EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000033726 (Gene tree)
Gene ID: 101034631
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 2299675 bases
Position: chrJH378134.1:18958625-21258299
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000035365	Fox-1_C	PF12414.8	1.6e-42	1	1
ENSSBOP00000035368	Fox-1_C	PF12414.8	2.4e-42	1	1
ENSSBOP00000035299	Fox-1_C	PF12414.8	3.9e-40	1	1
ENSSBOP00000035295	Fox-1_C	PF12414.8	4.1e-40	1	1
ENSSBOP00000035325	Fox-1_C	PF12414.8	4.1e-40	1	1
ENSSBOP00000035289	Fox-1_C	PF12414.8	5.4e-40	1	1
ENSSBOP00000035284	Fox-1_C	PF12414.8	6.3e-40	1	1
ENSSBOP00000035317	Fox-1_C	PF12414.8	3.1e-38	1	1
ENSSBOP00000035388	Fox-1_C	PF12414.8	2.1e-23	1	1
ENSSBOP00000035317	RRM_1	PF00076.22	3.8e-18	1	1
ENSSBOP00000035365	RRM_1	PF00076.22	4.1e-18	1	1
ENSSBOP00000035388	RRM_1	PF00076.22	4.1e-18	1	1
ENSSBOP00000035325	RRM_1	PF00076.22	4.5e-18	1	1
ENSSBOP00000035368	RRM_1	PF00076.22	4.6e-18	1	1
ENSSBOP00000035289	RRM_1	PF00076.22	5.5e-18	1	1
ENSSBOP00000035284	RRM_1	PF00076.22	6.2e-18	1	1
ENSSBOP00000035295	RRM_1	PF00076.22	7.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000052295	RBFOX1-207	1128	XM_010339175	ENSSBOP00000035365	375 (aa)	XP_010337477	A0A2K6UTW4
ENSSBOT00000052213	RBFOX1-201	1530	-	ENSSBOP00000035284	509 (aa)	-	A0A2K6UTP4
ENSSBOT00000052298	RBFOX1-208	4063	XM_010339176	ENSSBOP00000035368	399 (aa)	XP_010337478	A0A2K6UTY6
ENSSBOT00000052228	RBFOX1-204	1143	-	ENSSBOP00000035299	380 (aa)	-	A0A2K6UTQ8
ENSSBOT00000052224	RBFOX1-203	1176	-	ENSSBOP00000035295	391 (aa)	-	A0A2K6UTP5
ENSSBOT00000052218	RBFOX1-202	1401	-	ENSSBOP00000035289	466 (aa)	-	A0A2K6UTP9
ENSSBOT00000052318	RBFOX1-209	1140	-	ENSSBOP00000035388	379 (aa)	-	A0A2K6UU09
ENSSBOT00000052254	RBFOX1-206	4256	XM_010339170	ENSSBOP00000035325	394 (aa)	XP_010337472	A0A2K6UTS5
ENSSBOT00000052246	RBFOX1-205	4259	XM_003928502	ENSSBOP00000035317	395 (aa)	XP_003928551	A0A2K6UTZ2

Gene Model

Click here to download ENSSBOG00000033726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000033726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000033726	RBFOX1	100	63.043	ENSSBOG00000028291	RBFOX2	100	62.740
ENSSBOG00000033726	RBFOX1	79	78.000	ENSSBOG00000031591	RBFOX3	100	76.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000033726	RBFOX1	100	99.747	ENSG00000078328	RBFOX1	100	99.747	Homo_sapiens
ENSSBOG00000033726	RBFOX1	97	81.842	ENSAPOG00000003197	rbfox1	98	81.890	Acanthochromis_polyacanthus
ENSSBOG00000033726	RBFOX1	63	95.600	ENSAMEG00000008605	RBFOX1	100	95.600	Ailuropoda_melanoleuca
ENSSBOG00000033726	RBFOX1	64	71.747	ENSACIG00000005478	rbfox1	68	71.747	Amphilophus_citrinellus
ENSSBOG00000033726	RBFOX1	70	78.571	ENSAOCG00000008283	rbfox1	96	78.214	Amphiprion_ocellaris
ENSSBOG00000033726	RBFOX1	95	75.346	ENSAPEG00000010636	rbfox1	100	75.482	Amphiprion_percula
ENSSBOG00000033726	RBFOX1	70	76.761	ENSATEG00000007513	rbfox1	97	76.056	Anabas_testudineus
ENSSBOG00000033726	RBFOX1	98	94.373	ENSAPLG00000013263	RBFOX1	98	94.373	Anas_platyrhynchos
ENSSBOG00000033726	RBFOX1	98	87.374	ENSACAG00000004013	RBFOX1	99	87.374	Anolis_carolinensis
ENSSBOG00000033726	RBFOX1	100	99.804	ENSANAG00000029527	RBFOX1	100	99.785	Aotus_nancymaae
ENSSBOG00000033726	RBFOX1	58	89.041	ENSAMXG00000002431	rbfox1	64	89.041	Astyanax_mexicanus
ENSSBOG00000033726	RBFOX1	100	96.500	ENSBTAG00000007210	RBFOX1	100	96.500	Bos_taurus
ENSSBOG00000033726	RBFOX1	100	99.488	ENSCJAG00000017351	RBFOX1	100	99.488	Callithrix_jacchus
ENSSBOG00000033726	RBFOX1	100	98.987	ENSCAFG00000019082	RBFOX1	100	98.987	Canis_familiaris
ENSSBOG00000033726	RBFOX1	100	85.316	ENSCAFG00020024881	RBFOX1	99	85.570	Canis_lupus_dingo
ENSSBOG00000033726	RBFOX1	100	98.734	ENSCHIG00000023549	RBFOX1	100	98.734	Capra_hircus
ENSSBOG00000033726	RBFOX1	98	98.922	ENSTSYG00000005334	RBFOX1	100	99.133	Carlito_syrichta
ENSSBOG00000033726	RBFOX1	97	98.196	ENSCAPG00000017669	RBFOX1	100	98.196	Cavia_aperea
ENSSBOG00000033726	RBFOX1	98	97.449	ENSCPOG00000011314	RBFOX1	100	97.449	Cavia_porcellus
ENSSBOG00000033726	RBFOX1	100	99.467	ENSCCAG00000023031	RBFOX1	100	99.766	Cebus_capucinus
ENSSBOG00000033726	RBFOX1	100	99.747	ENSCATG00000033816	RBFOX1	100	99.488	Cercocebus_atys
ENSSBOG00000033726	RBFOX1	100	97.995	ENSCLAG00000012761	RBFOX1	100	97.995	Chinchilla_lanigera
ENSSBOG00000033726	RBFOX1	93	99.454	ENSCSAG00000008739	RBFOX1	97	99.454	Chlorocebus_sabaeus
ENSSBOG00000033726	RBFOX1	82	96.923	ENSCHOG00000012843	RBFOX1	74	96.923	Choloepus_hoffmanni
ENSSBOG00000033726	RBFOX1	100	92.500	ENSCPBG00000026626	RBFOX1	100	92.500	Chrysemys_picta_bellii
ENSSBOG00000033726	RBFOX1	100	99.488	ENSCANG00000033125	RBFOX1	100	99.488	Colobus_angolensis_palliatus
ENSSBOG00000033726	RBFOX1	98	96.692	ENSCGRG00001013729	Rbfox1	99	96.692	Cricetulus_griseus_chok1gshd
ENSSBOG00000033726	RBFOX1	98	96.692	ENSCGRG00000003272	Rbfox1	99	96.692	Cricetulus_griseus_crigri
ENSSBOG00000033726	RBFOX1	93	76.757	ENSCSEG00000008840	rbfox1	100	76.757	Cynoglossus_semilaevis
ENSSBOG00000033726	RBFOX1	97	87.879	ENSDARG00000014746	rbfox1	100	86.829	Danio_rerio
ENSSBOG00000033726	RBFOX1	97	98.458	ENSDNOG00000043612	RBFOX1	94	98.458	Dasypus_novemcinctus
ENSSBOG00000033726	RBFOX1	98	94.684	ENSDORG00000010024	Rbfox1	98	94.684	Dipodomys_ordii
ENSSBOG00000033726	RBFOX1	100	75.682	ENSETEG00000003771	RBFOX1	96	75.682	Echinops_telfairi
ENSSBOG00000033726	RBFOX1	100	99.241	ENSEASG00005011599	RBFOX1	100	99.241	Equus_asinus_asinus
ENSSBOG00000033726	RBFOX1	100	98.987	ENSECAG00000012667	RBFOX1	100	98.987	Equus_caballus
ENSSBOG00000033726	RBFOX1	100	53.846	ENSELUG00000013096	rbfox1	100	53.581	Esox_lucius
ENSSBOG00000033726	RBFOX1	100	98.734	ENSFCAG00000025322	RBFOX1	100	98.721	Felis_catus
ENSSBOG00000033726	RBFOX1	82	94.427	ENSFALG00000004027	RBFOX1	100	92.192	Ficedula_albicollis
ENSSBOG00000033726	RBFOX1	98	97.710	ENSFDAG00000007388	RBFOX1	99	97.710	Fukomys_damarensis
ENSSBOG00000033726	RBFOX1	96	93.668	ENSGALG00000034325	RBFOX1	100	93.668	Gallus_gallus
ENSSBOG00000033726	RBFOX1	100	92.658	ENSGAGG00000023681	RBFOX1	100	94.960	Gopherus_agassizii
ENSSBOG00000033726	RBFOX1	100	99.488	ENSGGOG00000016871	-	100	99.488	Gorilla_gorilla
ENSSBOG00000033726	RBFOX1	100	97.744	ENSHGLG00000016944	RBFOX1	100	97.744	Heterocephalus_glaber_female
ENSSBOG00000033726	RBFOX1	100	97.744	ENSHGLG00100003272	RBFOX1	100	97.744	Heterocephalus_glaber_male
ENSSBOG00000033726	RBFOX1	83	77.500	ENSHCOG00000016419	rbfox1	91	77.500	Hippocampus_comes
ENSSBOG00000033726	RBFOX1	93	90.286	ENSIPUG00000015215	rbfox1	100	90.286	Ictalurus_punctatus
ENSSBOG00000033726	RBFOX1	98	96.947	ENSSTOG00000000322	RBFOX1	99	96.947	Ictidomys_tridecemlineatus
ENSSBOG00000033726	RBFOX1	98	93.639	ENSJJAG00000002575	Rbfox1	99	93.639	Jaculus_jaculus
ENSSBOG00000033726	RBFOX1	98	76.903	ENSLBEG00000014659	rbfox1	97	79.076	Labrus_bergylta
ENSSBOG00000033726	RBFOX1	97	86.990	ENSLOCG00000006675	rbfox1	98	86.990	Lepisosteus_oculatus
ENSSBOG00000033726	RBFOX1	77	98.701	ENSLAFG00000011480	RBFOX1	100	98.701	Loxodonta_africana
ENSSBOG00000033726	RBFOX1	100	99.233	ENSMFAG00000036447	RBFOX1	100	99.233	Macaca_fascicularis
ENSSBOG00000033726	RBFOX1	100	99.233	ENSMMUG00000003458	RBFOX1	100	99.233	Macaca_mulatta
ENSSBOG00000033726	RBFOX1	100	99.239	ENSMNEG00000032034	RBFOX1	100	99.233	Macaca_nemestrina
ENSSBOG00000033726	RBFOX1	100	99.488	ENSMLEG00000015382	RBFOX1	100	99.550	Mandrillus_leucophaeus
ENSSBOG00000033726	RBFOX1	93	81.096	ENSMAMG00000003142	rbfox1	100	81.644	Mastacembelus_armatus
ENSSBOG00000033726	RBFOX1	75	88.028	ENSMGAG00000008606	RBFOX1	98	88.811	Meleagris_gallopavo
ENSSBOG00000033726	RBFOX1	99	57.784	ENSMAUG00000020570	Rbfox1	99	57.256	Mesocricetus_auratus
ENSSBOG00000033726	RBFOX1	100	98.987	ENSMICG00000034286	RBFOX1	100	98.987	Microcebus_murinus
ENSSBOG00000033726	RBFOX1	98	96.692	ENSMOCG00000020932	Rbfox1	100	97.656	Microtus_ochrogaster
ENSSBOG00000033726	RBFOX1	84	77.987	ENSMMOG00000009716	rbfox1	86	78.846	Mola_mola
ENSSBOG00000033726	RBFOX1	90	97.175	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSSBOG00000033726	RBFOX1	97	81.915	ENSMALG00000003337	rbfox1	98	81.600	Monopterus_albus
ENSSBOG00000033726	RBFOX1	98	96.947	MGP_CAROLIEiJ_G0020427	Rbfox1	99	96.947	Mus_caroli
ENSSBOG00000033726	RBFOX1	99	95.707	ENSMUSG00000008658	Rbfox1	100	97.586	Mus_musculus
ENSSBOG00000033726	RBFOX1	98	96.947	MGP_PahariEiJ_G0016135	Rbfox1	99	96.947	Mus_pahari
ENSSBOG00000033726	RBFOX1	98	96.438	MGP_SPRETEiJ_G0021321	Rbfox1	99	96.438	Mus_spretus
ENSSBOG00000033726	RBFOX1	100	98.223	ENSMPUG00000014822	RBFOX1	100	98.223	Mustela_putorius_furo
ENSSBOG00000033726	RBFOX1	77	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSSBOG00000033726	RBFOX1	97	98.196	ENSNGAG00000023276	Rbfox1	100	98.196	Nannospalax_galili
ENSSBOG00000033726	RBFOX1	100	61.667	ENSNBRG00000011084	rbfox1	98	61.667	Neolamprologus_brichardi
ENSSBOG00000033726	RBFOX1	100	98.667	ENSNLEG00000010017	-	100	98.667	Nomascus_leucogenys
ENSSBOG00000033726	RBFOX1	82	96.923	ENSMEUG00000012525	RBFOX1	74	96.923	Notamacropus_eugenii
ENSSBOG00000033726	RBFOX1	88	96.957	ENSOPRG00000006199	-	79	96.957	Ochotona_princeps
ENSSBOG00000033726	RBFOX1	98	97.436	ENSODEG00000013166	RBFOX1	99	96.947	Octodon_degus
ENSSBOG00000033726	RBFOX1	93	96.175	ENSOANG00000002379	RBFOX1	97	96.175	Ornithorhynchus_anatinus
ENSSBOG00000033726	RBFOX1	58	96.789	ENSOCUG00000001205	-	100	94.667	Oryctolagus_cuniculus
ENSSBOG00000033726	RBFOX1	98	97.964	ENSOGAG00000025535	RBFOX1	99	97.964	Otolemur_garnettii
ENSSBOG00000033726	RBFOX1	59	93.074	ENSOARG00000005135	RBFOX1	99	93.074	Ovis_aries
ENSSBOG00000033726	RBFOX1	100	99.488	ENSPPAG00000036238	-	100	99.727	Pan_paniscus
ENSSBOG00000033726	RBFOX1	100	98.721	ENSPPRG00000006546	RBFOX1	100	98.721	Panthera_pardus
ENSSBOG00000033726	RBFOX1	100	86.280	ENSPTIG00000021154	RBFOX1	99	87.332	Panthera_tigris_altaica
ENSSBOG00000033726	RBFOX1	100	99.488	ENSPTRG00000007744	RBFOX1	100	99.488	Pan_troglodytes
ENSSBOG00000033726	RBFOX1	100	99.488	ENSPANG00000026500	RBFOX1	100	99.488	Papio_anubis
ENSSBOG00000033726	RBFOX1	97	88.219	ENSPKIG00000009667	-	95	89.736	Paramormyrops_kingsleyae
ENSSBOG00000033726	RBFOX1	71	92.105	ENSPKIG00000019353	rbfox1	86	91.698	Paramormyrops_kingsleyae
ENSSBOG00000033726	RBFOX1	100	94.737	ENSPSIG00000006523	RBFOX1	100	94.737	Pelodiscus_sinensis
ENSSBOG00000033726	RBFOX1	98	96.947	ENSPEMG00000017607	Rbfox1	99	96.947	Peromyscus_maniculatus_bairdii
ENSSBOG00000033726	RBFOX1	72	94.014	ENSPCIG00000026887	RBFOX1	100	94.014	Phascolarctos_cinereus
ENSSBOG00000033726	RBFOX1	100	99.492	ENSPPYG00000007079	-	100	99.492	Pongo_abelii
ENSSBOG00000033726	RBFOX1	91	87.500	ENSPCAG00000002630	RBFOX1	95	87.500	Procavia_capensis
ENSSBOG00000033726	RBFOX1	100	98.977	ENSPCOG00000025687	RBFOX1	100	98.977	Propithecus_coquereli
ENSSBOG00000033726	RBFOX1	97	92.308	ENSPVAG00000013467	RBFOX1	93	92.308	Pteropus_vampyrus
ENSSBOG00000033726	RBFOX1	93	87.297	ENSPNAG00000023109	rbfox1	100	87.297	Pygocentrus_nattereri
ENSSBOG00000033726	RBFOX1	98	97.187	ENSRNOG00000002827	Rbfox1	97	97.820	Rattus_norvegicus
ENSSBOG00000033726	RBFOX1	97	98.969	ENSRBIG00000044478	RBFOX1	100	99.517	Rhinopithecus_bieti
ENSSBOG00000033726	RBFOX1	100	99.747	ENSRROG00000044411	RBFOX1	100	99.747	Rhinopithecus_roxellana
ENSSBOG00000033726	RBFOX1	97	93.299	ENSSHAG00000009257	RBFOX1	98	93.299	Sarcophilus_harrisii
ENSSBOG00000033726	RBFOX1	97	77.348	ENSSFOG00015023675	rbfox1	97	77.072	Scleropages_formosus
ENSSBOG00000033726	RBFOX1	89	74.709	ENSSFOG00015009955	-	87	74.709	Scleropages_formosus
ENSSBOG00000033726	RBFOX1	97	82.940	ENSSMAG00000015505	rbfox1	93	82.677	Scophthalmus_maximus
ENSSBOG00000033726	RBFOX1	97	80.435	ENSSDUG00000016413	rbfox1	99	80.548	Seriola_dumerili
ENSSBOG00000033726	RBFOX1	83	79.553	ENSSLDG00000009353	rbfox1	95	78.146	Seriola_lalandi_dorsalis
ENSSBOG00000033726	RBFOX1	83	90.415	ENSSPUG00000009732	RBFOX1	87	90.415	Sphenodon_punctatus
ENSSBOG00000033726	RBFOX1	100	78.836	ENSSPAG00000009723	rbfox1	100	81.530	Stegastes_partitus
ENSSBOG00000033726	RBFOX1	100	98.734	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSSBOG00000033726	RBFOX1	97	94.859	ENSTGUG00000004562	RBFOX1	100	94.859	Taeniopygia_guttata
ENSSBOG00000033726	RBFOX1	97	81.530	ENSTRUG00000020940	rbfox1	99	81.530	Takifugu_rubripes
ENSSBOG00000033726	RBFOX1	64	63.066	ENSTNIG00000002567	rbfox1	100	64.808	Tetraodon_nigroviridis
ENSSBOG00000033726	RBFOX1	66	100.000	ENSTBEG00000009169	-	60	100.000	Tupaia_belangeri
ENSSBOG00000033726	RBFOX1	97	96.410	ENSTTRG00000005700	RBFOX1	93	96.410	Tursiops_truncatus
ENSSBOG00000033726	RBFOX1	100	96.306	ENSUAMG00000024633	RBFOX1	100	96.306	Ursus_americanus
ENSSBOG00000033726	RBFOX1	100	87.071	ENSUMAG00000003579	RBFOX1	100	87.335	Ursus_maritimus
ENSSBOG00000033726	RBFOX1	77	96.429	ENSVPAG00000001284	RBFOX1	74	96.429	Vicugna_pacos
ENSSBOG00000033726	RBFOX1	98	98.210	ENSVVUG00000017311	RBFOX1	97	98.907	Vulpes_vulpes