EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000032780 (Gene tree)
Gene ID: 101036333
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 19910 bases
Position: chrJH378157.1:10554162-10574071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000033207	APOBEC_N	PF08210.11	8.3e-84	1	2
ENSSBOP00000033207	APOBEC_N	PF08210.11	8.3e-84	2	2
ENSSBOP00000033201	APOBEC_N	PF08210.11	3.3e-56	1	1
ENSSBOP00000033199	APOBEC_N	PF08210.11	5.2e-56	1	1
ENSSBOP00000033207	APOBEC_C	PF05240.14	1.7e-59	1	2
ENSSBOP00000033207	APOBEC_C	PF05240.14	1.7e-59	2	2
ENSSBOP00000033201	APOBEC_C	PF05240.14	2e-33	1	1
ENSSBOP00000033199	APOBEC_C	PF05240.14	2.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000050113	-	1326	-	ENSSBOP00000033201	190 (aa)	-	A0A2K6UMT5
ENSSBOT00000050111	-	1326	-	ENSSBOP00000033199	190 (aa)	-	A0A2K6UMP4
ENSSBOT00000050119	-	2534	XM_003932986	ENSSBOP00000033207	304 (aa)	XP_003933035	A0A2K6UMX1

Gene Model

Click here to download ENSSBOG00000032780's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000032780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000032780	-	100	42.051	ENSSBOG00000026566	-	99	42.051
ENSSBOG00000032780	-	94	52.381	ENSSBOG00000018208	-	99	52.381
ENSSBOG00000032780	-	71	41.176	ENSSBOG00000035758	AICDA	83	41.176
ENSSBOG00000032780	-	100	44.030	ENSSBOG00000025673	-	99	44.030
ENSSBOG00000032780	-	99	33.333	ENSSBOG00000028496	APOBEC2	88	33.831
ENSSBOG00000032780	-	95	33.862	ENSSBOG00000030005	APOBEC3H	99	33.862
ENSSBOG00000032780	-	60	44.595	ENSSBOG00000030587	APOBEC1	62	44.595
ENSSBOG00000032780	-	100	50.000	ENSSBOG00000021384	-	98	50.000
ENSSBOG00000032780	-	100	46.448	ENSSBOG00000023468	-	79	45.361
ENSSBOG00000032780	-	98	40.206	ENSSBOG00000029091	-	94	40.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000032780	-	100	69.474	ENSG00000244509	APOBEC3C	100	69.474	Homo_sapiens
ENSSBOG00000032780	-	100	68.421	ENSG00000243811	APOBEC3D	100	68.421	Homo_sapiens
ENSSBOG00000032780	-	100	71.242	ENSG00000128394	APOBEC3F	100	71.242	Homo_sapiens
ENSSBOG00000032780	-	100	87.908	ENSANAG00000030088	-	96	87.908	Aotus_nancymaae
ENSSBOG00000032780	-	83	90.152	ENSCJAG00000015317	-	100	90.152	Callithrix_jacchus
ENSSBOG00000032780	-	94	50.292	ENSCAFG00020002615	-	93	49.432	Canis_lupus_dingo
ENSSBOG00000032780	-	99	53.005	ENSTSYG00000028254	-	99	53.005	Carlito_syrichta
ENSSBOG00000032780	-	99	55.738	ENSTSYG00000030036	-	99	55.738	Carlito_syrichta
ENSSBOG00000032780	-	100	53.684	ENSTSYG00000034260	-	99	53.684	Carlito_syrichta
ENSSBOG00000032780	-	98	91.398	ENSCCAG00000030932	-	88	88.144	Cebus_capucinus
ENSSBOG00000032780	-	100	70.748	ENSCATG00000033502	-	100	68.280	Cercocebus_atys
ENSSBOG00000032780	-	100	66.316	ENSCATG00000043226	APOBEC3C	100	66.316	Cercocebus_atys
ENSSBOG00000032780	-	100	68.421	ENSCSAG00000006402	APOBEC3C	100	68.421	Chlorocebus_sabaeus
ENSSBOG00000032780	-	100	71.242	ENSCSAG00000006382	APOBEC3F	100	70.430	Chlorocebus_sabaeus
ENSSBOG00000032780	-	100	65.789	ENSCANG00000039177	APOBEC3C	100	65.789	Colobus_angolensis_palliatus
ENSSBOG00000032780	-	100	66.340	ENSCANG00000033269	-	98	67.582	Colobus_angolensis_palliatus
ENSSBOG00000032780	-	100	68.954	ENSCANG00000031957	-	100	68.954	Colobus_angolensis_palliatus
ENSSBOG00000032780	-	100	70.261	ENSCANG00000032904	-	100	69.892	Colobus_angolensis_palliatus
ENSSBOG00000032780	-	96	39.459	ENSDNOG00000044642	-	99	39.459	Dasypus_novemcinctus
ENSSBOG00000032780	-	100	47.059	ENSEASG00005018641	-	100	47.059	Equus_asinus_asinus
ENSSBOG00000032780	-	100	49.730	ENSECAG00000006071	-	100	50.000	Equus_caballus
ENSSBOG00000032780	-	100	70.915	ENSGGOG00000038678	APOBEC3F	100	70.915	Gorilla_gorilla
ENSSBOG00000032780	-	100	68.421	ENSGGOG00000036587	-	100	68.421	Gorilla_gorilla
ENSSBOG00000032780	-	100	44.865	ENSHGLG00000017315	-	87	44.865	Heterocephalus_glaber_female
ENSSBOG00000032780	-	100	44.624	ENSHGLG00100003105	-	93	44.624	Heterocephalus_glaber_male
ENSSBOG00000032780	-	100	70.261	ENSMFAG00000002331	-	99	70.261	Macaca_fascicularis
ENSSBOG00000032780	-	100	70.261	ENSMFAG00000004037	APOBEC3F	100	70.261	Macaca_fascicularis
ENSSBOG00000032780	-	100	65.789	ENSMFAG00000016792	APOBEC3C	100	65.789	Macaca_fascicularis
ENSSBOG00000032780	-	100	70.588	ENSMMUG00000004017	APOBEC3F	99	70.588	Macaca_mulatta
ENSSBOG00000032780	-	99	64.324	ENSMMUG00000004018	APOBEC3C	95	64.865	Macaca_mulatta
ENSSBOG00000032780	-	100	69.608	ENSMNEG00000043316	APOBEC3D	99	69.608	Macaca_nemestrina
ENSSBOG00000032780	-	100	66.316	ENSMNEG00000045196	APOBEC3C	100	66.316	Macaca_nemestrina
ENSSBOG00000032780	-	100	70.588	ENSMLEG00000029642	APOBEC3F	100	70.588	Mandrillus_leucophaeus
ENSSBOG00000032780	-	100	66.842	ENSMLEG00000036992	APOBEC3C	100	66.842	Mandrillus_leucophaeus
ENSSBOG00000032780	-	99	53.723	ENSMICG00000042615	-	89	53.723	Microcebus_murinus
ENSSBOG00000032780	-	97	49.215	ENSMLUG00000023676	-	99	49.215	Myotis_lucifugus
ENSSBOG00000032780	-	100	65.789	ENSNLEG00000028392	APOBEC3C	100	65.789	Nomascus_leucogenys
ENSSBOG00000032780	-	100	65.359	ENSNLEG00000035811	-	99	65.359	Nomascus_leucogenys
ENSSBOG00000032780	-	98	49.462	ENSOGAG00000032498	-	99	49.462	Otolemur_garnettii
ENSSBOG00000032780	-	99	45.455	ENSOGAG00000030300	-	98	45.455	Otolemur_garnettii
ENSSBOG00000032780	-	99	46.369	ENSOGAG00000033404	-	100	46.369	Otolemur_garnettii
ENSSBOG00000032780	-	100	69.474	ENSPPAG00000014118	APOBEC3C	100	69.474	Pan_paniscus
ENSSBOG00000032780	-	100	65.263	ENSPPAG00000028218	-	100	65.263	Pan_paniscus
ENSSBOG00000032780	-	99	49.730	ENSPPRG00000003726	-	99	50.267	Panthera_pardus
ENSSBOG00000032780	-	100	65.789	ENSPTRG00000041588	APOBEC3D	100	65.789	Pan_troglodytes
ENSSBOG00000032780	-	100	70.915	ENSPTRG00000014385	APOBEC3C	100	70.915	Pan_troglodytes
ENSSBOG00000032780	-	100	68.627	ENSPANG00000010775	APOBEC3F	100	68.627	Papio_anubis
ENSSBOG00000032780	-	100	68.421	ENSPPYG00000011832	APOBEC3C	100	68.421	Pongo_abelii
ENSSBOG00000032780	-	80	60.000	ENSPCOG00000022067	-	95	60.000	Propithecus_coquereli
ENSSBOG00000032780	-	80	62.698	ENSPCOG00000018072	-	95	62.698	Propithecus_coquereli
ENSSBOG00000032780	-	95	51.695	ENSPVAG00000009461	-	73	51.695	Pteropus_vampyrus
ENSSBOG00000032780	-	100	70.588	ENSRBIG00000030323	-	100	70.588	Rhinopithecus_bieti
ENSSBOG00000032780	-	100	69.892	ENSRBIG00000030834	-	100	69.892	Rhinopithecus_bieti
ENSSBOG00000032780	-	100	69.444	ENSRBIG00000042297	-	99	69.444	Rhinopithecus_bieti
ENSSBOG00000032780	-	100	70.261	ENSRROG00000029045	APOBEC3C	100	70.261	Rhinopithecus_roxellana
ENSSBOG00000032780	-	100	71.895	ENSRROG00000028557	-	99	71.895	Rhinopithecus_roxellana
ENSSBOG00000032780	-	100	69.444	ENSRROG00000029996	-	99	69.444	Rhinopithecus_roxellana
ENSSBOG00000032780	-	96	46.703	ENSUAMG00000004433	-	100	46.703	Ursus_americanus
ENSSBOG00000032780	-	97	47.027	ENSUMAG00000014441	-	86	47.027	Ursus_maritimus
ENSSBOG00000032780	-	78	56.667	ENSVVUG00000014628	-	91	53.425	Vulpes_vulpes