EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000033746 (Gene tree)
Gene ID: 101045779
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 14307 bases
Position: chrJH378299.1:1408273-1422579
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000035204	TruB_N	PF01509.18	7.2e-20	1	1
ENSSBOP00000035204	PUA	PF01472.20	1.2e-17	1	1
ENSSBOP00000035204	DKCLD	PF08068.12	4.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000052133	DKC1-201	2501	XM_003943923	ENSSBOP00000035204	515 (aa)	XP_003943972	A0A2K6UTG6

Gene Model

Click here to download ENSSBOG00000033746's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000033746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000033746	DKC1	100	98.641	ENSG00000130826	DKC1	99	100.000	Homo_sapiens
ENSSBOG00000033746	DKC1	85	81.591	ENSAPOG00000007799	dkc1	84	81.591	Acanthochromis_polyacanthus
ENSSBOG00000033746	DKC1	89	95.197	ENSAMEG00000002776	DKC1	100	91.068	Ailuropoda_melanoleuca
ENSSBOG00000033746	DKC1	85	80.499	ENSACIG00000022614	dkc1	89	82.284	Amphilophus_citrinellus
ENSSBOG00000033746	DKC1	95	76.162	ENSAOCG00000013159	dkc1	86	80.365	Amphiprion_ocellaris
ENSSBOG00000033746	DKC1	95	76.162	ENSAPEG00000002284	dkc1	98	76.171	Amphiprion_percula
ENSSBOG00000033746	DKC1	85	78.125	ENSATEG00000013682	dkc1	85	78.125	Anabas_testudineus
ENSSBOG00000033746	DKC1	86	85.586	ENSACAG00000015600	DKC1	76	85.586	Anolis_carolinensis
ENSSBOG00000033746	DKC1	100	97.282	ENSANAG00000022732	DKC1	100	97.282	Aotus_nancymaae
ENSSBOG00000033746	DKC1	77	86.616	ENSACLG00000015605	dkc1	93	77.729	Astatotilapia_calliptera
ENSSBOG00000033746	DKC1	86	80.899	ENSAMXG00000017108	dkc1	88	78.755	Astyanax_mexicanus
ENSSBOG00000033746	DKC1	100	91.262	ENSBTAG00000013045	DKC1	97	91.952	Bos_taurus
ENSSBOG00000033746	DKC1	80	67.312	WBGene00010478	K01G5.5	98	65.068	Caenorhabditis_elegans
ENSSBOG00000033746	DKC1	100	98.643	ENSCJAG00000004210	DKC1	100	98.643	Callithrix_jacchus
ENSSBOG00000033746	DKC1	99	90.192	ENSCAFG00000019620	-	99	89.808	Canis_familiaris
ENSSBOG00000033746	DKC1	88	82.314	ENSCAFG00000009311	-	96	78.400	Canis_familiaris
ENSSBOG00000033746	DKC1	99	90.192	ENSCAFG00020008918	-	99	89.808	Canis_lupus_dingo
ENSSBOG00000033746	DKC1	88	82.159	ENSCAFG00020009379	-	93	78.068	Canis_lupus_dingo
ENSSBOG00000033746	DKC1	100	91.068	ENSCHIG00000017392	DKC1	100	90.680	Capra_hircus
ENSSBOG00000033746	DKC1	99	93.103	ENSTSYG00000007681	DKC1	99	93.103	Carlito_syrichta
ENSSBOG00000033746	DKC1	88	89.845	ENSCAPG00000003342	DKC1	99	93.563	Cavia_aperea
ENSSBOG00000033746	DKC1	99	93.333	ENSCPOG00000008825	DKC1	99	93.333	Cavia_porcellus
ENSSBOG00000033746	DKC1	100	90.485	ENSCCAG00000027418	DKC1	100	90.485	Cebus_capucinus
ENSSBOG00000033746	DKC1	100	97.864	ENSCATG00000033602	DKC1	100	97.864	Cercocebus_atys
ENSSBOG00000033746	DKC1	99	93.124	ENSCLAG00000000720	DKC1	96	94.082	Chinchilla_lanigera
ENSSBOG00000033746	DKC1	100	98.058	ENSCSAG00000006706	DKC1	100	98.058	Chlorocebus_sabaeus
ENSSBOG00000033746	DKC1	91	82.875	ENSCPBG00000005858	DKC1	93	87.045	Chrysemys_picta_bellii
ENSSBOG00000033746	DKC1	82	75.765	ENSCING00000004599	-	85	73.182	Ciona_intestinalis
ENSSBOG00000033746	DKC1	82	75.059	ENSCSAVG00000010047	-	96	74.596	Ciona_savignyi
ENSSBOG00000033746	DKC1	100	98.058	ENSCANG00000027987	DKC1	100	98.058	Colobus_angolensis_palliatus
ENSSBOG00000033746	DKC1	96	66.126	ENSCGRG00001016789	-	98	65.112	Cricetulus_griseus_chok1gshd
ENSSBOG00000033746	DKC1	100	91.456	ENSCGRG00001014574	-	100	91.456	Cricetulus_griseus_chok1gshd
ENSSBOG00000033746	DKC1	100	91.456	ENSCGRG00000016075	-	100	91.456	Cricetulus_griseus_crigri
ENSSBOG00000033746	DKC1	98	65.613	ENSCGRG00000014809	-	96	64.990	Cricetulus_griseus_crigri
ENSSBOG00000033746	DKC1	86	79.326	ENSCSEG00000012633	dkc1	94	79.730	Cynoglossus_semilaevis
ENSSBOG00000033746	DKC1	85	80.137	ENSCVAG00000010155	dkc1	83	80.365	Cyprinodon_variegatus
ENSSBOG00000033746	DKC1	77	86.216	ENSDARG00000016484	dkc1	87	80.045	Danio_rerio
ENSSBOG00000033746	DKC1	100	92.233	ENSDNOG00000004218	DKC1	100	92.233	Dasypus_novemcinctus
ENSSBOG00000033746	DKC1	58	82.667	ENSDORG00000013566	-	100	82.667	Dipodomys_ordii
ENSSBOG00000033746	DKC1	80	73.171	FBgn0259937	Nop60B	89	68.473	Drosophila_melanogaster
ENSSBOG00000033746	DKC1	95	86.762	ENSETEG00000016095	DKC1	99	86.762	Echinops_telfairi
ENSSBOG00000033746	DKC1	66	77.811	ENSEBUG00000015962	dkc1	99	81.911	Eptatretus_burgeri
ENSSBOG00000033746	DKC1	100	91.238	ENSEASG00005007484	DKC1	100	90.857	Equus_asinus_asinus
ENSSBOG00000033746	DKC1	100	91.238	ENSECAG00000023524	DKC1	100	90.857	Equus_caballus
ENSSBOG00000033746	DKC1	83	90.118	ENSEEUG00000003323	DKC1	99	90.118	Erinaceus_europaeus
ENSSBOG00000033746	DKC1	88	78.462	ENSELUG00000014538	dkc1	88	80.963	Esox_lucius
ENSSBOG00000033746	DKC1	100	91.650	ENSFCAG00000006577	DKC1	100	91.262	Felis_catus
ENSSBOG00000033746	DKC1	85	83.747	ENSFALG00000011496	DKC1	85	82.927	Ficedula_albicollis
ENSSBOG00000033746	DKC1	96	92.886	ENSFDAG00000002516	DKC1	100	92.157	Fukomys_damarensis
ENSSBOG00000033746	DKC1	85	80.272	ENSFHEG00000004627	dkc1	85	80.272	Fundulus_heteroclitus
ENSSBOG00000033746	DKC1	76	83.376	ENSGMOG00000017277	dkc1	100	83.376	Gadus_morhua
ENSSBOG00000033746	DKC1	85	86.239	ENSGALG00000005054	DKC1	84	85.682	Gallus_gallus
ENSSBOG00000033746	DKC1	85	80.455	ENSGAFG00000011486	dkc1	74	80.455	Gambusia_affinis
ENSSBOG00000033746	DKC1	77	87.121	ENSGACG00000004373	dkc1	96	88.754	Gasterosteus_aculeatus
ENSSBOG00000033746	DKC1	91	83.298	ENSGAGG00000011330	DKC1	89	84.946	Gopherus_agassizii
ENSSBOG00000033746	DKC1	100	98.641	ENSGGOG00000001045	DKC1	100	98.641	Gorilla_gorilla
ENSSBOG00000033746	DKC1	85	80.499	ENSHBUG00000012436	dkc1	86	80.499	Haplochromis_burtoni
ENSSBOG00000033746	DKC1	97	92.200	ENSHGLG00000000649	DKC1	100	91.892	Heterocephalus_glaber_female
ENSSBOG00000033746	DKC1	95	92.105	ENSHGLG00100001153	DKC1	100	91.797	Heterocephalus_glaber_male
ENSSBOG00000033746	DKC1	86	79.819	ENSHCOG00000021099	dkc1	86	80.272	Hippocampus_comes
ENSSBOG00000033746	DKC1	90	77.970	ENSIPUG00000010309	dkc1	88	77.802	Ictalurus_punctatus
ENSSBOG00000033746	DKC1	94	94.867	ENSSTOG00000001074	-	100	94.867	Ictidomys_tridecemlineatus
ENSSBOG00000033746	DKC1	99	85.294	ENSSTOG00000020149	-	99	84.902	Ictidomys_tridecemlineatus
ENSSBOG00000033746	DKC1	97	83.768	ENSSTOG00000011904	-	93	83.768	Ictidomys_tridecemlineatus
ENSSBOG00000033746	DKC1	58	84.000	ENSJJAG00000010086	-	100	84.000	Jaculus_jaculus
ENSSBOG00000033746	DKC1	86	78.781	ENSKMAG00000008010	dkc1	86	78.959	Kryptolebias_marmoratus
ENSSBOG00000033746	DKC1	85	80.638	ENSLBEG00000019122	dkc1	92	78.879	Labrus_bergylta
ENSSBOG00000033746	DKC1	87	81.960	ENSLACG00000014025	DKC1	91	88.693	Latimeria_chalumnae
ENSSBOG00000033746	DKC1	87	82.183	ENSLOCG00000013713	dkc1	88	84.491	Lepisosteus_oculatus
ENSSBOG00000033746	DKC1	96	91.751	ENSLAFG00000000221	DKC1	97	91.751	Loxodonta_africana
ENSSBOG00000033746	DKC1	100	97.864	ENSMFAG00000032398	DKC1	86	97.864	Macaca_fascicularis
ENSSBOG00000033746	DKC1	100	98.058	ENSMMUG00000005768	DKC1	100	98.058	Macaca_mulatta
ENSSBOG00000033746	DKC1	100	98.058	ENSMNEG00000034503	DKC1	100	98.058	Macaca_nemestrina
ENSSBOG00000033746	DKC1	100	98.058	ENSMLEG00000034422	DKC1	100	98.058	Mandrillus_leucophaeus
ENSSBOG00000033746	DKC1	79	84.841	ENSMAMG00000005427	dkc1	90	86.070	Mastacembelus_armatus
ENSSBOG00000033746	DKC1	85	80.726	ENSMZEG00005014503	dkc1	86	80.726	Maylandia_zebra
ENSSBOG00000033746	DKC1	77	86.432	ENSMGAG00000009238	DKC1	100	81.720	Meleagris_gallopavo
ENSSBOG00000033746	DKC1	58	83.333	ENSMAUG00000016454	-	100	83.333	Mesocricetus_auratus
ENSSBOG00000033746	DKC1	100	91.346	ENSMICG00000038751	-	100	91.346	Microcebus_murinus
ENSSBOG00000033746	DKC1	89	84.783	ENSMICG00000002818	-	99	84.783	Microcebus_murinus
ENSSBOG00000033746	DKC1	58	80.333	ENSMOCG00000001169	-	100	80.333	Microtus_ochrogaster
ENSSBOG00000033746	DKC1	77	86.364	ENSMMOG00000020348	dkc1	86	86.364	Mola_mola
ENSSBOG00000033746	DKC1	88	85.903	ENSMODG00000009243	DKC1	78	85.903	Monodelphis_domestica
ENSSBOG00000033746	DKC1	85	80.909	ENSMALG00000009454	dkc1	84	80.909	Monopterus_albus
ENSSBOG00000033746	DKC1	97	80.594	MGP_CAROLIEiJ_G0033191	Dkc1	100	91.892	Mus_caroli
ENSSBOG00000033746	DKC1	100	90.485	ENSMUSG00000031403	Dkc1	100	90.680	Mus_musculus
ENSSBOG00000033746	DKC1	97	90.744	MGP_PahariEiJ_G0031735	Dkc1	97	90.744	Mus_pahari
ENSSBOG00000033746	DKC1	100	90.291	MGP_SPRETEiJ_G0034351	Dkc1	100	91.262	Mus_spretus
ENSSBOG00000033746	DKC1	97	89.152	ENSMPUG00000016136	DKC1	93	90.533	Mustela_putorius_furo
ENSSBOG00000033746	DKC1	89	87.852	ENSMLUG00000011918	DKC1	97	84.356	Myotis_lucifugus
ENSSBOG00000033746	DKC1	58	83.333	ENSNGAG00000015724	-	100	83.333	Nannospalax_galili
ENSSBOG00000033746	DKC1	77	87.121	ENSNBRG00000005638	dkc1	80	87.121	Neolamprologus_brichardi
ENSSBOG00000033746	DKC1	100	98.447	ENSNLEG00000014323	DKC1	100	98.447	Nomascus_leucogenys
ENSSBOG00000033746	DKC1	82	86.052	ENSMEUG00000001066	DKC1	96	81.900	Notamacropus_eugenii
ENSSBOG00000033746	DKC1	96	74.390	ENSOPRG00000005248	DKC1	87	89.344	Ochotona_princeps
ENSSBOG00000033746	DKC1	58	84.667	ENSODEG00000000549	-	100	84.667	Octodon_degus
ENSSBOG00000033746	DKC1	85	95.413	ENSODEG00000011816	-	90	94.105	Octodon_degus
ENSSBOG00000033746	DKC1	86	81.900	ENSONIG00000013889	dkc1	86	81.900	Oreochromis_niloticus
ENSSBOG00000033746	DKC1	90	87.420	ENSOANG00000008713	-	96	87.420	Ornithorhynchus_anatinus
ENSSBOG00000033746	DKC1	66	64.507	ENSOANG00000022295	-	95	64.223	Ornithorhynchus_anatinus
ENSSBOG00000033746	DKC1	97	93.159	ENSOCUG00000012646	DKC1	100	92.621	Oryctolagus_cuniculus
ENSSBOG00000033746	DKC1	84	80.370	ENSORLG00000018748	dkc1	84	79.634	Oryzias_latipes
ENSSBOG00000033746	DKC1	78	84.615	ENSOMEG00000005786	dkc1	82	85.356	Oryzias_melastigma
ENSSBOG00000033746	DKC1	97	91.519	ENSOGAG00000003399	DKC1	97	91.913	Otolemur_garnettii
ENSSBOG00000033746	DKC1	100	90.097	ENSOARG00000003047	DKC1	100	89.709	Ovis_aries
ENSSBOG00000033746	DKC1	100	98.252	ENSPPAG00000023820	DKC1	100	98.252	Pan_paniscus
ENSSBOG00000033746	DKC1	89	95.435	ENSPPRG00000009104	DKC1	100	91.262	Panthera_pardus
ENSSBOG00000033746	DKC1	88	92.527	ENSPTIG00000017469	DKC1	99	88.627	Panthera_tigris_altaica
ENSSBOG00000033746	DKC1	99	98.039	ENSPTRG00000043416	-	86	98.039	Pan_troglodytes
ENSSBOG00000033746	DKC1	100	98.641	ENSPTRG00000022449	DKC1	100	98.641	Pan_troglodytes
ENSSBOG00000033746	DKC1	100	98.058	ENSPANG00000011978	DKC1	100	98.058	Papio_anubis
ENSSBOG00000033746	DKC1	93	75.975	ENSPKIG00000008443	dkc1	98	77.586	Paramormyrops_kingsleyae
ENSSBOG00000033746	DKC1	71	90.054	ENSPSIG00000013765	DKC1	86	92.997	Pelodiscus_sinensis
ENSSBOG00000033746	DKC1	77	82.323	ENSPMGG00000004097	dkc1	73	82.323	Periophthalmus_magnuspinnatus
ENSSBOG00000033746	DKC1	96	58.753	ENSPEMG00000013348	Dkc1	96	95.385	Peromyscus_maniculatus_bairdii
ENSSBOG00000033746	DKC1	87	87.751	ENSPCIG00000016706	DKC1	76	87.090	Phascolarctos_cinereus
ENSSBOG00000033746	DKC1	85	80.952	ENSPFOG00000018653	dkc1	86	80.952	Poecilia_formosa
ENSSBOG00000033746	DKC1	85	80.952	ENSPLAG00000003272	dkc1	77	80.952	Poecilia_latipinna
ENSSBOG00000033746	DKC1	85	80.952	ENSPMEG00000010413	dkc1	86	80.952	Poecilia_mexicana
ENSSBOG00000033746	DKC1	85	80.952	ENSPREG00000004100	dkc1	84	80.272	Poecilia_reticulata
ENSSBOG00000033746	DKC1	99	98.431	ENSPPYG00000020892	DKC1	100	98.431	Pongo_abelii
ENSSBOG00000033746	DKC1	72	94.638	ENSPCAG00000015034	DKC1	73	94.638	Procavia_capensis
ENSSBOG00000033746	DKC1	100	93.398	ENSPCOG00000026874	DKC1	96	94.556	Propithecus_coquereli
ENSSBOG00000033746	DKC1	97	89.940	ENSPVAG00000009222	DKC1	97	90.342	Pteropus_vampyrus
ENSSBOG00000033746	DKC1	85	79.775	ENSPNYG00000020063	dkc1	88	79.775	Pundamilia_nyererei
ENSSBOG00000033746	DKC1	90	80.172	ENSPNAG00000005780	dkc1	87	80.172	Pygocentrus_nattereri
ENSSBOG00000033746	DKC1	96	82.661	ENSRNOG00000055562	Dkc1	97	82.661	Rattus_norvegicus
ENSSBOG00000033746	DKC1	100	98.058	ENSRBIG00000028457	DKC1	86	98.058	Rhinopithecus_bieti
ENSSBOG00000033746	DKC1	100	98.058	ENSRROG00000044780	DKC1	100	98.058	Rhinopithecus_roxellana
ENSSBOG00000033746	DKC1	75	71.615	YLR175W	-	88	66.197	Saccharomyces_cerevisiae
ENSSBOG00000033746	DKC1	89	87.061	ENSSHAG00000002463	DKC1	96	87.061	Sarcophilus_harrisii
ENSSBOG00000033746	DKC1	99	74.566	ENSSFOG00015009585	dkc1	100	75.530	Scleropages_formosus
ENSSBOG00000033746	DKC1	86	80.180	ENSSMAG00000002552	dkc1	88	80.734	Scophthalmus_maximus
ENSSBOG00000033746	DKC1	85	81.922	ENSSDUG00000009963	dkc1	85	81.448	Seriola_dumerili
ENSSBOG00000033746	DKC1	91	77.612	ENSSLDG00000019342	dkc1	92	80.909	Seriola_lalandi_dorsalis
ENSSBOG00000033746	DKC1	95	83.197	ENSSARG00000001822	DKC1	96	82.992	Sorex_araneus
ENSSBOG00000033746	DKC1	84	86.270	ENSSPUG00000018907	DKC1	86	84.396	Sphenodon_punctatus
ENSSBOG00000033746	DKC1	86	79.864	ENSSPAG00000002585	dkc1	81	79.864	Stegastes_partitus
ENSSBOG00000033746	DKC1	100	89.544	ENSSSCG00000012823	DKC1	100	90.114	Sus_scrofa
ENSSBOG00000033746	DKC1	78	86.000	ENSTGUG00000006781	DKC1	89	85.500	Taeniopygia_guttata
ENSSBOG00000033746	DKC1	85	80.952	ENSTRUG00000004413	dkc1	86	80.952	Takifugu_rubripes
ENSSBOG00000033746	DKC1	91	63.202	ENSTNIG00000002582	dkc1	87	65.324	Tetraodon_nigroviridis
ENSSBOG00000033746	DKC1	71	90.959	ENSTBEG00000011262	DKC1	100	91.507	Tupaia_belangeri
ENSSBOG00000033746	DKC1	74	91.475	ENSTTRG00000008089	DKC1	74	91.475	Tursiops_truncatus
ENSSBOG00000033746	DKC1	95	91.751	ENSUAMG00000022721	DKC1	95	94.678	Ursus_americanus
ENSSBOG00000033746	DKC1	95	91.348	ENSUMAG00000016899	DKC1	100	92.927	Ursus_maritimus
ENSSBOG00000033746	DKC1	96	73.695	ENSVVUG00000021671	-	91	74.297	Vulpes_vulpes
ENSSBOG00000033746	DKC1	98	88.889	ENSVVUG00000020734	-	89	88.506	Vulpes_vulpes
ENSSBOG00000033746	DKC1	90	79.826	ENSXETG00000032517	DKC1	85	82.727	Xenopus_tropicalis
ENSSBOG00000033746	DKC1	85	79.638	ENSXCOG00000005498	dkc1	92	79.638	Xiphophorus_couchianus
ENSSBOG00000033746	DKC1	85	80.499	ENSXMAG00000004919	dkc1	86	80.499	Xiphophorus_maculatus