EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000031053 (Gene tree)
Gene ID: 101034968
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 16898 bases
Position: chrJH378156.1:9757057-9773954
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000029466	RRM_1	PF00076.22	1.3e-18	1	1
ENSSBOP00000029462	RRM_1	PF00076.22	4.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000046349	RBM38-202	324	-	ENSSBOP00000029466	107 (aa)	-	A0A2K6UC35
ENSSBOT00000046345	RBM38-201	2125	XM_003932617	ENSSBOP00000029462	216 (aa)	XP_003932666	A0A2K6UC17

Gene Model

Click here to download ENSSBOG00000031053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000031053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000031053	RBM38	77	37.333	ENSSBOG00000034299	-	58	37.333
ENSSBOG00000031053	RBM38	92	91.837	ENSSBOG00000030002	RBM24	100	68.487
ENSSBOG00000031053	RBM38	73	44.118	ENSSBOG00000020034	-	55	44.118
ENSSBOG00000031053	RBM38	64	40.000	ENSSBOG00000020829	-	83	40.000
ENSSBOG00000031053	RBM38	86	36.364	ENSSBOG00000030259	MSI1	83	36.364
ENSSBOG00000031053	RBM38	72	42.373	ENSSBOG00000026425	MSI2	91	39.286
ENSSBOG00000031053	RBM38	70	39.474	ENSSBOG00000026502	-	78	39.474
ENSSBOG00000031053	RBM38	84	42.857	ENSSBOG00000005245	HNRNPA2B1	64	42.857
ENSSBOG00000031053	RBM38	70	42.105	ENSSBOG00000005354	-	55	42.105
ENSSBOG00000031053	RBM38	81	42.045	ENSSBOG00000021043	CIRBP	54	41.304
ENSSBOG00000031053	RBM38	65	31.429	ENSSBOG00000020014	SLIRP	73	32.353
ENSSBOG00000031053	RBM38	70	39.474	ENSSBOG00000035691	-	67	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000031053	RBM38	100	99.065	ENSG00000132819	RBM38	100	96.835	Homo_sapiens
ENSSBOG00000031053	RBM38	93	90.099	ENSAPOG00000009939	-	94	68.018	Acanthochromis_polyacanthus
ENSSBOG00000031053	RBM38	92	85.859	ENSAPOG00000003301	rbm38	93	58.228	Acanthochromis_polyacanthus
ENSSBOG00000031053	RBM38	92	85.859	ENSACIG00000000010	rbm38	91	56.652	Amphilophus_citrinellus
ENSSBOG00000031053	RBM38	92	92.929	ENSACIG00000012502	-	100	89.744	Amphilophus_citrinellus
ENSSBOG00000031053	RBM38	97	87.736	ENSAOCG00000012559	RBM38	90	67.873	Amphiprion_ocellaris
ENSSBOG00000031053	RBM38	92	85.859	ENSAOCG00000013497	-	93	58.228	Amphiprion_ocellaris
ENSSBOG00000031053	RBM38	93	90.099	ENSAPEG00000023581	-	95	65.546	Amphiprion_percula
ENSSBOG00000031053	RBM38	92	85.859	ENSAPEG00000013137	rbm38	93	58.228	Amphiprion_percula
ENSSBOG00000031053	RBM38	93	89.109	ENSATEG00000016710	-	92	66.810	Anabas_testudineus
ENSSBOG00000031053	RBM38	92	84.848	ENSATEG00000016366	rbm38	94	59.821	Anabas_testudineus
ENSSBOG00000031053	RBM38	93	91.919	ENSACAG00000016238	RBM38	90	78.082	Anolis_carolinensis
ENSSBOG00000031053	RBM38	100	100.000	ENSANAG00000031959	RBM38	100	98.148	Aotus_nancymaae
ENSSBOG00000031053	RBM38	92	91.000	ENSACLG00000019514	-	92	67.241	Astatotilapia_calliptera
ENSSBOG00000031053	RBM38	93	91.089	ENSAMXG00000015601	-	94	67.686	Astyanax_mexicanus
ENSSBOG00000031053	RBM38	86	88.043	ENSAMXG00000038120	rbm38	76	65.405	Astyanax_mexicanus
ENSSBOG00000031053	RBM38	99	99.057	ENSBTAG00000008105	RBM38	90	94.444	Bos_taurus
ENSSBOG00000031053	RBM38	83	85.393	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSSBOG00000031053	RBM38	100	100.000	ENSCJAG00000019139	RBM38	90	99.074	Callithrix_jacchus
ENSSBOG00000031053	RBM38	100	99.065	ENSCAFG00020021943	RBM38	90	94.907	Canis_lupus_dingo
ENSSBOG00000031053	RBM38	99	98.113	ENSCHIG00000002609	RBM38	90	93.056	Capra_hircus
ENSSBOG00000031053	RBM38	100	100.000	ENSCPOG00000012781	RBM38	90	94.444	Cavia_porcellus
ENSSBOG00000031053	RBM38	100	100.000	ENSCCAG00000036872	RBM38	90	99.074	Cebus_capucinus
ENSSBOG00000031053	RBM38	100	100.000	ENSCATG00000032133	RBM38	88	100.000	Cercocebus_atys
ENSSBOG00000031053	RBM38	100	100.000	ENSCLAG00000005906	RBM38	94	94.444	Chinchilla_lanigera
ENSSBOG00000031053	RBM38	100	100.000	ENSCSAG00000015503	RBM38	90	96.759	Chlorocebus_sabaeus
ENSSBOG00000031053	RBM38	92	94.898	ENSCPBG00000024059	RBM38	100	81.193	Chrysemys_picta_bellii
ENSSBOG00000031053	RBM38	91	84.536	ENSCING00000025102	-	86	56.039	Ciona_intestinalis
ENSSBOG00000031053	RBM38	91	84.536	ENSCSAVG00000001132	-	76	57.073	Ciona_savignyi
ENSSBOG00000031053	RBM38	100	78.505	ENSCANG00000030105	-	79	73.148	Colobus_angolensis_palliatus
ENSSBOG00000031053	RBM38	100	98.131	ENSCGRG00001012928	Rbm38	91	94.444	Cricetulus_griseus_chok1gshd
ENSSBOG00000031053	RBM38	93	89.109	ENSCSEG00000004701	-	93	72.273	Cynoglossus_semilaevis
ENSSBOG00000031053	RBM38	90	82.292	ENSCSEG00000020943	rbm38	60	61.413	Cynoglossus_semilaevis
ENSSBOG00000031053	RBM38	88	95.745	ENSCVAG00000005472	-	92	67.660	Cyprinodon_variegatus
ENSSBOG00000031053	RBM38	86	91.304	ENSCVAG00000015952	rbm38	91	58.621	Cyprinodon_variegatus
ENSSBOG00000031053	RBM38	88	92.553	ENSDARG00000058818	rbm38	92	63.677	Danio_rerio
ENSSBOG00000031053	RBM38	100	89.352	ENSDNOG00000032004	RBM38	100	89.352	Dasypus_novemcinctus
ENSSBOG00000031053	RBM38	100	85.047	ENSEBUG00000015164	rbm38	66	85.047	Eptatretus_burgeri
ENSSBOG00000031053	RBM38	100	98.131	ENSECAG00000007700	RBM38	90	94.444	Equus_caballus
ENSSBOG00000031053	RBM38	99	95.283	ENSEEUG00000013489	RBM38	91	93.548	Erinaceus_europaeus
ENSSBOG00000031053	RBM38	92	89.000	ENSELUG00000005849	-	95	66.667	Esox_lucius
ENSSBOG00000031053	RBM38	92	88.889	ENSELUG00000000585	-	87	65.672	Esox_lucius
ENSSBOG00000031053	RBM38	100	98.131	ENSFCAG00000042916	RBM38	88	98.131	Felis_catus
ENSSBOG00000031053	RBM38	96	93.204	ENSFALG00000010805	RBM38	90	84.393	Ficedula_albicollis
ENSSBOG00000031053	RBM38	88	95.745	ENSFHEG00000006160	-	92	72.685	Fundulus_heteroclitus
ENSSBOG00000031053	RBM38	87	91.398	ENSFHEG00000017748	rbm38	91	57.082	Fundulus_heteroclitus
ENSSBOG00000031053	RBM38	88	93.617	ENSGMOG00000016655	-	96	76.374	Gadus_morhua
ENSSBOG00000031053	RBM38	92	94.898	ENSGALG00000026081	RBM38	100	79.358	Gallus_gallus
ENSSBOG00000031053	RBM38	92	88.000	ENSGACG00000009873	-	100	68.444	Gasterosteus_aculeatus
ENSSBOG00000031053	RBM38	92	84.848	ENSGACG00000015224	rbm38	98	62.736	Gasterosteus_aculeatus
ENSSBOG00000031053	RBM38	92	94.898	ENSGAGG00000001187	RBM38	100	81.651	Gopherus_agassizii
ENSSBOG00000031053	RBM38	92	84.848	ENSHBUG00000012058	rbm38	92	60.444	Haplochromis_burtoni
ENSSBOG00000031053	RBM38	93	90.099	ENSHBUG00000011778	-	92	71.689	Haplochromis_burtoni
ENSSBOG00000031053	RBM38	100	99.065	ENSHGLG00000015077	RBM38	90	91.667	Heterocephalus_glaber_female
ENSSBOG00000031053	RBM38	93	89.109	ENSHCOG00000005622	-	52	75.135	Hippocampus_comes
ENSSBOG00000031053	RBM38	84	85.556	ENSHCOG00000019040	rbm38	65	68.212	Hippocampus_comes
ENSSBOG00000031053	RBM38	93	91.089	ENSIPUG00000019349	-	94	65.801	Ictalurus_punctatus
ENSSBOG00000031053	RBM38	54	98.276	ENSJJAG00000016299	-	73	98.276	Jaculus_jaculus
ENSSBOG00000031053	RBM38	83	86.517	ENSKMAG00000012402	rbm38	98	54.661	Kryptolebias_marmoratus
ENSSBOG00000031053	RBM38	92	85.859	ENSLBEG00000018878	rbm38	91	57.940	Labrus_bergylta
ENSSBOG00000031053	RBM38	88	93.617	ENSLBEG00000016163	RBM38	92	70.776	Labrus_bergylta
ENSSBOG00000031053	RBM38	93	91.000	ENSLOCG00000003456	rbm38	92	71.689	Lepisosteus_oculatus
ENSSBOG00000031053	RBM38	100	100.000	ENSMFAG00000043808	RBM38	88	100.000	Macaca_fascicularis
ENSSBOG00000031053	RBM38	100	100.000	ENSMMUG00000031391	RBM38	88	100.000	Macaca_mulatta
ENSSBOG00000031053	RBM38	100	100.000	ENSMNEG00000034683	RBM38	88	100.000	Macaca_nemestrina
ENSSBOG00000031053	RBM38	87	81.720	ENSMLEG00000043261	-	88	83.486	Mandrillus_leucophaeus
ENSSBOG00000031053	RBM38	92	84.848	ENSMAMG00000024135	rbm38	91	57.511	Mastacembelus_armatus
ENSSBOG00000031053	RBM38	93	90.099	ENSMAMG00000020499	RBM38	95	66.667	Mastacembelus_armatus
ENSSBOG00000031053	RBM38	93	90.099	ENSMZEG00005000849	-	92	71.689	Maylandia_zebra
ENSSBOG00000031053	RBM38	92	84.848	ENSMZEG00005026036	rbm38	93	56.303	Maylandia_zebra
ENSSBOG00000031053	RBM38	100	98.131	ENSMAUG00000021211	Rbm38	91	93.981	Mesocricetus_auratus
ENSSBOG00000031053	RBM38	100	97.222	ENSMICG00000038011	RBM38	100	97.222	Microcebus_murinus
ENSSBOG00000031053	RBM38	100	97.196	ENSMOCG00000008715	Rbm38	91	94.444	Microtus_ochrogaster
ENSSBOG00000031053	RBM38	97	87.850	ENSMMOG00000020051	-	90	71.296	Mola_mola
ENSSBOG00000031053	RBM38	99	92.453	ENSMODG00000016458	RBM38	92	81.193	Monodelphis_domestica
ENSSBOG00000031053	RBM38	92	81.633	ENSMALG00000022327	rbm38	93	56.502	Monopterus_albus
ENSSBOG00000031053	RBM38	93	90.099	ENSMALG00000004680	RBM38	67	76.374	Monopterus_albus
ENSSBOG00000031053	RBM38	100	97.196	MGP_CAROLIEiJ_G0024745	Rbm38	91	93.981	Mus_caroli
ENSSBOG00000031053	RBM38	100	97.196	ENSMUSG00000027510	Rbm38	91	94.444	Mus_musculus
ENSSBOG00000031053	RBM38	100	97.196	MGP_PahariEiJ_G0026186	Rbm38	91	94.907	Mus_pahari
ENSSBOG00000031053	RBM38	100	97.196	MGP_SPRETEiJ_G0025665	Rbm38	91	94.907	Mus_spretus
ENSSBOG00000031053	RBM38	92	98.980	ENSMPUG00000006518	RBM38	93	95.722	Mustela_putorius_furo
ENSSBOG00000031053	RBM38	100	89.815	ENSMLUG00000011140	RBM38	100	89.815	Myotis_lucifugus
ENSSBOG00000031053	RBM38	92	91.000	ENSNBRG00000022545	-	92	67.811	Neolamprologus_brichardi
ENSSBOG00000031053	RBM38	92	85.859	ENSNBRG00000022685	rbm38	91	60.268	Neolamprologus_brichardi
ENSSBOG00000031053	RBM38	93	86.000	ENSMEUG00000005475	-	86	86.087	Notamacropus_eugenii
ENSSBOG00000031053	RBM38	100	100.000	ENSODEG00000007980	RBM38	90	95.370	Octodon_degus
ENSSBOG00000031053	RBM38	92	91.000	ENSONIG00000020324	-	92	67.672	Oreochromis_niloticus
ENSSBOG00000031053	RBM38	92	84.848	ENSONIG00000017073	rbm38	95	56.540	Oreochromis_niloticus
ENSSBOG00000031053	RBM38	99	90.566	ENSOANG00000009259	RBM38	83	80.093	Ornithorhynchus_anatinus
ENSSBOG00000031053	RBM38	88	87.368	ENSORLG00000012154	rbm38	91	54.701	Oryzias_latipes
ENSSBOG00000031053	RBM38	93	89.109	ENSORLG00000027180	-	92	65.665	Oryzias_latipes
ENSSBOG00000031053	RBM38	93	89.109	ENSORLG00020020751	-	92	65.665	Oryzias_latipes_hni
ENSSBOG00000031053	RBM38	91	85.714	ENSORLG00020017871	rbm38	93	55.230	Oryzias_latipes_hni
ENSSBOG00000031053	RBM38	93	89.109	ENSORLG00015017040	-	92	66.524	Oryzias_latipes_hsok
ENSSBOG00000031053	RBM38	91	85.714	ENSORLG00015012606	rbm38	90	58.525	Oryzias_latipes_hsok
ENSSBOG00000031053	RBM38	93	89.109	ENSOMEG00000023912	-	92	64.502	Oryzias_melastigma
ENSSBOG00000031053	RBM38	91	84.694	ENSOMEG00000006805	rbm38	93	54.812	Oryzias_melastigma
ENSSBOG00000031053	RBM38	100	99.074	ENSOGAG00000029136	RBM38	90	97.222	Otolemur_garnettii
ENSSBOG00000031053	RBM38	50	90.741	ENSPPAG00000040327	-	73	91.525	Pan_paniscus
ENSSBOG00000031053	RBM38	100	98.131	ENSPPRG00000009507	RBM38	88	98.131	Panthera_pardus
ENSSBOG00000031053	RBM38	100	99.065	ENSPTRG00000013661	RBM38	98	94.118	Pan_troglodytes
ENSSBOG00000031053	RBM38	92	100.000	ENSPTRG00000045845	-	70	96.875	Pan_troglodytes
ENSSBOG00000031053	RBM38	100	80.374	ENSPANG00000033127	-	92	78.505	Papio_anubis
ENSSBOG00000031053	RBM38	100	100.000	ENSPANG00000020919	-	88	100.000	Papio_anubis
ENSSBOG00000031053	RBM38	95	85.849	ENSPKIG00000025417	rbm38	92	65.198	Paramormyrops_kingsleyae
ENSSBOG00000031053	RBM38	93	92.079	ENSPKIG00000018122	-	100	88.889	Paramormyrops_kingsleyae
ENSSBOG00000031053	RBM38	97	92.308	ENSPSIG00000011649	RBM38	92	80.734	Pelodiscus_sinensis
ENSSBOG00000031053	RBM38	92	84.848	ENSPMGG00000011343	rbm38	94	57.563	Periophthalmus_magnuspinnatus
ENSSBOG00000031053	RBM38	94	83.168	ENSPMGG00000017094	-	92	65.236	Periophthalmus_magnuspinnatus
ENSSBOG00000031053	RBM38	99	92.453	ENSPCIG00000013648	RBM38	92	81.193	Phascolarctos_cinereus
ENSSBOG00000031053	RBM38	88	90.426	ENSPFOG00000011658	rbm38	91	56.838	Poecilia_formosa
ENSSBOG00000031053	RBM38	88	90.426	ENSPLAG00000005218	rbm38	91	56.838	Poecilia_latipinna
ENSSBOG00000031053	RBM38	88	95.745	ENSPLAG00000002500	-	92	67.797	Poecilia_latipinna
ENSSBOG00000031053	RBM38	88	90.426	ENSPMEG00000015770	rbm38	91	56.838	Poecilia_mexicana
ENSSBOG00000031053	RBM38	88	90.426	ENSPREG00000007398	rbm38	91	57.265	Poecilia_reticulata
ENSSBOG00000031053	RBM38	100	99.074	ENSPCOG00000026201	RBM38	89	99.074	Propithecus_coquereli
ENSSBOG00000031053	RBM38	100	64.352	ENSPVAG00000006457	RBM38	91	64.352	Pteropus_vampyrus
ENSSBOG00000031053	RBM38	92	93.939	ENSPNYG00000019727	-	100	90.598	Pundamilia_nyererei
ENSSBOG00000031053	RBM38	85	86.957	ENSPNYG00000021373	rbm38	92	60.090	Pundamilia_nyererei
ENSSBOG00000031053	RBM38	90	91.667	ENSPNAG00000010596	rbm38	88	65.258	Pygocentrus_nattereri
ENSSBOG00000031053	RBM38	93	91.089	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSSBOG00000031053	RBM38	100	97.196	ENSRNOG00000006420	Rbm38	91	93.981	Rattus_norvegicus
ENSSBOG00000031053	RBM38	100	88.785	ENSRROG00000036388	-	89	78.704	Rhinopithecus_roxellana
ENSSBOG00000031053	RBM38	96	89.320	ENSSFOG00015004453	rbm38	92	70.455	Scleropages_formosus
ENSSBOG00000031053	RBM38	92	85.859	ENSSDUG00000022611	rbm38	91	58.798	Seriola_dumerili
ENSSBOG00000031053	RBM38	92	90.000	ENSSDUG00000021082	RBM38	92	67.382	Seriola_dumerili
ENSSBOG00000031053	RBM38	92	90.000	ENSSLDG00000011778	RBM38	92	67.382	Seriola_lalandi_dorsalis
ENSSBOG00000031053	RBM38	92	85.859	ENSSLDG00000010845	rbm38	90	62.963	Seriola_lalandi_dorsalis
ENSSBOG00000031053	RBM38	92	85.859	ENSSPAG00000011113	rbm38	93	57.143	Stegastes_partitus
ENSSBOG00000031053	RBM38	93	89.109	ENSSPAG00000020989	RBM38	91	70.698	Stegastes_partitus
ENSSBOG00000031053	RBM38	100	99.065	ENSSSCG00000007504	RBM38	90	94.907	Sus_scrofa
ENSSBOG00000031053	RBM38	88	93.617	ENSTRUG00000019869	-	92	68.670	Takifugu_rubripes
ENSSBOG00000031053	RBM38	92	85.859	ENSTRUG00000024954	rbm38	91	55.895	Takifugu_rubripes
ENSSBOG00000031053	RBM38	92	91.000	ENSTNIG00000007093	-	97	71.171	Tetraodon_nigroviridis
ENSSBOG00000031053	RBM38	96	93.204	ENSTBEG00000001689	-	55	94.845	Tupaia_belangeri
ENSSBOG00000031053	RBM38	100	99.065	ENSUAMG00000019780	RBM38	90	94.907	Ursus_americanus
ENSSBOG00000031053	RBM38	100	99.065	ENSVVUG00000017246	RBM38	90	94.907	Vulpes_vulpes
ENSSBOG00000031053	RBM38	94	90.099	ENSXETG00000011268	rbm38	99	75.676	Xenopus_tropicalis
ENSSBOG00000031053	RBM38	88	95.745	ENSXCOG00000017324	-	60	79.699	Xiphophorus_couchianus
ENSSBOG00000031053	RBM38	87	91.398	ENSXMAG00000023662	rbm38	91	57.082	Xiphophorus_maculatus