EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000032114 (Gene tree)
Gene ID: 101049285
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 87041 bases
Position: chrJH378138.1:20577143-20664183
Accession: 18398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000031903	ResIII	PF04851.15	2.1e-10	1	1
ENSSBOP00000031883	ResIII	PF04851.15	3.5e-10	1	1
ENSSBOP00000031896	ResIII	PF04851.15	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000048799	SMARCAD1-203	3956	XM_010340148	ENSSBOP00000031903	596 (aa)	XP_010338450	A0A2K6UIY3
ENSSBOT00000048792	SMARCAD1-202	5135	XM_003929544	ENSSBOP00000031896	1026 (aa)	XP_003929593	A0A2K6UIW3
ENSSBOT00000048779	SMARCAD1-201	5750	XM_010340147	ENSSBOP00000031883	1026 (aa)	XP_010338449	A0A2K6UIW3

Gene Model

Click here to download ENSSBOG00000032114's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000032114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000032114	SMARCAD1	84	35.385	ENSSBOG00000022089	CHD6	77	31.158
ENSSBOG00000032114	SMARCAD1	84	33.586	ENSSBOG00000028501	-	54	33.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSG00000163104	SMARCAD1	100	99.664	Homo_sapiens
ENSSBOG00000032114	SMARCAD1	99	67.340	ENSAPOG00000011446	smarcad1a	55	67.340	Acanthochromis_polyacanthus
ENSSBOG00000032114	SMARCAD1	100	98.993	ENSAMEG00000005844	SMARCAD1	100	97.082	Ailuropoda_melanoleuca
ENSSBOG00000032114	SMARCAD1	97	67.703	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSSBOG00000032114	SMARCAD1	99	67.508	ENSAOCG00000019762	smarcad1a	96	62.890	Amphiprion_ocellaris
ENSSBOG00000032114	SMARCAD1	99	67.677	ENSAPEG00000003889	smarcad1a	96	63.031	Amphiprion_percula
ENSSBOG00000032114	SMARCAD1	97	68.631	ENSATEG00000015608	smarcad1a	93	62.781	Anabas_testudineus
ENSSBOG00000032114	SMARCAD1	100	84.925	ENSAPLG00000004630	SMARCAD1	100	72.364	Anas_platyrhynchos
ENSSBOG00000032114	SMARCAD1	100	83.585	ENSACAG00000013554	SMARCAD1	100	70.417	Anolis_carolinensis
ENSSBOG00000032114	SMARCAD1	100	99.497	ENSANAG00000020488	SMARCAD1	100	99.222	Aotus_nancymaae
ENSSBOG00000032114	SMARCAD1	100	67.114	ENSACLG00000017063	smarcad1a	99	61.308	Astatotilapia_calliptera
ENSSBOG00000032114	SMARCAD1	100	65.436	ENSAMXG00000015470	smarcad1a	99	60.362	Astyanax_mexicanus
ENSSBOG00000032114	SMARCAD1	100	68.121	ENSAMXG00000019130	smarcad1b	85	60.025	Astyanax_mexicanus
ENSSBOG00000032114	SMARCAD1	100	97.659	ENSBTAG00000017061	SMARCAD1	100	96.113	Bos_taurus
ENSSBOG00000032114	SMARCAD1	96	44.768	WBGene00010845	M03C11.8	70	40.788	Caenorhabditis_elegans
ENSSBOG00000032114	SMARCAD1	100	99.832	ENSCJAG00000006778	SMARCAD1	100	99.513	Callithrix_jacchus
ENSSBOG00000032114	SMARCAD1	100	98.658	ENSCAFG00000010026	SMARCAD1	100	96.595	Canis_familiaris
ENSSBOG00000032114	SMARCAD1	100	98.658	ENSCAFG00020003994	SMARCAD1	99	97.525	Canis_lupus_dingo
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSCHIG00000012905	SMARCAD1	100	96.595	Capra_hircus
ENSSBOG00000032114	SMARCAD1	100	98.826	ENSTSYG00000002706	SMARCAD1	100	97.468	Carlito_syrichta
ENSSBOG00000032114	SMARCAD1	97	87.175	ENSCAPG00000016744	SMARCAD1	96	78.664	Cavia_aperea
ENSSBOG00000032114	SMARCAD1	100	97.987	ENSCPOG00000011398	SMARCAD1	100	94.477	Cavia_porcellus
ENSSBOG00000032114	SMARCAD1	100	100.000	ENSCCAG00000022264	SMARCAD1	100	100.000	Cebus_capucinus
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSCATG00000035663	SMARCAD1	100	98.830	Cercocebus_atys
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSCSAG00000004186	SMARCAD1	100	99.524	Chlorocebus_sabaeus
ENSSBOG00000032114	SMARCAD1	100	85.260	ENSCPBG00000013203	SMARCAD1	100	74.063	Chrysemys_picta_bellii
ENSSBOG00000032114	SMARCAD1	100	50.415	ENSCING00000001688	-	99	49.700	Ciona_intestinalis
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSCANG00000003556	SMARCAD1	100	99.664	Colobus_angolensis_palliatus
ENSSBOG00000032114	SMARCAD1	100	97.315	ENSCGRG00001015056	Smarcad1	100	93.177	Cricetulus_griseus_chok1gshd
ENSSBOG00000032114	SMARCAD1	100	97.315	ENSCGRG00000014087	Smarcad1	100	93.177	Cricetulus_griseus_crigri
ENSSBOG00000032114	SMARCAD1	100	65.268	ENSCSEG00000014419	-	99	57.503	Cynoglossus_semilaevis
ENSSBOG00000032114	SMARCAD1	100	65.940	ENSCSEG00000017903	smarcad1a	100	46.790	Cynoglossus_semilaevis
ENSSBOG00000032114	SMARCAD1	99	65.825	ENSDARG00000014041	smarcad1a	92	55.678	Danio_rerio
ENSSBOG00000032114	SMARCAD1	100	66.443	ENSDARG00000073721	smarcad1b	82	59.137	Danio_rerio
ENSSBOG00000032114	SMARCAD1	100	97.987	ENSDNOG00000000806	-	100	96.199	Dasypus_novemcinctus
ENSSBOG00000032114	SMARCAD1	100	97.483	ENSDORG00000012331	Smarcad1	100	92.517	Dipodomys_ordii
ENSSBOG00000032114	SMARCAD1	99	46.566	FBgn0032157	Etl1	90	40.319	Drosophila_melanogaster
ENSSBOG00000032114	SMARCAD1	95	48.342	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSSBOG00000032114	SMARCAD1	100	98.826	ENSEASG00005012382	SMARCAD1	100	96.984	Equus_asinus_asinus
ENSSBOG00000032114	SMARCAD1	100	98.826	ENSECAG00000011562	SMARCAD1	100	96.984	Equus_caballus
ENSSBOG00000032114	SMARCAD1	98	65.812	ENSELUG00000019154	smarcad1b	79	58.440	Esox_lucius
ENSSBOG00000032114	SMARCAD1	99	67.340	ENSELUG00000018535	smarcad1a	100	51.625	Esox_lucius
ENSSBOG00000032114	SMARCAD1	100	98.658	ENSFCAG00000003958	SMARCAD1	100	98.658	Felis_catus
ENSSBOG00000032114	SMARCAD1	100	84.255	ENSFALG00000006089	SMARCAD1	100	67.212	Ficedula_albicollis
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSFDAG00000017027	SMARCAD1	100	95.712	Fukomys_damarensis
ENSSBOG00000032114	SMARCAD1	99	67.677	ENSFHEG00000012778	smarcad1a	87	62.622	Fundulus_heteroclitus
ENSSBOG00000032114	SMARCAD1	100	66.499	ENSGMOG00000018995	smarcad1a	97	57.604	Gadus_morhua
ENSSBOG00000032114	SMARCAD1	100	80.067	ENSGALG00000037339	SMARCAD1	94	74.840	Gallus_gallus
ENSSBOG00000032114	SMARCAD1	99	67.003	ENSGAFG00000013498	smarcad1a	60	66.825	Gambusia_affinis
ENSSBOG00000032114	SMARCAD1	99	67.059	ENSGACG00000007327	smarcad1a	99	58.050	Gasterosteus_aculeatus
ENSSBOG00000032114	SMARCAD1	100	85.092	ENSGAGG00000008582	SMARCAD1	100	73.745	Gopherus_agassizii
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSGGOG00000023001	SMARCAD1	100	99.123	Gorilla_gorilla
ENSSBOG00000032114	SMARCAD1	100	66.946	ENSHBUG00000011042	smarcad1a	99	61.172	Haplochromis_burtoni
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSHGLG00000005070	SMARCAD1	100	95.821	Heterocephalus_glaber_female
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSHGLG00100006812	SMARCAD1	100	95.821	Heterocephalus_glaber_male
ENSSBOG00000032114	SMARCAD1	100	64.765	ENSHCOG00000007848	smarcad1a	94	62.613	Hippocampus_comes
ENSSBOG00000032114	SMARCAD1	100	67.282	ENSIPUG00000022817	smarcad1b	99	52.085	Ictalurus_punctatus
ENSSBOG00000032114	SMARCAD1	99	65.825	ENSIPUG00000000242	smarcad1a	93	63.393	Ictalurus_punctatus
ENSSBOG00000032114	SMARCAD1	100	98.658	ENSSTOG00000001227	SMARCAD1	100	97.176	Ictidomys_tridecemlineatus
ENSSBOG00000032114	SMARCAD1	100	98.322	ENSJJAG00000022342	Smarcad1	100	95.809	Jaculus_jaculus
ENSSBOG00000032114	SMARCAD1	98	67.354	ENSKMAG00000021351	smarcad1a	65	61.615	Kryptolebias_marmoratus
ENSSBOG00000032114	SMARCAD1	99	68.013	ENSLBEG00000008088	smarcad1a	89	65.970	Labrus_bergylta
ENSSBOG00000032114	SMARCAD1	100	71.309	ENSLOCG00000012909	smarcad1a	100	55.186	Lepisosteus_oculatus
ENSSBOG00000032114	SMARCAD1	100	95.638	ENSLAFG00000000040	SMARCAD1	100	94.347	Loxodonta_africana
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSMFAG00000042606	SMARCAD1	100	98.928	Macaca_fascicularis
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSMMUG00000022242	SMARCAD1	99	99.437	Macaca_mulatta
ENSSBOG00000032114	SMARCAD1	100	99.497	ENSMNEG00000038117	SMARCAD1	100	99.497	Macaca_nemestrina
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSMLEG00000038333	SMARCAD1	100	99.664	Mandrillus_leucophaeus
ENSSBOG00000032114	SMARCAD1	99	68.350	ENSMAMG00000000933	smarcad1a	92	63.700	Mastacembelus_armatus
ENSSBOG00000032114	SMARCAD1	100	67.114	ENSMZEG00005005203	smarcad1a	100	49.817	Maylandia_zebra
ENSSBOG00000032114	SMARCAD1	100	80.936	ENSMGAG00000005577	SMARCAD1	100	65.123	Meleagris_gallopavo
ENSSBOG00000032114	SMARCAD1	100	97.483	ENSMAUG00000008417	Smarcad1	100	92.982	Mesocricetus_auratus
ENSSBOG00000032114	SMARCAD1	100	98.495	ENSMICG00000009746	SMARCAD1	100	96.599	Microcebus_murinus
ENSSBOG00000032114	SMARCAD1	100	97.315	ENSMOCG00000017142	Smarcad1	100	92.982	Microtus_ochrogaster
ENSSBOG00000032114	SMARCAD1	100	67.282	ENSMMOG00000000275	smarcad1a	92	64.531	Mola_mola
ENSSBOG00000032114	SMARCAD1	100	90.604	ENSMODG00000019268	SMARCAD1	100	81.564	Monodelphis_domestica
ENSSBOG00000032114	SMARCAD1	100	96.141	MGP_CAROLIEiJ_G0028458	-	77	93.625	Mus_caroli
ENSSBOG00000032114	SMARCAD1	100	96.141	ENSMUSG00000029920	Smarcad1	100	92.113	Mus_musculus
ENSSBOG00000032114	SMARCAD1	100	96.644	MGP_PahariEiJ_G0022198	Smarcad1	100	92.405	Mus_pahari
ENSSBOG00000032114	SMARCAD1	100	96.141	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.210	Mus_spretus
ENSSBOG00000032114	SMARCAD1	100	98.826	ENSMPUG00000002111	SMARCAD1	100	97.082	Mustela_putorius_furo
ENSSBOG00000032114	SMARCAD1	100	96.823	ENSMLUG00000000425	SMARCAD1	100	93.191	Myotis_lucifugus
ENSSBOG00000032114	SMARCAD1	100	97.987	ENSNGAG00000000810	Smarcad1	100	93.957	Nannospalax_galili
ENSSBOG00000032114	SMARCAD1	97	67.358	ENSNBRG00000012749	smarcad1a	85	61.367	Neolamprologus_brichardi
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSNLEG00000014225	SMARCAD1	100	99.664	Nomascus_leucogenys
ENSSBOG00000032114	SMARCAD1	100	98.322	ENSODEG00000004334	SMARCAD1	100	94.947	Octodon_degus
ENSSBOG00000032114	SMARCAD1	100	66.611	ENSONIG00000015059	smarcad1a	100	52.413	Oreochromis_niloticus
ENSSBOG00000032114	SMARCAD1	100	89.799	ENSOANG00000013764	SMARCAD1	100	84.783	Ornithorhynchus_anatinus
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSOCUG00000017283	SMARCAD1	100	97.076	Oryctolagus_cuniculus
ENSSBOG00000032114	SMARCAD1	99	66.667	ENSORLG00000004869	smarcad1a	69	61.348	Oryzias_latipes
ENSSBOG00000032114	SMARCAD1	99	66.667	ENSORLG00020020569	smarcad1a	68	60.996	Oryzias_latipes_hni
ENSSBOG00000032114	SMARCAD1	99	66.498	ENSORLG00015009045	smarcad1a	69	61.348	Oryzias_latipes_hsok
ENSSBOG00000032114	SMARCAD1	99	66.667	ENSOMEG00000023032	smarcad1a	69	61.043	Oryzias_melastigma
ENSSBOG00000032114	SMARCAD1	100	97.659	ENSOGAG00000011444	SMARCAD1	100	96.404	Otolemur_garnettii
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSOARG00000017851	SMARCAD1	100	96.498	Ovis_aries
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSPPAG00000035715	SMARCAD1	100	99.220	Pan_paniscus
ENSSBOG00000032114	SMARCAD1	100	98.658	ENSPPRG00000024756	SMARCAD1	100	98.658	Panthera_pardus
ENSSBOG00000032114	SMARCAD1	100	98.328	ENSPTIG00000017868	SMARCAD1	100	96.599	Panthera_tigris_altaica
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSPTRG00000023126	SMARCAD1	100	99.664	Pan_troglodytes
ENSSBOG00000032114	SMARCAD1	100	97.663	ENSPANG00000019757	SMARCAD1	100	97.570	Papio_anubis
ENSSBOG00000032114	SMARCAD1	100	84.255	ENSPSIG00000010255	SMARCAD1	100	73.110	Pelodiscus_sinensis
ENSSBOG00000032114	SMARCAD1	99	65.042	ENSPMGG00000010735	smarcad1a	95	62.870	Periophthalmus_magnuspinnatus
ENSSBOG00000032114	SMARCAD1	100	83.389	ENSPEMG00000001854	Smarcad1	100	78.947	Peromyscus_maniculatus_bairdii
ENSSBOG00000032114	SMARCAD1	99	59.701	ENSPMAG00000003516	smarcad1a	99	46.686	Petromyzon_marinus
ENSSBOG00000032114	SMARCAD1	100	90.772	ENSPCIG00000008137	SMARCAD1	98	89.011	Phascolarctos_cinereus
ENSSBOG00000032114	SMARCAD1	99	67.172	ENSPFOG00000019116	smarcad1a	89	62.570	Poecilia_formosa
ENSSBOG00000032114	SMARCAD1	99	67.003	ENSPLAG00000000108	smarcad1a	89	62.430	Poecilia_latipinna
ENSSBOG00000032114	SMARCAD1	99	67.172	ENSPMEG00000009155	smarcad1a	89	62.570	Poecilia_mexicana
ENSSBOG00000032114	SMARCAD1	99	67.677	ENSPREG00000018185	smarcad1a	94	62.726	Poecilia_reticulata
ENSSBOG00000032114	SMARCAD1	100	98.662	ENSPPYG00000014935	SMARCAD1	100	98.346	Pongo_abelii
ENSSBOG00000032114	SMARCAD1	81	98.542	ENSPCOG00000020478	SMARCAD1	98	88.971	Propithecus_coquereli
ENSSBOG00000032114	SMARCAD1	100	96.321	ENSPVAG00000001760	SMARCAD1	100	95.238	Pteropus_vampyrus
ENSSBOG00000032114	SMARCAD1	97	67.128	ENSPNYG00000010087	smarcad1a	86	60.948	Pundamilia_nyererei
ENSSBOG00000032114	SMARCAD1	99	66.667	ENSPNAG00000001663	smarcad1a	100	50.095	Pygocentrus_nattereri
ENSSBOG00000032114	SMARCAD1	100	68.456	ENSPNAG00000010099	smarcad1b	99	52.663	Pygocentrus_nattereri
ENSSBOG00000032114	SMARCAD1	100	96.812	ENSRNOG00000006391	Smarcad1	100	93.087	Rattus_norvegicus
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSRBIG00000041989	SMARCAD1	100	98.635	Rhinopithecus_bieti
ENSSBOG00000032114	SMARCAD1	100	99.664	ENSRROG00000035309	SMARCAD1	100	98.635	Rhinopithecus_roxellana
ENSSBOG00000032114	SMARCAD1	100	90.940	ENSSHAG00000001279	SMARCAD1	100	82.143	Sarcophilus_harrisii
ENSSBOG00000032114	SMARCAD1	99	68.182	ENSSFOG00015016814	smarcad1b	100	50.602	Scleropages_formosus
ENSSBOG00000032114	SMARCAD1	99	64.538	ENSSFOG00015020909	smarcad1a	100	57.513	Scleropages_formosus
ENSSBOG00000032114	SMARCAD1	99	68.350	ENSSMAG00000001326	smarcad1a	95	64.613	Scophthalmus_maximus
ENSSBOG00000032114	SMARCAD1	99	67.508	ENSSDUG00000022338	smarcad1a	84	62.465	Seriola_dumerili
ENSSBOG00000032114	SMARCAD1	99	67.172	ENSSLDG00000024986	smarcad1a	67	61.634	Seriola_lalandi_dorsalis
ENSSBOG00000032114	SMARCAD1	100	84.757	ENSSPUG00000004633	SMARCAD1	100	84.757	Sphenodon_punctatus
ENSSBOG00000032114	SMARCAD1	99	67.677	ENSSPAG00000001970	smarcad1a	95	63.649	Stegastes_partitus
ENSSBOG00000032114	SMARCAD1	100	98.993	ENSSSCG00000009193	SMARCAD1	100	98.098	Sus_scrofa
ENSSBOG00000032114	SMARCAD1	100	85.260	ENSTGUG00000003127	SMARCAD1	100	78.316	Taeniopygia_guttata
ENSSBOG00000032114	SMARCAD1	99	68.235	ENSTNIG00000017585	smarcad1a	99	56.983	Tetraodon_nigroviridis
ENSSBOG00000032114	SMARCAD1	91	97.421	ENSTBEG00000002789	SMARCAD1	91	97.421	Tupaia_belangeri
ENSSBOG00000032114	SMARCAD1	100	98.325	ENSTTRG00000000226	SMARCAD1	100	95.531	Tursiops_truncatus
ENSSBOG00000032114	SMARCAD1	100	98.826	ENSUAMG00000022262	SMARCAD1	99	97.829	Ursus_americanus
ENSSBOG00000032114	SMARCAD1	100	98.826	ENSUMAG00000004549	SMARCAD1	100	97.079	Ursus_maritimus
ENSSBOG00000032114	SMARCAD1	100	98.490	ENSVVUG00000007271	SMARCAD1	100	97.503	Vulpes_vulpes
ENSSBOG00000032114	SMARCAD1	100	73.244	ENSXETG00000019214	smarcad1	100	65.643	Xenopus_tropicalis
ENSSBOG00000032114	SMARCAD1	99	65.878	ENSXCOG00000005232	smarcad1a	94	53.810	Xiphophorus_couchianus
ENSSBOG00000032114	SMARCAD1	99	66.835	ENSXMAG00000015350	smarcad1a	89	61.958	Xiphophorus_maculatus