EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000033063 (Gene tree)
Gene ID: 101040782
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 3027 bases
Position: chrJH378134.1:14173177-14176203
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000033795	PseudoU_synth_2	PF00849.22	9.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000050711	RPUSD1-201	2236	XM_003928360	ENSSBOP00000033795	302 (aa)	XP_003928409	A0A2K6UPF4

Gene Model

Click here to download ENSSBOG00000033063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000033063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000033063	RPUSD1	100	90.064	ENSG00000007376	RPUSD1	100	94.643	Homo_sapiens
ENSSBOG00000033063	RPUSD1	98	57.947	ENSAPOG00000022221	rpusd1	98	57.947	Acanthochromis_polyacanthus
ENSSBOG00000033063	RPUSD1	100	83.444	ENSAMEG00000007461	RPUSD1	100	83.444	Ailuropoda_melanoleuca
ENSSBOG00000033063	RPUSD1	98	58.170	ENSACIG00000015863	rpusd1	98	58.170	Amphilophus_citrinellus
ENSSBOG00000033063	RPUSD1	98	57.049	ENSAOCG00000021975	rpusd1	95	57.049	Amphiprion_ocellaris
ENSSBOG00000033063	RPUSD1	98	56.721	ENSAPEG00000001316	rpusd1	95	56.721	Amphiprion_percula
ENSSBOG00000033063	RPUSD1	84	65.217	ENSATEG00000002984	rpusd1	98	57.705	Anabas_testudineus
ENSSBOG00000033063	RPUSD1	78	58.848	ENSAPLG00000012316	RPUSD1	99	58.436	Anas_platyrhynchos
ENSSBOG00000033063	RPUSD1	99	66.887	ENSACAG00000008953	RPUSD1	100	65.563	Anolis_carolinensis
ENSSBOG00000033063	RPUSD1	100	95.192	ENSANAG00000024709	RPUSD1	100	95.192	Aotus_nancymaae
ENSSBOG00000033063	RPUSD1	98	57.742	ENSACLG00000013692	rpusd1	98	58.632	Astatotilapia_calliptera
ENSSBOG00000033063	RPUSD1	99	59.406	ENSAMXG00000019802	rpusd1	100	59.406	Astyanax_mexicanus
ENSSBOG00000033063	RPUSD1	100	85.065	ENSBTAG00000000179	RPUSD1	100	83.766	Bos_taurus
ENSSBOG00000033063	RPUSD1	100	94.231	ENSCJAG00000012253	RPUSD1	100	94.231	Callithrix_jacchus
ENSSBOG00000033063	RPUSD1	99	85.382	ENSCAFG00000019614	RPUSD1	99	85.382	Canis_familiaris
ENSSBOG00000033063	RPUSD1	99	85.382	ENSCAFG00020008891	RPUSD1	99	85.382	Canis_lupus_dingo
ENSSBOG00000033063	RPUSD1	100	83.766	ENSCHIG00000012872	RPUSD1	100	82.468	Capra_hircus
ENSSBOG00000033063	RPUSD1	99	88.372	ENSTSYG00000036934	RPUSD1	99	88.372	Carlito_syrichta
ENSSBOG00000033063	RPUSD1	100	83.987	ENSCAPG00000014219	RPUSD1	100	82.680	Cavia_aperea
ENSSBOG00000033063	RPUSD1	100	83.987	ENSCPOG00000034604	RPUSD1	100	82.680	Cavia_porcellus
ENSSBOG00000033063	RPUSD1	100	95.513	ENSCCAG00000034385	RPUSD1	100	95.513	Cebus_capucinus
ENSSBOG00000033063	RPUSD1	100	90.705	ENSCATG00000042983	RPUSD1	100	90.064	Cercocebus_atys
ENSSBOG00000033063	RPUSD1	100	84.314	ENSCLAG00000013966	RPUSD1	100	83.987	Chinchilla_lanigera
ENSSBOG00000033063	RPUSD1	100	90.705	ENSCSAG00000012121	RPUSD1	100	89.744	Chlorocebus_sabaeus
ENSSBOG00000033063	RPUSD1	99	64.474	ENSCPBG00000021101	RPUSD1	99	64.474	Chrysemys_picta_bellii
ENSSBOG00000033063	RPUSD1	90	95.221	ENSCANG00000028576	RPUSD1	94	96.591	Colobus_angolensis_palliatus
ENSSBOG00000033063	RPUSD1	100	82.838	ENSCGRG00001014253	Rpusd1	100	82.178	Cricetulus_griseus_chok1gshd
ENSSBOG00000033063	RPUSD1	100	82.838	ENSCGRG00000017995	Rpusd1	100	82.178	Cricetulus_griseus_crigri
ENSSBOG00000033063	RPUSD1	99	57.616	ENSCSEG00000018512	rpusd1	100	57.191	Cynoglossus_semilaevis
ENSSBOG00000033063	RPUSD1	98	57.667	ENSCVAG00000022746	rpusd1	98	56.478	Cyprinodon_variegatus
ENSSBOG00000033063	RPUSD1	99	61.204	ENSDARG00000060192	rpusd1	100	61.667	Danio_rerio
ENSSBOG00000033063	RPUSD1	100	79.430	ENSDNOG00000003721	RPUSD1	100	84.091	Dasypus_novemcinctus
ENSSBOG00000033063	RPUSD1	100	87.789	ENSDORG00000026656	Rpusd1	100	87.789	Dipodomys_ordii
ENSSBOG00000033063	RPUSD1	99	47.634	ENSEBUG00000008767	rpusd1	94	46.349	Eptatretus_burgeri
ENSSBOG00000033063	RPUSD1	99	84.444	ENSEASG00005018421	RPUSD1	75	84.444	Equus_asinus_asinus
ENSSBOG00000033063	RPUSD1	84	60.630	ENSELUG00000014307	rpusd1	88	54.426	Esox_lucius
ENSSBOG00000033063	RPUSD1	100	84.437	ENSFCAG00000010359	RPUSD1	100	84.437	Felis_catus
ENSSBOG00000033063	RPUSD1	99	66.337	ENSFALG00000003211	RPUSD1	100	65.677	Ficedula_albicollis
ENSSBOG00000033063	RPUSD1	100	84.641	ENSFDAG00000013398	RPUSD1	100	84.314	Fukomys_damarensis
ENSSBOG00000033063	RPUSD1	98	56.106	ENSFHEG00000004736	rpusd1	98	56.106	Fundulus_heteroclitus
ENSSBOG00000033063	RPUSD1	84	63.636	ENSGMOG00000010756	rpusd1	98	56.579	Gadus_morhua
ENSSBOG00000033063	RPUSD1	99	64.590	ENSGALG00000005315	RPUSD1	100	63.934	Gallus_gallus
ENSSBOG00000033063	RPUSD1	98	57.667	ENSGAFG00000009886	rpusd1	98	57.000	Gambusia_affinis
ENSSBOG00000033063	RPUSD1	83	64.940	ENSGACG00000014276	rpusd1	97	58.086	Gasterosteus_aculeatus
ENSSBOG00000033063	RPUSD1	99	64.474	ENSGAGG00000004181	RPUSD1	99	64.474	Gopherus_agassizii
ENSSBOG00000033063	RPUSD1	100	89.744	ENSGGOG00000013997	RPUSD1	100	89.103	Gorilla_gorilla
ENSSBOG00000033063	RPUSD1	98	57.419	ENSHBUG00000023728	rpusd1	98	58.306	Haplochromis_burtoni
ENSSBOG00000033063	RPUSD1	100	84.314	ENSHGLG00000002595	RPUSD1	100	84.641	Heterocephalus_glaber_female
ENSSBOG00000033063	RPUSD1	100	84.314	ENSHGLG00100014303	RPUSD1	100	84.641	Heterocephalus_glaber_male
ENSSBOG00000033063	RPUSD1	98	59.259	ENSHCOG00000002390	rpusd1	99	59.259	Hippocampus_comes
ENSSBOG00000033063	RPUSD1	99	61.386	ENSIPUG00000001570	rpusd1	99	61.386	Ictalurus_punctatus
ENSSBOG00000033063	RPUSD1	100	87.582	ENSSTOG00000004276	RPUSD1	100	86.275	Ictidomys_tridecemlineatus
ENSSBOG00000033063	RPUSD1	100	83.819	ENSJJAG00000015696	Rpusd1	100	84.539	Jaculus_jaculus
ENSSBOG00000033063	RPUSD1	98	57.000	ENSKMAG00000017287	rpusd1	98	57.333	Kryptolebias_marmoratus
ENSSBOG00000033063	RPUSD1	98	57.377	ENSLBEG00000013354	RPUSD1	98	57.377	Labrus_bergylta
ENSSBOG00000033063	RPUSD1	98	57.377	ENSLBEG00000022502	rpusd1	98	57.377	Labrus_bergylta
ENSSBOG00000033063	RPUSD1	99	62.252	ENSLACG00000008869	RPUSD1	99	62.252	Latimeria_chalumnae
ENSSBOG00000033063	RPUSD1	72	73.272	ENSLOCG00000005682	rpusd1	99	73.272	Lepisosteus_oculatus
ENSSBOG00000033063	RPUSD1	100	83.444	ENSLAFG00000002115	RPUSD1	100	83.444	Loxodonta_africana
ENSSBOG00000033063	RPUSD1	100	91.346	ENSMFAG00000003961	RPUSD1	100	90.385	Macaca_fascicularis
ENSSBOG00000033063	RPUSD1	100	91.346	ENSMMUG00000000842	RPUSD1	100	90.385	Macaca_mulatta
ENSSBOG00000033063	RPUSD1	100	91.346	ENSMNEG00000042712	RPUSD1	100	90.385	Macaca_nemestrina
ENSSBOG00000033063	RPUSD1	100	91.346	ENSMLEG00000030591	RPUSD1	100	90.385	Mandrillus_leucophaeus
ENSSBOG00000033063	RPUSD1	98	58.497	ENSMAMG00000004735	rpusd1	98	57.516	Mastacembelus_armatus
ENSSBOG00000033063	RPUSD1	98	57.742	ENSMZEG00005003214	rpusd1	98	58.632	Maylandia_zebra
ENSSBOG00000033063	RPUSD1	97	63.123	ENSMGAG00000005447	RPUSD1	99	61.765	Meleagris_gallopavo
ENSSBOG00000033063	RPUSD1	87	76.692	ENSMAUG00000019998	Rpusd1	100	76.692	Mesocricetus_auratus
ENSSBOG00000033063	RPUSD1	100	88.274	ENSMICG00000017561	RPUSD1	100	86.971	Microcebus_murinus
ENSSBOG00000033063	RPUSD1	99	83.279	ENSMOCG00000014082	Rpusd1	99	82.951	Microtus_ochrogaster
ENSSBOG00000033063	RPUSD1	98	57.576	ENSMMOG00000012569	rpusd1	99	58.108	Mola_mola
ENSSBOG00000033063	RPUSD1	100	68.285	ENSMODG00000016882	RPUSD1	100	67.638	Monodelphis_domestica
ENSSBOG00000033063	RPUSD1	98	57.516	ENSMALG00000017818	rpusd1	98	58.170	Monopterus_albus
ENSSBOG00000033063	RPUSD1	100	83.660	MGP_CAROLIEiJ_G0021244	Rpusd1	100	83.007	Mus_caroli
ENSSBOG00000033063	RPUSD1	100	83.660	ENSMUSG00000041199	Rpusd1	100	83.007	Mus_musculus
ENSSBOG00000033063	RPUSD1	100	81.877	MGP_PahariEiJ_G0023562	Rpusd1	99	81.967	Mus_pahari
ENSSBOG00000033063	RPUSD1	100	83.660	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.007	Mus_spretus
ENSSBOG00000033063	RPUSD1	100	83.113	ENSMPUG00000015897	RPUSD1	100	83.113	Mustela_putorius_furo
ENSSBOG00000033063	RPUSD1	100	83.654	ENSMLUG00000001089	RPUSD1	100	83.013	Myotis_lucifugus
ENSSBOG00000033063	RPUSD1	100	83.987	ENSNGAG00000003595	Rpusd1	100	83.333	Nannospalax_galili
ENSSBOG00000033063	RPUSD1	98	58.923	ENSNBRG00000006457	rpusd1	98	58.923	Neolamprologus_brichardi
ENSSBOG00000033063	RPUSD1	55	85.714	ENSNLEG00000008424	-	100	85.714	Nomascus_leucogenys
ENSSBOG00000033063	RPUSD1	100	70.724	ENSMEUG00000016049	RPUSD1	100	69.967	Notamacropus_eugenii
ENSSBOG00000033063	RPUSD1	99	80.333	ENSOPRG00000008340	RPUSD1	99	79.000	Ochotona_princeps
ENSSBOG00000033063	RPUSD1	100	83.007	ENSODEG00000016945	RPUSD1	100	82.353	Octodon_degus
ENSSBOG00000033063	RPUSD1	98	57.329	ENSONIG00000015672	rpusd1	99	57.655	Oreochromis_niloticus
ENSSBOG00000033063	RPUSD1	99	58.940	ENSORLG00000013009	rpusd1	99	58.609	Oryzias_latipes
ENSSBOG00000033063	RPUSD1	99	58.609	ENSORLG00020010382	rpusd1	99	58.278	Oryzias_latipes_hni
ENSSBOG00000033063	RPUSD1	99	57.947	ENSORLG00015021354	rpusd1	99	57.616	Oryzias_latipes_hsok
ENSSBOG00000033063	RPUSD1	98	58.586	ENSOMEG00000021426	rpusd1	98	58.249	Oryzias_melastigma
ENSSBOG00000033063	RPUSD1	100	86.218	ENSOGAG00000003795	RPUSD1	100	86.218	Otolemur_garnettii
ENSSBOG00000033063	RPUSD1	100	84.740	ENSOARG00000014254	RPUSD1	100	83.442	Ovis_aries
ENSSBOG00000033063	RPUSD1	100	89.744	ENSPPAG00000034797	RPUSD1	100	89.103	Pan_paniscus
ENSSBOG00000033063	RPUSD1	100	84.768	ENSPPRG00000012389	RPUSD1	100	84.768	Panthera_pardus
ENSSBOG00000033063	RPUSD1	100	84.768	ENSPTIG00000008545	RPUSD1	92	84.768	Panthera_tigris_altaica
ENSSBOG00000033063	RPUSD1	100	89.744	ENSPTRG00000007565	RPUSD1	100	89.103	Pan_troglodytes
ENSSBOG00000033063	RPUSD1	100	90.705	ENSPANG00000024401	RPUSD1	100	89.744	Papio_anubis
ENSSBOG00000033063	RPUSD1	99	61.311	ENSPKIG00000018890	rpusd1	91	60.656	Paramormyrops_kingsleyae
ENSSBOG00000033063	RPUSD1	99	65.246	ENSPSIG00000013945	RPUSD1	100	64.590	Pelodiscus_sinensis
ENSSBOG00000033063	RPUSD1	98	57.966	ENSPMGG00000014950	rpusd1	98	57.627	Periophthalmus_magnuspinnatus
ENSSBOG00000033063	RPUSD1	100	82.680	ENSPEMG00000000497	Rpusd1	100	82.353	Peromyscus_maniculatus_bairdii
ENSSBOG00000033063	RPUSD1	82	58.167	ENSPMAG00000001563	rpusd1	81	58.167	Petromyzon_marinus
ENSSBOG00000033063	RPUSD1	100	70.164	ENSPCIG00000021216	-	94	69.180	Phascolarctos_cinereus
ENSSBOG00000033063	RPUSD1	98	59.197	ENSPFOG00000007946	rpusd1	98	59.197	Poecilia_formosa
ENSSBOG00000033063	RPUSD1	98	59.197	ENSPLAG00000011925	rpusd1	98	59.197	Poecilia_latipinna
ENSSBOG00000033063	RPUSD1	98	58.863	ENSPMEG00000002910	rpusd1	98	58.863	Poecilia_mexicana
ENSSBOG00000033063	RPUSD1	98	59.000	ENSPREG00000019851	rpusd1	98	58.333	Poecilia_reticulata
ENSSBOG00000033063	RPUSD1	100	71.192	ENSPCAG00000002258	RPUSD1	100	70.530	Procavia_capensis
ENSSBOG00000033063	RPUSD1	100	86.859	ENSPCOG00000022582	RPUSD1	100	86.538	Propithecus_coquereli
ENSSBOG00000033063	RPUSD1	100	81.410	ENSPVAG00000013104	RPUSD1	100	80.449	Pteropus_vampyrus
ENSSBOG00000033063	RPUSD1	98	58.983	ENSPNYG00000024076	rpusd1	98	59.322	Pundamilia_nyererei
ENSSBOG00000033063	RPUSD1	98	58.108	ENSPNAG00000013806	rpusd1	100	57.525	Pygocentrus_nattereri
ENSSBOG00000033063	RPUSD1	100	83.333	ENSRNOG00000023639	Rpusd1	100	82.680	Rattus_norvegicus
ENSSBOG00000033063	RPUSD1	100	91.026	ENSRBIG00000030238	RPUSD1	100	90.385	Rhinopithecus_bieti
ENSSBOG00000033063	RPUSD1	100	91.026	ENSRROG00000036663	RPUSD1	100	90.385	Rhinopithecus_roxellana
ENSSBOG00000033063	RPUSD1	100	69.508	ENSSHAG00000013500	RPUSD1	100	68.852	Sarcophilus_harrisii
ENSSBOG00000033063	RPUSD1	99	63.245	ENSSFOG00015014394	rpusd1	99	62.914	Scleropages_formosus
ENSSBOG00000033063	RPUSD1	98	57.049	ENSSMAG00000008045	rpusd1	91	57.049	Scophthalmus_maximus
ENSSBOG00000033063	RPUSD1	84	67.589	ENSSDUG00000001829	rpusd1	95	60.328	Seriola_dumerili
ENSSBOG00000033063	RPUSD1	84	67.589	ENSSLDG00000020853	rpusd1	95	60.328	Seriola_lalandi_dorsalis
ENSSBOG00000033063	RPUSD1	55	90.419	ENSSARG00000011187	-	100	90.419	Sorex_araneus
ENSSBOG00000033063	RPUSD1	62	54.592	ENSSPUG00000005119	-	100	53.125	Sphenodon_punctatus
ENSSBOG00000033063	RPUSD1	98	57.705	ENSSPAG00000012708	rpusd1	98	58.033	Stegastes_partitus
ENSSBOG00000033063	RPUSD1	100	83.333	ENSSSCG00000008000	RPUSD1	98	88.976	Sus_scrofa
ENSSBOG00000033063	RPUSD1	84	72.266	ENSTGUG00000015375	RPUSD1	100	72.266	Taeniopygia_guttata
ENSSBOG00000033063	RPUSD1	98	56.863	ENSTRUG00000003041	rpusd1	98	56.863	Takifugu_rubripes
ENSSBOG00000033063	RPUSD1	98	54.730	ENSTNIG00000002660	rpusd1	99	54.730	Tetraodon_nigroviridis
ENSSBOG00000033063	RPUSD1	99	82.958	ENSTTRG00000010167	RPUSD1	99	82.637	Tursiops_truncatus
ENSSBOG00000033063	RPUSD1	100	83.444	ENSUAMG00000012736	RPUSD1	100	83.444	Ursus_americanus
ENSSBOG00000033063	RPUSD1	100	83.444	ENSUMAG00000021174	RPUSD1	100	83.444	Ursus_maritimus
ENSSBOG00000033063	RPUSD1	99	83.389	ENSVVUG00000012357	RPUSD1	99	83.389	Vulpes_vulpes
ENSSBOG00000033063	RPUSD1	100	61.513	ENSXETG00000007184	rpusd1	100	61.184	Xenopus_tropicalis
ENSSBOG00000033063	RPUSD1	98	57.333	ENSXCOG00000017930	rpusd1	98	57.667	Xiphophorus_couchianus
ENSSBOG00000033063	RPUSD1	98	58.000	ENSXMAG00000024084	rpusd1	98	57.333	Xiphophorus_maculatus