EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000031661 (Gene tree)
Gene ID: 101036265
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 56521 bases
Position: chrJH378214.1:2342969-2399489
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000030840	RRM_1	PF00076.22	1.6e-05	1	1
ENSSBOP00000030834	RRM_1	PF00076.22	0.00011	1	1
ENSSBOP00000030820	RRM_1	PF00076.22	0.00012	1	1
ENSSBOP00000030834	G-patch	PF01585.23	7.5e-13	1	1
ENSSBOP00000030820	G-patch	PF01585.23	7.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000047727	-	375	-	ENSSBOP00000030840	124 (aa)	-	A0A2K6UG22
ENSSBOT00000047707	-	2611	XM_003939040	ENSSBOP00000030820	401 (aa)	XP_003939089	A0A2K6UG05
ENSSBOT00000047721	-	1173	-	ENSSBOP00000030834	390 (aa)	-	A0A2K6UFY1

Gene Model

Click here to download ENSSBOG00000031661's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000031661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000031661	-	100	88.557	ENSSBOG00000023653	-	100	88.557

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000031661	-	100	99.252	ENSG00000134453	RBM17	100	99.528	Homo_sapiens
ENSSBOG00000031661	-	99	83.127	ENSAPOG00000007101	rbm17	99	83.127	Acanthochromis_polyacanthus
ENSSBOG00000031661	-	79	40.594	ENSAPOG00000022094	-	78	40.594	Acanthochromis_polyacanthus
ENSSBOG00000031661	-	100	99.002	ENSAMEG00000002107	RBM17	100	99.002	Ailuropoda_melanoleuca
ENSSBOG00000031661	-	93	89.565	ENSACIG00000006251	rbm17	100	79.167	Amphilophus_citrinellus
ENSSBOG00000031661	-	100	83.047	ENSAOCG00000014892	rbm17	100	83.047	Amphiprion_ocellaris
ENSSBOG00000031661	-	100	83.047	ENSAPEG00000022779	rbm17	100	83.047	Amphiprion_percula
ENSSBOG00000031661	-	91	88.496	ENSATEG00000004406	rbm17	100	79.009	Anabas_testudineus
ENSSBOG00000031661	-	100	95.522	ENSAPLG00000004190	RBM17	100	95.522	Anas_platyrhynchos
ENSSBOG00000031661	-	91	97.345	ENSACAG00000005418	RBM17	99	90.541	Anolis_carolinensis
ENSSBOG00000031661	-	100	99.751	ENSANAG00000030127	RBM17	100	99.751	Aotus_nancymaae
ENSSBOG00000031661	-	97	92.500	ENSANAG00000019330	-	97	94.068	Aotus_nancymaae
ENSSBOG00000031661	-	93	90.435	ENSACLG00000003928	rbm17	100	80.905	Astatotilapia_calliptera
ENSSBOG00000031661	-	92	89.474	ENSAMXG00000005853	rbm17	100	79.059	Astyanax_mexicanus
ENSSBOG00000031661	-	100	97.257	ENSBTAG00000011094	-	100	97.257	Bos_taurus
ENSSBOG00000031661	-	100	98.753	ENSBTAG00000021951	RBM17	100	98.753	Bos_taurus
ENSSBOG00000031661	-	77	36.000	WBGene00010233	F58B3.7	89	33.071	Caenorhabditis_elegans
ENSSBOG00000031661	-	100	99.751	ENSCJAG00000020573	RBM17	100	99.751	Callithrix_jacchus
ENSSBOG00000031661	-	100	99.002	ENSCAFG00000005206	RBM17	100	99.002	Canis_familiaris
ENSSBOG00000031661	-	100	97.436	ENSCAFG00020005420	RBM17	100	97.436	Canis_lupus_dingo
ENSSBOG00000031661	-	100	96.010	ENSCHIG00000019921	-	100	96.010	Capra_hircus
ENSSBOG00000031661	-	100	98.753	ENSCHIG00000023204	-	100	98.753	Capra_hircus
ENSSBOG00000031661	-	100	97.284	ENSTSYG00000001165	RBM17	100	97.284	Carlito_syrichta
ENSSBOG00000031661	-	96	78.075	ENSCAPG00000006275	RBM17	100	82.535	Cavia_aperea
ENSSBOG00000031661	-	100	95.685	ENSCPOG00000005679	RBM17	99	95.685	Cavia_porcellus
ENSSBOG00000031661	-	100	99.751	ENSCCAG00000018655	RBM17	100	99.751	Cebus_capucinus
ENSSBOG00000031661	-	100	99.252	ENSCATG00000041566	RBM17	100	99.252	Cercocebus_atys
ENSSBOG00000031661	-	100	98.025	ENSCLAG00000012195	RBM17	99	98.025	Chinchilla_lanigera
ENSSBOG00000031661	-	100	99.252	ENSCSAG00000013564	RBM17	100	99.252	Chlorocebus_sabaeus
ENSSBOG00000031661	-	92	79.459	ENSCHOG00000005131	RBM17	100	79.459	Choloepus_hoffmanni
ENSSBOG00000031661	-	100	94.527	ENSCPBG00000019836	RBM17	100	94.527	Chrysemys_picta_bellii
ENSSBOG00000031661	-	79	39.604	ENSCING00000019470	-	69	39.604	Ciona_intestinalis
ENSSBOG00000031661	-	85	63.208	ENSCING00000004543	-	98	55.615	Ciona_intestinalis
ENSSBOG00000031661	-	94	60.684	ENSCSAVG00000008782	-	100	45.652	Ciona_savignyi
ENSSBOG00000031661	-	97	90.000	ENSCANG00000023715	-	100	85.204	Colobus_angolensis_palliatus
ENSSBOG00000031661	-	100	99.002	ENSCANG00000030987	RBM17	100	99.002	Colobus_angolensis_palliatus
ENSSBOG00000031661	-	100	98.272	ENSCGRG00001013842	Rbm17	100	98.272	Cricetulus_griseus_chok1gshd
ENSSBOG00000031661	-	93	85.217	ENSCGRG00001009256	-	100	73.580	Cricetulus_griseus_chok1gshd
ENSSBOG00000031661	-	100	98.272	ENSCGRG00000006907	Rbm17	100	98.272	Cricetulus_griseus_crigri
ENSSBOG00000031661	-	100	83.871	ENSCSEG00000018164	rbm17	100	80.049	Cynoglossus_semilaevis
ENSSBOG00000031661	-	94	88.793	ENSCVAG00000002476	rbm17	100	78.626	Cyprinodon_variegatus
ENSSBOG00000031661	-	97	85.000	ENSDARG00000031346	rbm17	100	77.882	Danio_rerio
ENSSBOG00000031661	-	100	98.753	ENSDNOG00000035920	RBM17	100	98.753	Dasypus_novemcinctus
ENSSBOG00000031661	-	82	62.136	FBgn0086683	Spf45	99	36.228	Drosophila_melanogaster
ENSSBOG00000031661	-	93	98.261	ENSETEG00000006642	RBM17	87	96.714	Echinops_telfairi
ENSSBOG00000031661	-	91	56.522	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSSBOG00000031661	-	93	95.652	ENSEASG00005009236	-	100	95.676	Equus_asinus_asinus
ENSSBOG00000031661	-	100	95.443	ENSEASG00005019205	-	100	95.443	Equus_asinus_asinus
ENSSBOG00000031661	-	100	84.615	ENSECAG00000008939	RBM17	100	87.179	Equus_caballus
ENSSBOG00000031661	-	100	88.279	ENSECAG00000001379	-	100	88.279	Equus_caballus
ENSSBOG00000031661	-	86	80.814	ENSEEUG00000013077	RBM17	100	80.814	Erinaceus_europaeus
ENSSBOG00000031661	-	92	88.596	ENSELUG00000006440	rbm17	100	77.315	Esox_lucius
ENSSBOG00000031661	-	100	99.002	ENSFCAG00000031988	RBM17	100	99.002	Felis_catus
ENSSBOG00000031661	-	100	94.514	ENSFALG00000001790	RBM17	100	94.514	Ficedula_albicollis
ENSSBOG00000031661	-	100	98.025	ENSFDAG00000007470	RBM17	100	98.025	Fukomys_damarensis
ENSSBOG00000031661	-	93	89.565	ENSFHEG00000001266	rbm17	100	80.808	Fundulus_heteroclitus
ENSSBOG00000031661	-	99	75.534	ENSGMOG00000008438	rbm17	100	75.534	Gadus_morhua
ENSSBOG00000031661	-	100	95.511	ENSGALG00000006332	RBM17	100	95.511	Gallus_gallus
ENSSBOG00000031661	-	93	87.826	ENSGAFG00000019879	rbm17	100	81.327	Gambusia_affinis
ENSSBOG00000031661	-	97	83.333	ENSGACG00000019174	rbm17	99	81.281	Gasterosteus_aculeatus
ENSSBOG00000031661	-	100	94.527	ENSGAGG00000019906	RBM17	100	94.527	Gopherus_agassizii
ENSSBOG00000031661	-	100	97.581	ENSGGOG00000044184	-	100	97.581	Gorilla_gorilla
ENSSBOG00000031661	-	100	83.538	ENSHBUG00000016624	rbm17	100	83.538	Haplochromis_burtoni
ENSSBOG00000031661	-	100	98.025	ENSHGLG00000011580	RBM17	100	98.025	Heterocephalus_glaber_female
ENSSBOG00000031661	-	93	89.565	ENSHGLG00100010556	-	100	74.619	Heterocephalus_glaber_male
ENSSBOG00000031661	-	100	98.025	ENSHGLG00100010460	RBM17	100	98.025	Heterocephalus_glaber_male
ENSSBOG00000031661	-	90	88.393	ENSHCOG00000010865	rbm17	100	78.043	Hippocampus_comes
ENSSBOG00000031661	-	91	89.381	ENSIPUG00000007699	Rbm17	100	77.283	Ictalurus_punctatus
ENSSBOG00000031661	-	100	98.519	ENSSTOG00000013591	RBM17	100	98.519	Ictidomys_tridecemlineatus
ENSSBOG00000031661	-	100	98.272	ENSJJAG00000022886	Rbm17	100	98.272	Jaculus_jaculus
ENSSBOG00000031661	-	100	73.566	ENSJJAG00000000993	-	100	70.223	Jaculus_jaculus
ENSSBOG00000031661	-	93	90.435	ENSKMAG00000021400	rbm17	100	80.402	Kryptolebias_marmoratus
ENSSBOG00000031661	-	100	82.310	ENSLBEG00000000881	rbm17	100	79.009	Labrus_bergylta
ENSSBOG00000031661	-	91	77.876	ENSLACG00000017297	RBM17	99	68.941	Latimeria_chalumnae
ENSSBOG00000031661	-	100	86.914	ENSLOCG00000015659	rbm17	100	86.914	Lepisosteus_oculatus
ENSSBOG00000031661	-	100	97.789	ENSLAFG00000011629	RBM17	100	97.789	Loxodonta_africana
ENSSBOG00000031661	-	100	99.252	ENSMFAG00000035521	RBM17	100	99.252	Macaca_fascicularis
ENSSBOG00000031661	-	100	99.252	ENSMMUG00000015152	RBM17	100	99.252	Macaca_mulatta
ENSSBOG00000031661	-	100	99.252	ENSMNEG00000017264	RBM17	100	99.252	Macaca_nemestrina
ENSSBOG00000031661	-	100	99.252	ENSMLEG00000029340	RBM17	100	99.252	Mandrillus_leucophaeus
ENSSBOG00000031661	-	93	88.696	ENSMAMG00000000387	rbm17	100	77.830	Mastacembelus_armatus
ENSSBOG00000031661	-	93	90.435	ENSMZEG00005015179	rbm17	100	80.905	Maylandia_zebra
ENSSBOG00000031661	-	100	93.627	ENSMGAG00000003981	RBM17	100	93.627	Meleagris_gallopavo
ENSSBOG00000031661	-	100	98.272	ENSMAUG00000019247	Rbm17	100	98.272	Mesocricetus_auratus
ENSSBOG00000031661	-	100	90.220	ENSMICG00000041489	-	100	90.220	Microcebus_murinus
ENSSBOG00000031661	-	100	97.778	ENSMICG00000003976	-	100	97.778	Microcebus_murinus
ENSSBOG00000031661	-	74	96.739	ENSMICG00000047113	-	72	96.739	Microcebus_murinus
ENSSBOG00000031661	-	100	98.272	ENSMOCG00000011847	Rbm17	100	98.272	Microtus_ochrogaster
ENSSBOG00000031661	-	93	80.267	ENSMOCG00000014517	-	99	80.267	Microtus_ochrogaster
ENSSBOG00000031661	-	100	75.426	ENSMMOG00000010264	rbm17	100	74.209	Mola_mola
ENSSBOG00000031661	-	100	97.756	ENSMODG00000016648	RBM17	100	97.756	Monodelphis_domestica
ENSSBOG00000031661	-	91	88.496	ENSMALG00000010597	rbm17	100	79.442	Monopterus_albus
ENSSBOG00000031661	-	100	98.025	MGP_CAROLIEiJ_G0023173	Rbm17	100	98.025	Mus_caroli
ENSSBOG00000031661	-	100	98.025	ENSMUSG00000037197	Rbm17	100	98.025	Mus_musculus
ENSSBOG00000031661	-	100	97.531	MGP_PahariEiJ_G0019233	Rbm17	100	97.531	Mus_pahari
ENSSBOG00000031661	-	100	98.025	MGP_SPRETEiJ_G0024091	Rbm17	100	98.025	Mus_spretus
ENSSBOG00000031661	-	86	98.555	ENSMPUG00000016359	RBM17	97	98.555	Mustela_putorius_furo
ENSSBOG00000031661	-	100	96.059	ENSMLUG00000002302	-	100	96.059	Myotis_lucifugus
ENSSBOG00000031661	-	100	93.267	ENSMLUG00000025709	-	100	93.267	Myotis_lucifugus
ENSSBOG00000031661	-	100	69.077	ENSNGAG00000000663	-	100	68.657	Nannospalax_galili
ENSSBOG00000031661	-	100	98.272	ENSNGAG00000000741	Rbm17	100	98.272	Nannospalax_galili
ENSSBOG00000031661	-	93	90.435	ENSNBRG00000018148	rbm17	100	79.949	Neolamprologus_brichardi
ENSSBOG00000031661	-	100	99.252	ENSNLEG00000033350	RBM17	100	99.252	Nomascus_leucogenys
ENSSBOG00000031661	-	100	91.771	ENSMEUG00000011347	RBM17	100	91.771	Notamacropus_eugenii
ENSSBOG00000031661	-	100	85.536	ENSOPRG00000002993	RBM17	100	85.536	Ochotona_princeps
ENSSBOG00000031661	-	97	74.555	ENSODEG00000007286	-	99	74.555	Octodon_degus
ENSSBOG00000031661	-	100	97.291	ENSODEG00000004393	RBM17	100	97.291	Octodon_degus
ENSSBOG00000031661	-	100	83.538	ENSONIG00000011838	rbm17	100	83.538	Oreochromis_niloticus
ENSSBOG00000031661	-	100	96.278	ENSOANG00000015455	RBM17	100	96.278	Ornithorhynchus_anatinus
ENSSBOG00000031661	-	93	99.130	ENSOCUG00000004516	-	74	99.138	Oryctolagus_cuniculus
ENSSBOG00000031661	-	93	91.304	ENSORLG00000028798	rbm17	100	80.590	Oryzias_latipes
ENSSBOG00000031661	-	93	91.304	ENSORLG00020004593	rbm17	100	80.964	Oryzias_latipes_hni
ENSSBOG00000031661	-	93	91.304	ENSORLG00015000033	rbm17	100	83.538	Oryzias_latipes_hsok
ENSSBOG00000031661	-	92	91.228	ENSOMEG00000012060	rbm17	100	87.421	Oryzias_melastigma
ENSSBOG00000031661	-	100	97.778	ENSOGAG00000015687	RBM17	100	97.778	Otolemur_garnettii
ENSSBOG00000031661	-	100	98.753	ENSOARG00000012975	RBM17	100	98.753	Ovis_aries
ENSSBOG00000031661	-	100	99.252	ENSPPAG00000032347	RBM17	100	99.252	Pan_paniscus
ENSSBOG00000031661	-	100	99.002	ENSPPRG00000010706	RBM17	100	99.002	Panthera_pardus
ENSSBOG00000031661	-	100	99.002	ENSPTIG00000007596	RBM17	100	99.002	Panthera_tigris_altaica
ENSSBOG00000031661	-	100	99.252	ENSPTRG00000002265	RBM17	100	99.252	Pan_troglodytes
ENSSBOG00000031661	-	100	99.252	ENSPANG00000023425	RBM17	100	99.252	Papio_anubis
ENSSBOG00000031661	-	93	88.696	ENSPKIG00000025526	rbm17	100	80.516	Paramormyrops_kingsleyae
ENSSBOG00000031661	-	92	85.965	ENSPKIG00000005048	-	100	78.987	Paramormyrops_kingsleyae
ENSSBOG00000031661	-	100	93.333	ENSPSIG00000012332	RBM17	100	93.333	Pelodiscus_sinensis
ENSSBOG00000031661	-	93	89.565	ENSPMGG00000007980	rbm17	100	79.250	Periophthalmus_magnuspinnatus
ENSSBOG00000031661	-	100	98.272	ENSPEMG00000014320	Rbm17	100	98.272	Peromyscus_maniculatus_bairdii
ENSSBOG00000031661	-	100	97.519	ENSPCIG00000019260	-	100	97.519	Phascolarctos_cinereus
ENSSBOG00000031661	-	92	90.351	ENSPFOG00000013271	rbm17	100	78.774	Poecilia_formosa
ENSSBOG00000031661	-	92	90.351	ENSPLAG00000004455	rbm17	100	79.949	Poecilia_latipinna
ENSSBOG00000031661	-	92	90.351	ENSPMEG00000014864	rbm17	100	82.064	Poecilia_mexicana
ENSSBOG00000031661	-	92	89.474	ENSPREG00000015589	rbm17	100	79.747	Poecilia_reticulata
ENSSBOG00000031661	-	100	99.252	ENSPPYG00000002067	RBM17	100	99.252	Pongo_abelii
ENSSBOG00000031661	-	99	72.180	ENSPPYG00000019881	-	100	71.930	Pongo_abelii
ENSSBOG00000031661	-	81	71.207	ENSPPYG00000019042	-	100	70.898	Pongo_abelii
ENSSBOG00000031661	-	100	91.022	ENSPCAG00000016879	RBM17	100	91.022	Procavia_capensis
ENSSBOG00000031661	-	100	99.002	ENSPCOG00000027881	RBM17	100	99.002	Propithecus_coquereli
ENSSBOG00000031661	-	100	87.781	ENSPVAG00000015499	RBM17	100	86.284	Pteropus_vampyrus
ENSSBOG00000031661	-	93	90.435	ENSPNYG00000015274	rbm17	100	78.517	Pundamilia_nyererei
ENSSBOG00000031661	-	93	88.696	ENSPNAG00000030046	rbm17	100	79.294	Pygocentrus_nattereri
ENSSBOG00000031661	-	100	98.272	ENSRNOG00000018767	Rbm17	100	98.272	Rattus_norvegicus
ENSSBOG00000031661	-	100	99.252	ENSRBIG00000043727	RBM17	100	99.252	Rhinopithecus_bieti
ENSSBOG00000031661	-	100	99.252	ENSRROG00000044142	RBM17	100	99.252	Rhinopithecus_roxellana
ENSSBOG00000031661	-	100	97.756	ENSSHAG00000012480	-	100	97.756	Sarcophilus_harrisii
ENSSBOG00000031661	-	100	82.310	ENSSFOG00015009892	rbm17	100	82.310	Scleropages_formosus
ENSSBOG00000031661	-	92	90.351	ENSSMAG00000012368	rbm17	100	79.795	Scophthalmus_maximus
ENSSBOG00000031661	-	100	82.082	ENSSDUG00000015015	rbm17	100	82.082	Seriola_dumerili
ENSSBOG00000031661	-	100	82.082	ENSSLDG00000014486	rbm17	100	82.082	Seriola_lalandi_dorsalis
ENSSBOG00000031661	-	59	78.814	ENSSARG00000001792	-	100	78.814	Sorex_araneus
ENSSBOG00000031661	-	99	95.012	ENSSPUG00000001036	RBM17	99	95.012	Sphenodon_punctatus
ENSSBOG00000031661	-	100	82.801	ENSSPAG00000002338	rbm17	100	82.801	Stegastes_partitus
ENSSBOG00000031661	-	100	98.504	ENSSSCG00000011134	RBM17	100	98.504	Sus_scrofa
ENSSBOG00000031661	-	100	93.827	ENSTGUG00000002013	RBM17	100	93.827	Taeniopygia_guttata
ENSSBOG00000031661	-	100	82.759	ENSTRUG00000010698	rbm17	100	82.759	Takifugu_rubripes
ENSSBOG00000031661	-	100	82.641	ENSTNIG00000006892	rbm17	100	82.641	Tetraodon_nigroviridis
ENSSBOG00000031661	-	100	77.307	ENSTBEG00000014686	RBM17	100	77.307	Tupaia_belangeri
ENSSBOG00000031661	-	93	98.261	ENSTTRG00000001344	RBM17	100	98.611	Tursiops_truncatus
ENSSBOG00000031661	-	100	96.684	ENSUAMG00000009499	RBM17	100	96.684	Ursus_americanus
ENSSBOG00000031661	-	100	98.753	ENSUMAG00000012237	RBM17	100	98.753	Ursus_maritimus
ENSSBOG00000031661	-	100	84.289	ENSVPAG00000005497	RBM17	100	84.289	Vicugna_pacos
ENSSBOG00000031661	-	100	97.436	ENSVVUG00000006780	RBM17	100	97.436	Vulpes_vulpes
ENSSBOG00000031661	-	93	93.043	ENSVVUG00000019160	-	99	92.308	Vulpes_vulpes
ENSSBOG00000031661	-	99	86.070	ENSXETG00000018123	rbm17	100	86.070	Xenopus_tropicalis
ENSSBOG00000031661	-	93	87.826	ENSXMAG00000008674	rbm17	100	81.327	Xiphophorus_maculatus