EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000033023 (Gene tree)
Gene ID: 101048134
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 6043 bases
Position: chrJH378105.1:48724859-48730901
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	1	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	2	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	3	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	4	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	5	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	6	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	7	8
ENSSBOP00000033723	zf-C2H2	PF00096.26	2.4e-38	8	8
ENSSBOP00000033723	zf-met	PF12874.7	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000050639	ZNF408-201	2509	XM_003920043	ENSSBOP00000033723	718 (aa)	XP_003920092	A0A2K6UP96

Gene Model

Click here to download ENSSBOG00000033023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000033023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000033023	ZNF408	62	42.759	ENSSBOG00000030730	ZNF2	99	44.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000033023	ZNF408	99	88.732	ENSG00000175213	ZNF408	99	88.169	Homo_sapiens
ENSSBOG00000033023	ZNF408	100	78.897	ENSAMEG00000006904	ZNF408	98	79.102	Ailuropoda_melanoleuca
ENSSBOG00000033023	ZNF408	99	87.535	ENSANAG00000036294	ZNF408	93	94.108	Aotus_nancymaae
ENSSBOG00000033023	ZNF408	90	38.723	ENSAMXG00000032642	znf408	91	39.091	Astyanax_mexicanus
ENSSBOG00000033023	ZNF408	99	93.662	ENSCJAG00000019859	ZNF408	99	93.662	Callithrix_jacchus
ENSSBOG00000033023	ZNF408	100	78.493	ENSCAFG00000009143	ZNF408	95	79.666	Canis_familiaris
ENSSBOG00000033023	ZNF408	100	78.493	ENSCAFG00020019155	ZNF408	95	79.666	Canis_lupus_dingo
ENSSBOG00000033023	ZNF408	82	76.342	ENSCHIG00000025346	ZNF408	97	75.798	Capra_hircus
ENSSBOG00000033023	ZNF408	100	80.389	ENSTSYG00000025443	ZNF408	98	80.622	Carlito_syrichta
ENSSBOG00000033023	ZNF408	99	94.648	ENSCCAG00000029472	ZNF408	99	93.521	Cebus_capucinus
ENSSBOG00000033023	ZNF408	64	95.876	ENSCHOG00000009909	ZNF408	75	95.876	Choloepus_hoffmanni
ENSSBOG00000033023	ZNF408	100	68.750	ENSCGRG00001023588	Zfp408	99	68.785	Cricetulus_griseus_chok1gshd
ENSSBOG00000033023	ZNF408	100	68.750	ENSCGRG00000017618	Zfp408	99	68.785	Cricetulus_griseus_crigri
ENSSBOG00000033023	ZNF408	100	76.177	ENSDNOG00000047669	ZNF408	98	76.338	Dasypus_novemcinctus
ENSSBOG00000033023	ZNF408	99	70.225	ENSDORG00000000387	Zfp408	98	70.690	Dipodomys_ordii
ENSSBOG00000033023	ZNF408	89	62.389	ENSETEG00000017621	-	95	66.730	Echinops_telfairi
ENSSBOG00000033023	ZNF408	100	78.237	ENSEASG00005015461	ZNF408	98	78.279	Equus_asinus_asinus
ENSSBOG00000033023	ZNF408	100	78.099	ENSECAG00000010878	ZNF408	98	78.138	Equus_caballus
ENSSBOG00000033023	ZNF408	100	66.389	ENSEEUG00000010466	ZNF408	93	69.585	Erinaceus_europaeus
ENSSBOG00000033023	ZNF408	100	79.167	ENSFCAG00000029105	ZNF408	99	79.296	Felis_catus
ENSSBOG00000033023	ZNF408	83	42.857	ENSFHEG00000016754	-	78	41.818	Fundulus_heteroclitus
ENSSBOG00000033023	ZNF408	93	36.153	ENSGAFG00000018557	-	99	35.744	Gambusia_affinis
ENSSBOG00000033023	ZNF408	99	88.310	ENSGGOG00000010152	ZNF408	99	87.746	Gorilla_gorilla
ENSSBOG00000033023	ZNF408	85	78.065	ENSLAFG00000027848	ZNF408	99	77.742	Loxodonta_africana
ENSSBOG00000033023	ZNF408	98	83.003	ENSMICG00000045320	ZNF408	98	83.144	Microcebus_murinus
ENSSBOG00000033023	ZNF408	75	52.685	ENSMODG00000019895	-	84	52.000	Monodelphis_domestica
ENSSBOG00000033023	ZNF408	98	79.523	ENSMPUG00000005490	ZNF408	98	79.552	Mustela_putorius_furo
ENSSBOG00000033023	ZNF408	99	70.950	ENSNGAG00000000309	Zfp408	98	71.023	Nannospalax_galili
ENSSBOG00000033023	ZNF408	100	88.056	ENSNLEG00000014132	ZNF408	99	87.465	Nomascus_leucogenys
ENSSBOG00000033023	ZNF408	95	66.176	ENSOPRG00000009225	ZNF408	95	65.685	Ochotona_princeps
ENSSBOG00000033023	ZNF408	100	76.667	ENSOCUG00000010953	ZNF408	98	76.504	Oryctolagus_cuniculus
ENSSBOG00000033023	ZNF408	86	82.982	ENSOGAG00000034080	ZNF408	100	81.848	Otolemur_garnettii
ENSSBOG00000033023	ZNF408	99	88.592	ENSPPAG00000034993	ZNF408	99	88.028	Pan_paniscus
ENSSBOG00000033023	ZNF408	100	79.444	ENSPPRG00000016866	ZNF408	99	79.577	Panthera_pardus
ENSSBOG00000033023	ZNF408	100	78.788	ENSPTIG00000015467	ZNF408	99	79.050	Panthera_tigris_altaica
ENSSBOG00000033023	ZNF408	99	88.592	ENSPTRG00000003551	ZNF408	99	88.028	Pan_troglodytes
ENSSBOG00000033023	ZNF408	77	70.163	ENSPEMG00000016757	Zfp408	99	70.163	Peromyscus_maniculatus_bairdii
ENSSBOG00000033023	ZNF408	93	36.164	ENSPFOG00000001760	-	90	49.198	Poecilia_formosa
ENSSBOG00000033023	ZNF408	82	47.619	ENSPLAG00000019895	-	99	47.273	Poecilia_latipinna
ENSSBOG00000033023	ZNF408	51	50.134	ENSPMEG00000021147	-	70	50.543	Poecilia_mexicana
ENSSBOG00000033023	ZNF408	93	36.549	ENSPREG00000017068	-	99	35.935	Poecilia_reticulata
ENSSBOG00000033023	ZNF408	99	87.165	ENSPPYG00000003318	ZNF408	99	87.458	Pongo_abelii
ENSSBOG00000033023	ZNF408	100	73.296	ENSPCAG00000014001	ZNF408	98	73.267	Procavia_capensis
ENSSBOG00000033023	ZNF408	98	82.511	ENSPCOG00000028698	ZNF408	98	82.511	Propithecus_coquereli
ENSSBOG00000033023	ZNF408	98	79.944	ENSPVAG00000015791	ZNF408	99	79.635	Pteropus_vampyrus
ENSSBOG00000033023	ZNF408	100	78.237	ENSSSCG00000023097	ZNF408	96	78.073	Sus_scrofa
ENSSBOG00000033023	ZNF408	75	89.723	ENSTBEG00000004260	ZNF408	81	89.723	Tupaia_belangeri
ENSSBOG00000033023	ZNF408	100	79.034	ENSUAMG00000026154	ZNF408	99	79.301	Ursus_americanus
ENSSBOG00000033023	ZNF408	100	79.448	ENSUMAG00000014405	ZNF408	99	79.441	Ursus_maritimus
ENSSBOG00000033023	ZNF408	100	78.630	ENSVVUG00000026805	ZNF408	95	79.248	Vulpes_vulpes
ENSSBOG00000033023	ZNF408	52	54.354	ENSXETG00000001980	znf408	100	53.034	Xenopus_tropicalis
ENSSBOG00000033023	ZNF408	51	51.206	ENSXCOG00000002869	-	73	49.330	Xiphophorus_couchianus
ENSSBOG00000033023	ZNF408	51	50.269	ENSXMAG00000018347	-	70	49.730	Xiphophorus_maculatus