000030980	CMSS1	86	59.389	ENSSDUG00000007719	cmss1	83	58.091	Seriola_dumerili
ENSSBOG00000030980	CMSS1	79	62.802	ENSSLDG00000012300	cmss1	79	56.250	Seriola_lalandi_dorsalis
ENSSBOG00000030980	CMSS1	99	74.517	ENSSARG00000003584	CMSS1	92	74.517	Sorex_araneus
ENSSBOG00000030980	CMSS1	86	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSSBOG00000030980	CMSS1	79	63.592	ENSSPAG00000019182	cmss1	83	53.903	Stegastes_partitus
ENSSBOG00000030980	CMSS1	99	92.664	ENSSSCG00000011970	CMSS1	100	86.786	Sus_scrofa
ENSSBOG00000030980	CMSS1	87	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSSBOG00000030980	CMSS1	77	60.891	ENSTRUG00000015265	cmss1	84	55.882	Takifugu_rubripes
ENSSBOG00000030980	CMSS1	77	55.446	ENSTNIG00000002880	cmss1	87	50.628	Tetraodon_nigroviridis
ENSSBOG00000030980	CMSS1	87	67.982	ENSTBEG00000016722	CMSS1	81	67.982	Tupaia_belangeri
ENSSBOG00000030980	CMSS1	99	87.645	ENSTTRG00000001562	CMSS1	100	82.143	Tursiops_truncatus
ENSSBOG00000030980	CMSS1	99	90.385	ENSUAMG00000024209	CMSS1	99	93.243	Ursus_americanus
ENSSBOG00000030980	CMSS1	99	90.347	ENSUMAG00000001983	CMSS1	99	90.310	Ursus_maritimus
ENSSBOG00000030980	CMSS1	87	74.561	ENSVPAG00000000263	CMSS1	82	74.561	Vicugna_pacos
ENSSBOG00000030980	CMSS1	77	93.564	ENSVVUG00000007776	-	80	93.564	Vulpes_vulpes
ENSSBOG00000030980	CMSS1	94	90.650	ENSVVUG00000021647	-	100	90.650	Vulpes_vulpes
ENSSBOG00000030980	CMSS1	89	59.657	ENSXETG00000011858	cmss1	83	59.657	Xenopus_tropicalis
ENSSBOG00000030980	CMSS1	79	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSSBOG00000030980	CMSS1	79	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus