EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000032297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 262 bases
Position: chrJH378146.1:7044027-7044288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000032235	LSM	PF01423.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000049134	-	237	-	ENSSBOP00000032235	78 (aa)	-	A0A2K6UK01

Gene Model

Click here to download ENSSBOG00000032297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000032297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000032297	-	86	85.333	ENSSBOG00000036179	-	87	85.333
ENSSBOG00000032297	-	90	69.136	ENSSBOG00000027638	-	91	69.136
ENSSBOG00000032297	-	86	85.333	ENSSBOG00000012868	-	87	85.333
ENSSBOG00000032297	-	74	40.909	ENSSBOG00000021229	-	83	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000032297	-	86	85.333	ENSG00000139343	SNRPF	87	85.333	Homo_sapiens
ENSSBOG00000032297	-	85	82.432	ENSAPOG00000003377	snrpf	59	81.333	Acanthochromis_polyacanthus
ENSSBOG00000032297	-	87	72.368	ENSAMEG00000018718	-	87	73.333	Ailuropoda_melanoleuca
ENSSBOG00000032297	-	85	85.135	ENSAMEG00000002166	-	87	85.135	Ailuropoda_melanoleuca
ENSSBOG00000032297	-	83	82.192	ENSACIG00000013216	snrpf	86	82.192	Amphilophus_citrinellus
ENSSBOG00000032297	-	83	82.192	ENSAOCG00000015108	snrpf	86	82.192	Amphiprion_ocellaris
ENSSBOG00000032297	-	83	82.192	ENSAPEG00000022022	snrpf	86	82.192	Amphiprion_percula
ENSSBOG00000032297	-	83	82.192	ENSATEG00000022625	snrpf	78	82.192	Anabas_testudineus
ENSSBOG00000032297	-	85	83.784	ENSACAG00000014073	SNRPF	85	83.784	Anolis_carolinensis
ENSSBOG00000032297	-	81	78.873	ENSANAG00000020297	-	65	78.873	Aotus_nancymaae
ENSSBOG00000032297	-	86	76.119	ENSANAG00000025860	-	85	76.119	Aotus_nancymaae
ENSSBOG00000032297	-	86	85.333	ENSANAG00000032845	SNRPF	87	85.333	Aotus_nancymaae
ENSSBOG00000032297	-	83	82.192	ENSACLG00000016066	snrpf	86	82.192	Astatotilapia_calliptera
ENSSBOG00000032297	-	86	80.000	ENSAMXG00000007421	snrpf	87	80.000	Astyanax_mexicanus
ENSSBOG00000032297	-	86	85.333	ENSBTAG00000016271	SNRPF	87	85.333	Bos_taurus
ENSSBOG00000032297	-	90	78.205	ENSBTAG00000050012	-	93	78.667	Bos_taurus
ENSSBOG00000032297	-	88	59.740	WBGene00004918	snr-5	85	62.500	Caenorhabditis_elegans
ENSSBOG00000032297	-	86	85.333	ENSCJAG00000002705	-	87	85.333	Callithrix_jacchus
ENSSBOG00000032297	-	86	85.333	ENSCAFG00000006395	-	68	85.333	Canis_familiaris
ENSSBOG00000032297	-	83	76.712	ENSCAFG00000031151	-	85	79.452	Canis_familiaris
ENSSBOG00000032297	-	90	74.359	ENSCAFG00020013161	-	74	81.429	Canis_lupus_dingo
ENSSBOG00000032297	-	83	76.712	ENSCAFG00020010823	-	85	79.452	Canis_lupus_dingo
ENSSBOG00000032297	-	86	78.947	ENSTSYG00000036502	-	87	78.947	Carlito_syrichta
ENSSBOG00000032297	-	94	79.012	ENSTSYG00000031636	-	61	80.822	Carlito_syrichta
ENSSBOG00000032297	-	86	77.778	ENSTSYG00000030635	-	87	77.778	Carlito_syrichta
ENSSBOG00000032297	-	85	85.135	ENSCAPG00000007242	SNRPF	87	85.135	Cavia_aperea
ENSSBOG00000032297	-	86	85.333	ENSCPOG00000013898	SNRPF	87	85.333	Cavia_porcellus
ENSSBOG00000032297	-	100	84.884	ENSCCAG00000017356	-	87	85.333	Cebus_capucinus
ENSSBOG00000032297	-	100	77.907	ENSCCAG00000033627	-	59	78.667	Cebus_capucinus
ENSSBOG00000032297	-	86	85.333	ENSCCAG00000037378	-	87	85.333	Cebus_capucinus
ENSSBOG00000032297	-	86	85.333	ENSCLAG00000007200	SNRPF	87	85.333	Chinchilla_lanigera
ENSSBOG00000032297	-	86	85.333	ENSCSAG00000003602	-	61	85.333	Chlorocebus_sabaeus
ENSSBOG00000032297	-	72	84.375	ENSCHOG00000009392	SNRPF	100	84.375	Choloepus_hoffmanni
ENSSBOG00000032297	-	100	77.907	ENSCPBG00000026463	-	87	78.667	Chrysemys_picta_bellii
ENSSBOG00000032297	-	99	81.176	ENSCPBG00000024287	-	60	81.081	Chrysemys_picta_bellii
ENSSBOG00000032297	-	100	76.744	ENSCPBG00000001985	-	89	77.333	Chrysemys_picta_bellii
ENSSBOG00000032297	-	86	77.333	ENSCPBG00000006227	-	87	77.333	Chrysemys_picta_bellii
ENSSBOG00000032297	-	99	75.294	ENSCSAVG00000007498	-	84	74.324	Ciona_savignyi
ENSSBOG00000032297	-	86	85.333	ENSCGRG00001017100	-	87	85.333	Cricetulus_griseus_chok1gshd
ENSSBOG00000032297	-	86	80.000	ENSCGRG00001008965	-	58	80.000	Cricetulus_griseus_chok1gshd
ENSSBOG00000032297	-	86	85.333	ENSCGRG00000000336	-	87	85.333	Cricetulus_griseus_crigri
ENSSBOG00000032297	-	92	80.000	ENSCGRG00000018878	-	94	80.000	Cricetulus_griseus_crigri
ENSSBOG00000032297	-	86	81.333	ENSCSEG00000004748	snrpf	87	81.333	Cynoglossus_semilaevis
ENSSBOG00000032297	-	85	82.432	ENSCVAG00000000397	snrpf	59	82.432	Cyprinodon_variegatus
ENSSBOG00000032297	-	86	80.519	ENSDARG00000105037	snrpf	88	80.519	Danio_rerio
ENSSBOG00000032297	-	86	72.000	ENSDNOG00000049373	-	65	72.000	Dasypus_novemcinctus
ENSSBOG00000032297	-	86	84.000	ENSDNOG00000048989	-	67	84.000	Dasypus_novemcinctus
ENSSBOG00000032297	-	82	75.000	ENSDORG00000025351	-	100	75.000	Dipodomys_ordii
ENSSBOG00000032297	-	65	81.356	ENSDORG00000029740	-	72	81.356	Dipodomys_ordii
ENSSBOG00000032297	-	97	66.667	FBgn0000426	SmF	83	67.123	Drosophila_melanogaster
ENSSBOG00000032297	-	86	85.333	ENSETEG00000001558	-	87	85.333	Echinops_telfairi
ENSSBOG00000032297	-	95	64.634	ENSEBUG00000001793	-	72	73.134	Eptatretus_burgeri
ENSSBOG00000032297	-	86	85.333	ENSECAG00000019817	SNRPF	61	85.333	Equus_caballus
ENSSBOG00000032297	-	85	85.135	ENSEEUG00000013509	SNRPF	87	85.135	Erinaceus_europaeus
ENSSBOG00000032297	-	86	81.333	ENSELUG00000003121	RUXF	87	81.333	Esox_lucius
ENSSBOG00000032297	-	100	81.395	ENSELUG00000007737	RUXF	86	82.667	Esox_lucius
ENSSBOG00000032297	-	86	85.333	ENSFCAG00000029966	-	87	85.333	Felis_catus
ENSSBOG00000032297	-	86	62.667	ENSFCAG00000021942	-	87	62.667	Felis_catus
ENSSBOG00000032297	-	97	66.667	ENSFCAG00000031148	-	72	64.103	Felis_catus
ENSSBOG00000032297	-	85	85.135	ENSFALG00000010799	SNRPF	86	85.135	Ficedula_albicollis
ENSSBOG00000032297	-	86	85.333	ENSFDAG00000002831	-	87	85.333	Fukomys_damarensis
ENSSBOG00000032297	-	85	82.432	ENSFHEG00000003240	snrpf	65	82.432	Fundulus_heteroclitus
ENSSBOG00000032297	-	85	82.432	ENSGMOG00000007741	snrpf	87	82.432	Gadus_morhua
ENSSBOG00000032297	-	86	85.333	ENSGALG00000011409	SNRPF	87	85.333	Gallus_gallus
ENSSBOG00000032297	-	83	82.192	ENSGAFG00000016187	snrpf	84	82.192	Gambusia_affinis
ENSSBOG00000032297	-	85	81.081	ENSGACG00000020055	snrpf	87	81.081	Gasterosteus_aculeatus
ENSSBOG00000032297	-	67	76.667	ENSGAGG00000011163	-	86	77.551	Gopherus_agassizii
ENSSBOG00000032297	-	85	79.730	ENSGAGG00000012945	-	69	80.000	Gopherus_agassizii
ENSSBOG00000032297	-	78	75.362	ENSGAGG00000014132	-	83	75.362	Gopherus_agassizii
ENSSBOG00000032297	-	91	79.747	ENSGAGG00000022991	-	80	80.882	Gopherus_agassizii
ENSSBOG00000032297	-	69	80.645	ENSGAGG00000020974	-	54	78.125	Gopherus_agassizii
ENSSBOG00000032297	-	97	70.130	ENSGGOG00000039936	-	83	67.647	Gorilla_gorilla
ENSSBOG00000032297	-	86	85.333	ENSGGOG00000001127	-	87	85.333	Gorilla_gorilla
ENSSBOG00000032297	-	91	64.557	ENSGGOG00000039564	-	90	64.000	Gorilla_gorilla
ENSSBOG00000032297	-	86	85.333	ENSHGLG00000009108	SNRPF	87	85.333	Heterocephalus_glaber_female
ENSSBOG00000032297	-	86	84.000	ENSHGLG00000021172	-	87	84.000	Heterocephalus_glaber_female
ENSSBOG00000032297	-	86	84.000	ENSHGLG00100019596	-	87	84.000	Heterocephalus_glaber_male
ENSSBOG00000032297	-	85	85.135	ENSHGLG00100008103	-	87	85.135	Heterocephalus_glaber_male
ENSSBOG00000032297	-	71	72.857	ENSHCOG00000018663	snrpf	55	72.857	Hippocampus_comes
ENSSBOG00000032297	-	86	82.667	ENSIPUG00000018994	snrpf	87	82.667	Ictalurus_punctatus
ENSSBOG00000032297	-	86	85.333	ENSSTOG00000010434	-	87	85.333	Ictidomys_tridecemlineatus
ENSSBOG00000032297	-	76	79.104	ENSJJAG00000004828	-	86	78.571	Jaculus_jaculus
ENSSBOG00000032297	-	86	85.333	ENSJJAG00000011272	-	87	85.333	Jaculus_jaculus
ENSSBOG00000032297	-	100	73.256	ENSJJAG00000010502	-	89	73.333	Jaculus_jaculus
ENSSBOG00000032297	-	100	72.093	ENSJJAG00000004558	-	89	72.000	Jaculus_jaculus
ENSSBOG00000032297	-	86	81.333	ENSKMAG00000013566	snrpf	87	81.333	Kryptolebias_marmoratus
ENSSBOG00000032297	-	86	81.333	ENSLBEG00000008800	snrpf	87	81.333	Labrus_bergylta
ENSSBOG00000032297	-	86	84.000	ENSLACG00000002456	-	64	84.000	Latimeria_chalumnae
ENSSBOG00000032297	-	86	80.000	ENSLOCG00000015744	snrpf	87	80.000	Lepisosteus_oculatus
ENSSBOG00000032297	-	85	85.135	ENSLAFG00000017426	SNRPF	86	85.135	Loxodonta_africana
ENSSBOG00000032297	-	83	80.822	ENSMAMG00000016593	snrpf	86	80.822	Mastacembelus_armatus
ENSSBOG00000032297	-	83	82.192	ENSMZEG00005014701	snrpf	86	82.192	Maylandia_zebra
ENSSBOG00000032297	-	83	84.932	ENSMGAG00000011453	-	66	84.932	Meleagris_gallopavo
ENSSBOG00000032297	-	86	82.667	ENSMAUG00000008799	-	87	82.667	Mesocricetus_auratus
ENSSBOG00000032297	-	96	63.855	ENSMAUG00000010289	-	86	62.500	Mesocricetus_auratus
ENSSBOG00000032297	-	71	84.127	ENSMAUG00000016909	-	85	84.127	Mesocricetus_auratus
ENSSBOG00000032297	-	71	84.127	ENSMAUG00000019737	-	85	84.127	Mesocricetus_auratus
ENSSBOG00000032297	-	86	85.333	ENSMICG00000012153	-	87	85.333	Microcebus_murinus
ENSSBOG00000032297	-	86	80.000	ENSMICG00000030494	-	60	80.000	Microcebus_murinus
ENSSBOG00000032297	-	86	73.333	ENSMOCG00000022166	-	82	73.333	Microtus_ochrogaster
ENSSBOG00000032297	-	74	72.308	ENSMOCG00000020220	-	87	70.149	Microtus_ochrogaster
ENSSBOG00000032297	-	86	85.333	ENSMOCG00000020437	Snrpf	87	85.333	Microtus_ochrogaster
ENSSBOG00000032297	-	85	81.081	ENSMMOG00000007127	snrpf	87	81.081	Mola_mola
ENSSBOG00000032297	-	86	85.333	ENSMODG00000008091	SNRPF	66	85.333	Monodelphis_domestica
ENSSBOG00000032297	-	83	82.192	ENSMALG00000012328	snrpf	86	82.192	Monopterus_albus
ENSSBOG00000032297	-	86	85.333	MGP_CAROLIEiJ_G0015735	-	87	85.333	Mus_caroli
ENSSBOG00000032297	-	86	85.333	ENSMUSG00000020018	Snrpf	87	85.333	Mus_musculus
ENSSBOG00000032297	-	86	85.333	MGP_PahariEiJ_G0031350	Snrpf	87	85.333	Mus_pahari
ENSSBOG00000032297	-	86	85.333	MGP_SPRETEiJ_G0016553	Snrpf	87	85.333	Mus_spretus
ENSSBOG00000032297	-	86	85.333	ENSMPUG00000007176	-	67	85.333	Mustela_putorius_furo
ENSSBOG00000032297	-	86	85.333	ENSMLUG00000027932	-	71	85.333	Myotis_lucifugus
ENSSBOG00000032297	-	86	85.333	ENSMLUG00000026149	-	71	85.333	Myotis_lucifugus
ENSSBOG00000032297	-	85	85.135	ENSMLUG00000013577	-	87	85.135	Myotis_lucifugus
ENSSBOG00000032297	-	86	85.333	ENSMLUG00000029201	-	71	85.333	Myotis_lucifugus
ENSSBOG00000032297	-	100	72.093	ENSMLUG00000026269	-	71	70.667	Myotis_lucifugus
ENSSBOG00000032297	-	86	85.333	ENSNGAG00000024292	-	87	85.333	Nannospalax_galili
ENSSBOG00000032297	-	71	74.603	ENSNGAG00000005851	-	71	75.000	Nannospalax_galili
ENSSBOG00000032297	-	85	82.432	ENSNBRG00000011682	snrpf	76	82.432	Neolamprologus_brichardi
ENSSBOG00000032297	-	85	56.757	ENSMEUG00000000671	SNRPF	87	56.757	Notamacropus_eugenii
ENSSBOG00000032297	-	86	85.333	ENSODEG00000010328	-	87	85.333	Octodon_degus
ENSSBOG00000032297	-	86	84.000	ENSOCUG00000010925	SNRPF	66	84.000	Oryctolagus_cuniculus
ENSSBOG00000032297	-	85	79.730	ENSORLG00020008216	snrpf	87	79.730	Oryzias_latipes_hni
ENSSBOG00000032297	-	85	79.730	ENSORLG00015007418	snrpf	87	79.730	Oryzias_latipes_hsok
ENSSBOG00000032297	-	83	80.822	ENSOMEG00000003018	snrpf	86	80.822	Oryzias_melastigma
ENSSBOG00000032297	-	86	84.000	ENSOGAG00000030323	-	87	84.000	Otolemur_garnettii
ENSSBOG00000032297	-	86	85.333	ENSOARG00000011853	-	65	85.333	Ovis_aries
ENSSBOG00000032297	-	91	68.056	ENSPPAG00000037479	-	91	67.647	Pan_paniscus
ENSSBOG00000032297	-	97	70.130	ENSPPAG00000037544	-	83	67.647	Pan_paniscus
ENSSBOG00000032297	-	86	85.333	ENSPPRG00000005875	-	87	85.333	Panthera_pardus
ENSSBOG00000032297	-	97	65.476	ENSPPRG00000007449	-	77	65.333	Panthera_pardus
ENSSBOG00000032297	-	97	67.857	ENSPTIG00000005117	-	89	65.333	Panthera_tigris_altaica
ENSSBOG00000032297	-	86	85.333	ENSPTIG00000007520	SNRPF	87	85.333	Panthera_tigris_altaica
ENSSBOG00000032297	-	97	70.130	ENSPTRG00000043814	-	83	67.647	Pan_troglodytes
ENSSBOG00000032297	-	91	66.197	ENSPTRG00000047717	-	91	65.672	Pan_troglodytes
ENSSBOG00000032297	-	85	82.432	ENSPKIG00000014784	snrpf	81	82.432	Paramormyrops_kingsleyae
ENSSBOG00000032297	-	85	85.135	ENSPSIG00000016462	SNRPF	86	85.135	Pelodiscus_sinensis
ENSSBOG00000032297	-	85	81.081	ENSPMGG00000023548	snrpf	87	81.081	Periophthalmus_magnuspinnatus
ENSSBOG00000032297	-	86	85.333	ENSPEMG00000023326	Snrpf	87	85.333	Peromyscus_maniculatus_bairdii
ENSSBOG00000032297	-	83	82.192	ENSPLAG00000023932	snrpf	86	82.192	Poecilia_latipinna
ENSSBOG00000032297	-	83	82.192	ENSPMEG00000003377	snrpf	86	82.192	Poecilia_mexicana
ENSSBOG00000032297	-	83	82.192	ENSPREG00000022635	snrpf	84	82.192	Poecilia_reticulata
ENSSBOG00000032297	-	86	85.333	ENSPPYG00000004847	-	87	85.333	Pongo_abelii
ENSSBOG00000032297	-	86	85.333	ENSPCOG00000023833	-	87	85.333	Propithecus_coquereli
ENSSBOG00000032297	-	86	85.333	ENSPVAG00000009036	SNRPF	87	85.333	Pteropus_vampyrus
ENSSBOG00000032297	-	83	82.192	ENSPNYG00000021712	snrpf	86	82.192	Pundamilia_nyererei
ENSSBOG00000032297	-	83	80.822	ENSPNAG00000019117	snrpf	86	80.822	Pygocentrus_nattereri
ENSSBOG00000032297	-	86	85.333	ENSRNOG00000005556	Snrpf	87	85.333	Rattus_norvegicus
ENSSBOG00000032297	-	86	82.667	ENSRBIG00000030414	-	87	82.667	Rhinopithecus_bieti
ENSSBOG00000032297	-	86	82.667	ENSRROG00000021975	-	87	82.667	Rhinopithecus_roxellana
ENSSBOG00000032297	-	79	49.296	YPR182W	SMX3	83	49.296	Saccharomyces_cerevisiae
ENSSBOG00000032297	-	85	85.135	ENSSHAG00000012294	SNRPF	67	85.135	Sarcophilus_harrisii
ENSSBOG00000032297	-	72	81.250	ENSSFOG00015021523	snrpf	96	81.250	Scleropages_formosus
ENSSBOG00000032297	-	86	80.000	ENSSMAG00000005533	snrpf	86	80.000	Scophthalmus_maximus
ENSSBOG00000032297	-	73	81.538	ENSSDUG00000016283	snrpf	77	81.538	Seriola_dumerili
ENSSBOG00000032297	-	86	81.333	ENSSLDG00000005119	snrpf	87	81.333	Seriola_lalandi_dorsalis
ENSSBOG00000032297	-	91	65.000	ENSSLDG00000003885	-	90	64.865	Seriola_lalandi_dorsalis
ENSSBOG00000032297	-	83	84.932	ENSSPUG00000014590	-	86	84.932	Sphenodon_punctatus
ENSSBOG00000032297	-	85	82.432	ENSSPAG00000003283	snrpf	84	82.432	Stegastes_partitus
ENSSBOG00000032297	-	86	85.333	ENSSSCG00000000895	SNRPF	87	85.333	Sus_scrofa
ENSSBOG00000032297	-	64	77.586	ENSTRUG00000014956	snrpf	84	77.586	Takifugu_rubripes
ENSSBOG00000032297	-	86	81.333	ENSTNIG00000012672	snrpf	87	81.333	Tetraodon_nigroviridis
ENSSBOG00000032297	-	86	57.333	ENSTTRG00000006070	SNRPF	87	57.333	Tursiops_truncatus
ENSSBOG00000032297	-	100	73.256	ENSUAMG00000001101	-	88	74.667	Ursus_americanus
ENSSBOG00000032297	-	86	85.333	ENSUAMG00000008176	-	87	85.333	Ursus_americanus
ENSSBOG00000032297	-	86	85.333	ENSUMAG00000003528	-	87	85.333	Ursus_maritimus
ENSSBOG00000032297	-	86	74.667	ENSUMAG00000006177	-	88	74.667	Ursus_maritimus
ENSSBOG00000032297	-	86	85.333	ENSVPAG00000008712	-	87	85.333	Vicugna_pacos
ENSSBOG00000032297	-	90	76.923	ENSVVUG00000023821	-	96	77.333	Vulpes_vulpes
ENSSBOG00000032297	-	85	61.842	ENSXETG00000021630	snrpf	87	61.842	Xenopus_tropicalis
ENSSBOG00000032297	-	83	82.192	ENSXCOG00000013860	snrpf	84	82.192	Xiphophorus_couchianus
ENSSBOG00000032297	-	83	82.192	ENSXMAG00000015448	snrpf	86	82.192	Xiphophorus_maculatus