EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000033708 (Gene tree)
Gene ID: 101037943
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 6272 bases
Position: chrJH378189.1:6011833-6018104
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000035107	RRM_1	PF00076.22	1.3e-32	1	2
ENSSBOP00000035107	RRM_1	PF00076.22	1.3e-32	2	2
ENSSBOP00000035109	RRM_1	PF00076.22	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000052037	-	839	-	ENSSBOP00000035109	135 (aa)	-	A0A2K6UT69
ENSSBOT00000052035	-	4467	XM_003936391	ENSSBOP00000035107	344 (aa)	XP_003936440	A0A2K6UTC2

Gene Model

Click here to download ENSSBOG00000033708's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG
sbq05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000033708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000033708	-	56	36.905	ENSSBOG00000026502	-	87	36.905
ENSSBOG00000033708	-	56	48.101	ENSSBOG00000025074	SRSF7	58	48.101
ENSSBOG00000033708	-	72	32.184	ENSSBOG00000034106	TIA1	66	32.184
ENSSBOG00000033708	-	58	40.670	ENSSBOG00000025377	-	77	50.000
ENSSBOG00000033708	-	50	71.642	ENSSBOG00000030784	SRSF5	86	62.295
ENSSBOG00000033708	-	56	46.835	ENSSBOG00000022192	SRSF3	64	46.835
ENSSBOG00000033708	-	62	32.143	ENSSBOG00000034474	RBM4B	57	32.143
ENSSBOG00000033708	-	56	40.506	ENSSBOG00000027102	-	57	40.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000033708	-	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSSBOG00000033708	-	58	93.590	ENSAPOG00000016635	-	84	83.088	Acanthochromis_polyacanthus
ENSSBOG00000033708	-	94	84.923	ENSAMEG00000003710	SRSF6	94	84.663	Ailuropoda_melanoleuca
ENSSBOG00000033708	-	94	62.462	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSSBOG00000033708	-	86	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSSBOG00000033708	-	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSSBOG00000033708	-	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSSBOG00000033708	-	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSSBOG00000033708	-	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSSBOG00000033708	-	94	82.099	ENSACAG00000002061	SRSF6	93	84.615	Anolis_carolinensis
ENSSBOG00000033708	-	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSSBOG00000033708	-	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSSBOG00000033708	-	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSSBOG00000033708	-	55	93.243	ENSAMXG00000003101	-	89	60.778	Astyanax_mexicanus
ENSSBOG00000033708	-	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSSBOG00000033708	-	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSSBOG00000033708	-	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSSBOG00000033708	-	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSSBOG00000033708	-	100	96.243	ENSCHIG00000009148	-	100	96.243	Capra_hircus
ENSSBOG00000033708	-	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSSBOG00000033708	-	93	81.366	ENSTSYG00000026476	SRSF6	93	78.462	Carlito_syrichta
ENSSBOG00000033708	-	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSSBOG00000033708	-	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSSBOG00000033708	-	94	67.178	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSSBOG00000033708	-	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSSBOG00000033708	-	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSSBOG00000033708	-	100	98.547	ENSCSAG00000014022	SRSF6	100	98.547	Chlorocebus_sabaeus
ENSSBOG00000033708	-	100	82.370	ENSCHOG00000000561	SRSF6	77	100.000	Choloepus_hoffmanni
ENSSBOG00000033708	-	58	97.436	ENSCPBG00000018200	SRSF6	94	85.061	Chrysemys_picta_bellii
ENSSBOG00000033708	-	100	98.256	ENSCANG00000037774	-	100	98.256	Colobus_angolensis_palliatus
ENSSBOG00000033708	-	100	84.012	ENSCANG00000042529	-	100	84.012	Colobus_angolensis_palliatus
ENSSBOG00000033708	-	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSSBOG00000033708	-	56	96.891	ENSCGRG00000006618	Srsf6	92	96.392	Cricetulus_griseus_crigri
ENSSBOG00000033708	-	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSSBOG00000033708	-	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSSBOG00000033708	-	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSSBOG00000033708	-	94	95.679	ENSDNOG00000008410	SRSF6	94	95.679	Dasypus_novemcinctus
ENSSBOG00000033708	-	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSSBOG00000033708	-	92	92.812	ENSETEG00000006221	SRSF6	94	90.154	Echinops_telfairi
ENSSBOG00000033708	-	100	96.243	ENSEASG00005023429	SRSF6	100	96.243	Equus_asinus_asinus
ENSSBOG00000033708	-	100	96.243	ENSECAG00000023932	SRSF6	100	96.243	Equus_caballus
ENSSBOG00000033708	-	56	92.308	ENSEEUG00000002324	SRSF6	90	92.424	Erinaceus_europaeus
ENSSBOG00000033708	-	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSSBOG00000033708	-	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSSBOG00000033708	-	100	96.532	ENSFCAG00000032814	SRSF6	100	96.532	Felis_catus
ENSSBOG00000033708	-	94	81.173	ENSFDAG00000012191	SRSF6	94	78.154	Fukomys_damarensis
ENSSBOG00000033708	-	89	70.418	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSSBOG00000033708	-	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSSBOG00000033708	-	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSSBOG00000033708	-	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSSBOG00000033708	-	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSSBOG00000033708	-	98	61.194	ENSGACG00000006084	srsf6a	53	82.796	Gasterosteus_aculeatus
ENSSBOG00000033708	-	58	97.436	ENSGAGG00000003238	SRSF6	94	85.061	Gopherus_agassizii
ENSSBOG00000033708	-	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSSBOG00000033708	-	56	89.474	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSSBOG00000033708	-	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSSBOG00000033708	-	90	75.399	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSSBOG00000033708	-	94	81.481	ENSHGLG00100005043	SRSF6	94	78.462	Heterocephalus_glaber_male
ENSSBOG00000033708	-	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSSBOG00000033708	-	58	92.308	ENSIPUG00000004776	-	75	73.504	Ictalurus_punctatus
ENSSBOG00000033708	-	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSSBOG00000033708	-	56	94.764	ENSJJAG00000020690	Srsf6	91	94.819	Jaculus_jaculus
ENSSBOG00000033708	-	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSSBOG00000033708	-	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSSBOG00000033708	-	89	82.581	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSSBOG00000033708	-	69	94.561	ENSLAFG00000006682	SRSF6	89	94.348	Loxodonta_africana
ENSSBOG00000033708	-	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSSBOG00000033708	-	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSSBOG00000033708	-	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSSBOG00000033708	-	100	97.093	ENSMNEG00000038270	-	100	97.093	Macaca_nemestrina
ENSSBOG00000033708	-	63	97.674	ENSMLEG00000031524	SRSF6	100	97.674	Mandrillus_leucophaeus
ENSSBOG00000033708	-	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSSBOG00000033708	-	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSSBOG00000033708	-	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSSBOG00000033708	-	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSSBOG00000033708	-	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSSBOG00000033708	-	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSSBOG00000033708	-	56	96.891	ENSMOCG00000018738	Srsf6	92	96.392	Microtus_ochrogaster
ENSSBOG00000033708	-	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSSBOG00000033708	-	58	97.436	ENSMODG00000003107	SRSF6	95	91.104	Monodelphis_domestica
ENSSBOG00000033708	-	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSSBOG00000033708	-	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSSBOG00000033708	-	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSSBOG00000033708	-	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSSBOG00000033708	-	83	97.569	ENSMPUG00000017692	SRSF6	99	97.569	Mustela_putorius_furo
ENSSBOG00000033708	-	93	79.814	ENSMLUG00000016618	SRSF6	94	79.692	Myotis_lucifugus
ENSSBOG00000033708	-	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSSBOG00000033708	-	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSSBOG00000033708	-	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSSBOG00000033708	-	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSSBOG00000033708	-	58	97.436	ENSMEUG00000014615	SRSF6	100	92.484	Notamacropus_eugenii
ENSSBOG00000033708	-	69	96.653	ENSOPRG00000002017	-	89	96.522	Ochotona_princeps
ENSSBOG00000033708	-	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSSBOG00000033708	-	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSSBOG00000033708	-	83	80.392	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSSBOG00000033708	-	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSSBOG00000033708	-	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSSBOG00000033708	-	98	68.613	ENSOGAG00000014468	SRSF6	94	96.000	Otolemur_garnettii
ENSSBOG00000033708	-	93	92.857	ENSOARG00000003117	SRSF6	94	92.615	Ovis_aries
ENSSBOG00000033708	-	90	85.437	ENSPPAG00000043131	-	100	87.702	Pan_paniscus
ENSSBOG00000033708	-	100	98.837	ENSPPAG00000034327	-	100	98.837	Pan_paniscus
ENSSBOG00000033708	-	100	96.532	ENSPPRG00000008917	SRSF6	100	96.532	Panthera_pardus
ENSSBOG00000033708	-	56	95.385	ENSPTIG00000019153	SRSF6	91	94.898	Panthera_tigris_altaica
ENSSBOG00000033708	-	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSSBOG00000033708	-	90	85.437	ENSPTRG00000046274	-	100	87.702	Pan_troglodytes
ENSSBOG00000033708	-	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSSBOG00000033708	-	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSSBOG00000033708	-	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSSBOG00000033708	-	100	63.143	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSSBOG00000033708	-	89	71.845	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSSBOG00000033708	-	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSSBOG00000033708	-	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSSBOG00000033708	-	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSSBOG00000033708	-	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSSBOG00000033708	-	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSSBOG00000033708	-	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSSBOG00000033708	-	100	99.128	ENSPPYG00000011019	SRSF6	100	99.128	Pongo_abelii
ENSSBOG00000033708	-	58	98.718	ENSPCAG00000010954	SRSF6	96	92.879	Procavia_capensis
ENSSBOG00000033708	-	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSSBOG00000033708	-	94	95.342	ENSPVAG00000015232	SRSF6	94	95.046	Pteropus_vampyrus
ENSSBOG00000033708	-	56	89.474	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSSBOG00000033708	-	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSSBOG00000033708	-	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSSBOG00000033708	-	94	96.894	ENSRNOG00000006380	Srsf6	95	96.594	Rattus_norvegicus
ENSSBOG00000033708	-	100	96.802	ENSRBIG00000041414	SRSF6	100	96.802	Rhinopithecus_bieti
ENSSBOG00000033708	-	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSSBOG00000033708	-	94	87.346	ENSSHAG00000012805	SRSF6	95	90.798	Sarcophilus_harrisii
ENSSBOG00000033708	-	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSSBOG00000033708	-	89	64.095	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSSBOG00000033708	-	59	92.500	ENSSMAG00000014861	-	94	68.504	Scophthalmus_maximus
ENSSBOG00000033708	-	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSSBOG00000033708	-	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSSBOG00000033708	-	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSSBOG00000033708	-	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSSBOG00000033708	-	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSSBOG00000033708	-	75	95.000	ENSSARG00000001602	SRSF6	100	95.000	Sorex_araneus
ENSSBOG00000033708	-	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSSBOG00000033708	-	98	61.871	ENSSPAG00000002362	srsf6a	67	85.714	Stegastes_partitus
ENSSBOG00000033708	-	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSSBOG00000033708	-	100	96.532	ENSSSCG00000007362	SRSF6	100	96.532	Sus_scrofa
ENSSBOG00000033708	-	92	84.520	ENSTGUG00000003455	SRSF6	94	85.061	Taeniopygia_guttata
ENSSBOG00000033708	-	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSSBOG00000033708	-	87	71.096	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSSBOG00000033708	-	84	93.448	ENSTBEG00000013448	SRSF6	93	93.448	Tupaia_belangeri
ENSSBOG00000033708	-	68	95.745	ENSTTRG00000015410	SRSF6	89	95.217	Tursiops_truncatus
ENSSBOG00000033708	-	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSSBOG00000033708	-	56	95.385	ENSUMAG00000001154	SRSF6	91	94.898	Ursus_maritimus
ENSSBOG00000033708	-	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSSBOG00000033708	-	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSSBOG00000033708	-	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus