EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000032787 (Gene tree)
Gene ID: 101027915
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 28670 bases
Position: chrJH378107.1:6114636-6143305
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000033244	zf-C3HC	PF07967.13	2.7e-20	1	1
ENSSBOP00000033240	zf-C3HC	PF07967.13	5.5e-20	1	1
ENSSBOP00000033256	zf-C3HC	PF07967.13	1.9e-15	1	1
ENSSBOP00000033240	Rsm1	PF08600.10	2.4e-15	1	1
ENSSBOP00000033256	Rsm1	PF08600.10	2.6e-15	1	1
ENSSBOP00000033244	Rsm1	PF08600.10	1.4e-14	1	1
ENSSBOP00000033261	Rsm1	PF08600.10	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000050157	ZC3HC1-202	1083	-	ENSSBOP00000033244	360 (aa)	-	A0A2K6UMT6
ENSSBOT00000050174	ZC3HC1-204	627	-	ENSSBOP00000033261	208 (aa)	-	A0A2K6UMZ6
ENSSBOT00000050152	ZC3HC1-201	1296	XM_003921295	ENSSBOP00000033240	431 (aa)	XP_003921344	A0A2K6UMV3
ENSSBOT00000050170	ZC3HC1-203	1317	-	ENSSBOP00000033256	438 (aa)	-	A0A2K6UMZ1

Gene Model

Click here to download ENSSBOG00000032787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000032787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000032787	ZC3HC1	98	96.569	ENSG00000091732	ZC3HC1	100	93.878	Homo_sapiens
ENSSBOG00000032787	ZC3HC1	94	54.310	ENSAPOG00000009078	zc3hc1	81	54.310	Acanthochromis_polyacanthus
ENSSBOG00000032787	ZC3HC1	100	89.855	ENSAMEG00000005425	ZC3HC1	88	89.855	Ailuropoda_melanoleuca
ENSSBOG00000032787	ZC3HC1	90	38.824	ENSACIG00000019513	zc3hc1	81	49.573	Amphilophus_citrinellus
ENSSBOG00000032787	ZC3HC1	94	54.386	ENSAOCG00000024310	zc3hc1	77	54.386	Amphiprion_ocellaris
ENSSBOG00000032787	ZC3HC1	94	54.386	ENSAPEG00000004907	zc3hc1	77	54.386	Amphiprion_percula
ENSSBOG00000032787	ZC3HC1	78	71.429	ENSATEG00000016898	zc3hc1	70	71.429	Anabas_testudineus
ENSSBOG00000032787	ZC3HC1	86	73.333	ENSAPLG00000003832	ZC3HC1	83	77.922	Anas_platyrhynchos
ENSSBOG00000032787	ZC3HC1	95	61.722	ENSACAG00000001638	ZC3HC1	85	65.546	Anolis_carolinensis
ENSSBOG00000032787	ZC3HC1	100	98.558	ENSANAG00000022213	ZC3HC1	100	98.558	Aotus_nancymaae
ENSSBOG00000032787	ZC3HC1	90	37.916	ENSACLG00000025033	zc3hc1	79	71.429	Astatotilapia_calliptera
ENSSBOG00000032787	ZC3HC1	93	56.637	ENSAMXG00000036792	zc3hc1	78	56.637	Astyanax_mexicanus
ENSSBOG00000032787	ZC3HC1	100	88.525	ENSBTAG00000011247	ZC3HC1	88	88.525	Bos_taurus
ENSSBOG00000032787	ZC3HC1	100	98.077	ENSCJAG00000010536	ZC3HC1	100	98.077	Callithrix_jacchus
ENSSBOG00000032787	ZC3HC1	100	89.706	ENSCAFG00000031850	-	88	89.706	Canis_familiaris
ENSSBOG00000032787	ZC3HC1	100	89.508	ENSCAFG00000001499	-	87	89.508	Canis_familiaris
ENSSBOG00000032787	ZC3HC1	100	90.441	ENSCAFG00000029401	-	87	90.441	Canis_familiaris
ENSSBOG00000032787	ZC3HC1	100	90.441	ENSCAFG00000028735	-	88	90.441	Canis_familiaris
ENSSBOG00000032787	ZC3HC1	100	89.706	ENSCAFG00020006829	-	88	89.706	Canis_lupus_dingo
ENSSBOG00000032787	ZC3HC1	100	89.508	ENSCAFG00020023333	-	88	89.508	Canis_lupus_dingo
ENSSBOG00000032787	ZC3HC1	96	90.000	ENSCHIG00000014103	ZC3HC1	100	72.892	Capra_hircus
ENSSBOG00000032787	ZC3HC1	100	91.912	ENSTSYG00000002843	ZC3HC1	88	91.912	Carlito_syrichta
ENSSBOG00000032787	ZC3HC1	96	82.000	ENSCAPG00000016300	ZC3HC1	100	68.137	Cavia_aperea
ENSSBOG00000032787	ZC3HC1	96	82.500	ENSCPOG00000014034	ZC3HC1	100	67.928	Cavia_porcellus
ENSSBOG00000032787	ZC3HC1	100	99.038	ENSCCAG00000020384	ZC3HC1	100	99.038	Cebus_capucinus
ENSSBOG00000032787	ZC3HC1	100	94.853	ENSCATG00000023130	ZC3HC1	88	94.853	Cercocebus_atys
ENSSBOG00000032787	ZC3HC1	96	85.000	ENSCLAG00000008260	ZC3HC1	100	61.884	Chinchilla_lanigera
ENSSBOG00000032787	ZC3HC1	99	96.098	ENSCSAG00000009881	ZC3HC1	81	94.426	Chlorocebus_sabaeus
ENSSBOG00000032787	ZC3HC1	97	88.725	ENSCHOG00000011846	ZC3HC1	98	77.477	Choloepus_hoffmanni
ENSSBOG00000032787	ZC3HC1	96	70.339	ENSCPBG00000017519	ZC3HC1	88	66.912	Chrysemys_picta_bellii
ENSSBOG00000032787	ZC3HC1	100	97.596	ENSCANG00000029091	ZC3HC1	100	97.596	Colobus_angolensis_palliatus
ENSSBOG00000032787	ZC3HC1	99	88.293	ENSCGRG00001018805	Zc3hc1	88	84.918	Cricetulus_griseus_chok1gshd
ENSSBOG00000032787	ZC3HC1	99	88.293	ENSCGRG00000017114	Zc3hc1	91	76.316	Cricetulus_griseus_crigri
ENSSBOG00000032787	ZC3HC1	95	50.000	ENSCSEG00000009284	zc3hc1	77	50.000	Cynoglossus_semilaevis
ENSSBOG00000032787	ZC3HC1	93	48.214	ENSCVAG00000011566	zc3hc1	80	48.214	Cyprinodon_variegatus
ENSSBOG00000032787	ZC3HC1	94	52.174	ENSDARG00000062651	zc3hc1	81	52.174	Danio_rerio
ENSSBOG00000032787	ZC3HC1	99	88.995	ENSDNOG00000045016	ZC3HC1	81	86.765	Dasypus_novemcinctus
ENSSBOG00000032787	ZC3HC1	99	83.902	ENSDORG00000008697	Zc3hc1	100	67.442	Dipodomys_ordii
ENSSBOG00000032787	ZC3HC1	99	90.244	ENSEASG00005008789	ZC3HC1	84	89.836	Equus_asinus_asinus
ENSSBOG00000032787	ZC3HC1	100	89.508	ENSECAG00000017886	ZC3HC1	88	89.508	Equus_caballus
ENSSBOG00000032787	ZC3HC1	80	85.185	ENSEEUG00000003123	ZC3HC1	69	85.185	Erinaceus_europaeus
ENSSBOG00000032787	ZC3HC1	93	36.605	ENSELUG00000023168	zc3hc1	88	38.478	Esox_lucius
ENSSBOG00000032787	ZC3HC1	100	90.441	ENSFCAG00000010429	ZC3HC1	88	90.441	Felis_catus
ENSSBOG00000032787	ZC3HC1	92	61.000	ENSFALG00000005006	ZC3HC1	88	63.158	Ficedula_albicollis
ENSSBOG00000032787	ZC3HC1	96	86.000	ENSFDAG00000019897	ZC3HC1	100	75.439	Fukomys_damarensis
ENSSBOG00000032787	ZC3HC1	94	45.714	ENSFHEG00000020149	zc3hc1	88	45.390	Fundulus_heteroclitus
ENSSBOG00000032787	ZC3HC1	93	49.541	ENSGMOG00000002914	zc3hc1	82	49.541	Gadus_morhua
ENSSBOG00000032787	ZC3HC1	90	65.079	ENSGALG00000008003	ZC3HC1	99	45.020	Gallus_gallus
ENSSBOG00000032787	ZC3HC1	94	48.246	ENSGAFG00000016095	zc3hc1	81	48.246	Gambusia_affinis
ENSSBOG00000032787	ZC3HC1	92	51.376	ENSGACG00000019706	zc3hc1	80	51.376	Gasterosteus_aculeatus
ENSSBOG00000032787	ZC3HC1	98	64.563	ENSGAGG00000016106	ZC3HC1	100	58.312	Gopherus_agassizii
ENSSBOG00000032787	ZC3HC1	99	98.551	ENSGGOG00000015504	ZC3HC1	99	98.551	Gorilla_gorilla
ENSSBOG00000032787	ZC3HC1	91	40.000	ENSHBUG00000008347	zc3hc1	80	53.043	Haplochromis_burtoni
ENSSBOG00000032787	ZC3HC1	99	88.095	ENSHGLG00000005085	ZC3HC1	86	88.095	Heterocephalus_glaber_female
ENSSBOG00000032787	ZC3HC1	99	87.755	ENSHGLG00100011395	ZC3HC1	86	87.755	Heterocephalus_glaber_male
ENSSBOG00000032787	ZC3HC1	94	35.583	ENSHCOG00000014309	zc3hc1	84	50.394	Hippocampus_comes
ENSSBOG00000032787	ZC3HC1	96	94.000	ENSSTOG00000023599	-	95	85.294	Ictidomys_tridecemlineatus
ENSSBOG00000032787	ZC3HC1	91	50.459	ENSKMAG00000015315	zc3hc1	74	50.459	Kryptolebias_marmoratus
ENSSBOG00000032787	ZC3HC1	84	62.069	ENSLBEG00000017325	zc3hc1	80	70.000	Labrus_bergylta
ENSSBOG00000032787	ZC3HC1	76	52.632	ENSLACG00000013032	ZC3HC1	86	45.580	Latimeria_chalumnae
ENSSBOG00000032787	ZC3HC1	99	51.656	ENSLOCG00000015963	zc3hc1	80	53.676	Lepisosteus_oculatus
ENSSBOG00000032787	ZC3HC1	100	88.406	ENSLAFG00000001292	ZC3HC1	88	88.406	Loxodonta_africana
ENSSBOG00000032787	ZC3HC1	99	96.098	ENSMFAG00000030176	ZC3HC1	88	94.853	Macaca_fascicularis
ENSSBOG00000032787	ZC3HC1	99	96.098	ENSMMUG00000006155	ZC3HC1	88	94.426	Macaca_mulatta
ENSSBOG00000032787	ZC3HC1	99	96.585	ENSMNEG00000011833	ZC3HC1	100	97.170	Macaca_nemestrina
ENSSBOG00000032787	ZC3HC1	100	98.077	ENSMLEG00000027328	ZC3HC1	100	98.077	Mandrillus_leucophaeus
ENSSBOG00000032787	ZC3HC1	92	53.211	ENSMAMG00000010691	zc3hc1	81	51.724	Mastacembelus_armatus
ENSSBOG00000032787	ZC3HC1	91	40.000	ENSMZEG00005007142	zc3hc1	80	53.043	Maylandia_zebra
ENSSBOG00000032787	ZC3HC1	95	62.000	ENSMGAG00000002977	ZC3HC1	85	61.429	Meleagris_gallopavo
ENSSBOG00000032787	ZC3HC1	99	85.854	ENSMAUG00000017032	Zc3hc1	77	91.111	Mesocricetus_auratus
ENSSBOG00000032787	ZC3HC1	100	91.176	ENSMICG00000009167	ZC3HC1	88	91.176	Microcebus_murinus
ENSSBOG00000032787	ZC3HC1	100	83.934	ENSMOCG00000015239	Zc3hc1	88	83.934	Microtus_ochrogaster
ENSSBOG00000032787	ZC3HC1	82	71.212	ENSMMOG00000002204	zc3hc1	81	71.212	Mola_mola
ENSSBOG00000032787	ZC3HC1	99	73.171	ENSMODG00000014630	ZC3HC1	100	61.474	Monodelphis_domestica
ENSSBOG00000032787	ZC3HC1	93	51.261	ENSMALG00000014447	zc3hc1	75	53.333	Monopterus_albus
ENSSBOG00000032787	ZC3HC1	99	86.829	MGP_CAROLIEiJ_G0028183	Zc3hc1	93	76.316	Mus_caroli
ENSSBOG00000032787	ZC3HC1	99	86.341	ENSMUSG00000039130	Zc3hc1	93	76.316	Mus_musculus
ENSSBOG00000032787	ZC3HC1	99	84.878	MGP_PahariEiJ_G0021941	Zc3hc1	100	74.895	Mus_pahari
ENSSBOG00000032787	ZC3HC1	99	85.854	MGP_SPRETEiJ_G0029183	Zc3hc1	100	67.331	Mus_spretus
ENSSBOG00000032787	ZC3HC1	95	88.971	ENSMPUG00000005297	ZC3HC1	83	88.971	Mustela_putorius_furo
ENSSBOG00000032787	ZC3HC1	98	81.643	ENSMLUG00000029228	-	91	82.484	Myotis_lucifugus
ENSSBOG00000032787	ZC3HC1	100	87.681	ENSMLUG00000000063	-	88	87.681	Myotis_lucifugus
ENSSBOG00000032787	ZC3HC1	99	89.320	ENSNGAG00000019014	Zc3hc1	100	70.179	Nannospalax_galili
ENSSBOG00000032787	ZC3HC1	91	40.476	ENSNBRG00000004577	zc3hc1	79	53.043	Neolamprologus_brichardi
ENSSBOG00000032787	ZC3HC1	98	95.098	ENSNLEG00000012698	ZC3HC1	88	94.079	Nomascus_leucogenys
ENSSBOG00000032787	ZC3HC1	98	81.250	ENSMEUG00000011023	ZC3HC1	86	81.250	Notamacropus_eugenii
ENSSBOG00000032787	ZC3HC1	71	77.941	ENSOPRG00000007867	-	55	77.941	Ochotona_princeps
ENSSBOG00000032787	ZC3HC1	96	83.000	ENSODEG00000014604	ZC3HC1	100	69.323	Octodon_degus
ENSSBOG00000032787	ZC3HC1	90	38.581	ENSONIG00000011644	zc3hc1	80	53.913	Oreochromis_niloticus
ENSSBOG00000032787	ZC3HC1	93	73.333	ENSOANG00000011460	ZC3HC1	83	77.778	Ornithorhynchus_anatinus
ENSSBOG00000032787	ZC3HC1	100	84.590	ENSOCUG00000017137	ZC3HC1	88	84.590	Oryctolagus_cuniculus
ENSSBOG00000032787	ZC3HC1	92	39.286	ENSORLG00000014409	zc3hc1	74	51.304	Oryzias_latipes
ENSSBOG00000032787	ZC3HC1	92	40.698	ENSORLG00020015874	zc3hc1	74	51.304	Oryzias_latipes_hni
ENSSBOG00000032787	ZC3HC1	90	37.802	ENSORLG00015014641	zc3hc1	74	51.304	Oryzias_latipes_hsok
ENSSBOG00000032787	ZC3HC1	94	35.950	ENSOMEG00000000215	zc3hc1	74	53.043	Oryzias_melastigma
ENSSBOG00000032787	ZC3HC1	93	40.594	ENSOMEG00000020604	zc3hc1	74	53.043	Oryzias_melastigma
ENSSBOG00000032787	ZC3HC1	100	91.475	ENSOGAG00000026193	ZC3HC1	88	91.475	Otolemur_garnettii
ENSSBOG00000032787	ZC3HC1	100	88.852	ENSOARG00000004907	ZC3HC1	87	88.852	Ovis_aries
ENSSBOG00000032787	ZC3HC1	99	98.551	ENSPPAG00000043172	ZC3HC1	99	98.551	Pan_paniscus
ENSSBOG00000032787	ZC3HC1	100	90.441	ENSPPRG00000001004	ZC3HC1	88	90.441	Panthera_pardus
ENSSBOG00000032787	ZC3HC1	100	90.441	ENSPTIG00000007823	ZC3HC1	88	90.441	Panthera_tigris_altaica
ENSSBOG00000032787	ZC3HC1	99	98.551	ENSPTRG00000019685	ZC3HC1	99	98.551	Pan_troglodytes
ENSSBOG00000032787	ZC3HC1	100	98.077	ENSPANG00000014229	ZC3HC1	100	98.077	Papio_anubis
ENSSBOG00000032787	ZC3HC1	94	57.391	ENSPKIG00000007172	zc3hc1	74	57.391	Paramormyrops_kingsleyae
ENSSBOG00000032787	ZC3HC1	92	74.757	ENSPSIG00000016646	ZC3HC1	82	61.871	Pelodiscus_sinensis
ENSSBOG00000032787	ZC3HC1	93	49.138	ENSPMGG00000003548	zc3hc1	94	33.881	Periophthalmus_magnuspinnatus
ENSSBOG00000032787	ZC3HC1	96	86.000	ENSPEMG00000000514	Zc3hc1	100	68.526	Peromyscus_maniculatus_bairdii
ENSSBOG00000032787	ZC3HC1	99	74.146	ENSPCIG00000020619	ZC3HC1	84	95.652	Phascolarctos_cinereus
ENSSBOG00000032787	ZC3HC1	94	50.000	ENSPFOG00000003466	zc3hc1	95	36.735	Poecilia_formosa
ENSSBOG00000032787	ZC3HC1	94	48.718	ENSPLAG00000022211	zc3hc1	81	48.718	Poecilia_latipinna
ENSSBOG00000032787	ZC3HC1	78	71.429	ENSPMEG00000001458	zc3hc1	73	71.429	Poecilia_mexicana
ENSSBOG00000032787	ZC3HC1	94	47.863	ENSPREG00000004004	zc3hc1	95	36.345	Poecilia_reticulata
ENSSBOG00000032787	ZC3HC1	99	92.787	ENSPPYG00000017998	ZC3HC1	99	89.301	Pongo_abelii
ENSSBOG00000032787	ZC3HC1	98	87.379	ENSPCAG00000001182	ZC3HC1	97	73.318	Procavia_capensis
ENSSBOG00000032787	ZC3HC1	100	92.131	ENSPCOG00000017354	ZC3HC1	88	92.131	Propithecus_coquereli
ENSSBOG00000032787	ZC3HC1	99	88.780	ENSPVAG00000003195	ZC3HC1	82	86.765	Pteropus_vampyrus
ENSSBOG00000032787	ZC3HC1	91	40.000	ENSPNYG00000020692	zc3hc1	80	53.043	Pundamilia_nyererei
ENSSBOG00000032787	ZC3HC1	92	55.046	ENSPNAG00000020746	zc3hc1	77	55.046	Pygocentrus_nattereri
ENSSBOG00000032787	ZC3HC1	96	86.500	ENSRNOG00000010154	Zc3hc1	93	74.561	Rattus_norvegicus
ENSSBOG00000032787	ZC3HC1	100	97.115	ENSRBIG00000029409	ZC3HC1	100	97.115	Rhinopithecus_bieti
ENSSBOG00000032787	ZC3HC1	100	97.115	ENSRROG00000041831	ZC3HC1	100	97.115	Rhinopithecus_roxellana
ENSSBOG00000032787	ZC3HC1	99	74.146	ENSSHAG00000002529	ZC3HC1	86	80.851	Sarcophilus_harrisii
ENSSBOG00000032787	ZC3HC1	94	50.000	ENSSFOG00015003667	zc3hc1	82	42.529	Scleropages_formosus
ENSSBOG00000032787	ZC3HC1	95	34.531	ENSSMAG00000000647	zc3hc1	74	49.593	Scophthalmus_maximus
ENSSBOG00000032787	ZC3HC1	94	52.991	ENSSDUG00000004241	zc3hc1	75	52.991	Seriola_dumerili
ENSSBOG00000032787	ZC3HC1	94	51.754	ENSSLDG00000025056	zc3hc1	75	51.754	Seriola_lalandi_dorsalis
ENSSBOG00000032787	ZC3HC1	99	85.185	ENSSARG00000012013	ZC3HC1	86	85.185	Sorex_araneus
ENSSBOG00000032787	ZC3HC1	80	61.404	ENSSPUG00000000778	ZC3HC1	72	66.667	Sphenodon_punctatus
ENSSBOG00000032787	ZC3HC1	94	55.172	ENSSPAG00000020041	zc3hc1	77	55.172	Stegastes_partitus
ENSSBOG00000032787	ZC3HC1	100	88.197	ENSSSCG00000016565	ZC3HC1	84	95.652	Sus_scrofa
ENSSBOG00000032787	ZC3HC1	92	64.583	ENSTGUG00000016262	ZC3HC1	100	60.163	Taeniopygia_guttata
ENSSBOG00000032787	ZC3HC1	92	52.294	ENSTRUG00000020077	zc3hc1	76	52.294	Takifugu_rubripes
ENSSBOG00000032787	ZC3HC1	93	52.294	ENSTNIG00000007585	zc3hc1	81	52.294	Tetraodon_nigroviridis
ENSSBOG00000032787	ZC3HC1	98	90.686	ENSTBEG00000005216	ZC3HC1	78	89.145	Tupaia_belangeri
ENSSBOG00000032787	ZC3HC1	99	89.268	ENSTTRG00000008458	ZC3HC1	88	87.742	Tursiops_truncatus
ENSSBOG00000032787	ZC3HC1	100	89.706	ENSUAMG00000020249	ZC3HC1	88	89.706	Ursus_americanus
ENSSBOG00000032787	ZC3HC1	100	89.706	ENSUMAG00000009268	ZC3HC1	88	89.706	Ursus_maritimus
ENSSBOG00000032787	ZC3HC1	88	89.796	ENSVPAG00000010846	ZC3HC1	72	89.796	Vicugna_pacos
ENSSBOG00000032787	ZC3HC1	95	89.706	ENSVVUG00000012386	ZC3HC1	87	89.706	Vulpes_vulpes
ENSSBOG00000032787	ZC3HC1	90	59.167	ENSXETG00000033900	zc3hc1	76	59.167	Xenopus_tropicalis
ENSSBOG00000032787	ZC3HC1	84	61.972	ENSXCOG00000013570	zc3hc1	78	61.972	Xiphophorus_couchianus
ENSSBOG00000032787	ZC3HC1	84	66.197	ENSXMAG00000010979	zc3hc1	80	66.197	Xiphophorus_maculatus