EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000034078 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 1029 bases
Position: chrJH378178.1:8240432-8241460
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000035870	RRM_1	PF00076.22	5e-22	1	2
ENSSBOP00000035870	RRM_1	PF00076.22	5e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000052802	-	954	-	ENSSBOP00000035870	317 (aa)	-	A0A2K6UVC3

Gene Model

Click here to download ENSSBOG00000034078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000034078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000034078	-	53	50.265	ENSSBOG00000030784	SRSF5	86	51.639
ENSSBOG00000034078	-	50	40.964	ENSSBOG00000025377	-	77	46.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000034078	-	54	61.202	ENSAMEG00000003710	SRSF6	93	60.248	Ailuropoda_melanoleuca
ENSSBOG00000034078	-	79	54.924	ENSACIG00000020091	-	95	63.566	Amphilophus_citrinellus
ENSSBOG00000034078	-	87	57.785	ENSACIG00000023658	-	55	71.751	Amphilophus_citrinellus
ENSSBOG00000034078	-	54	70.950	ENSAOCG00000004309	-	56	70.950	Amphiprion_ocellaris
ENSSBOG00000034078	-	54	67.935	ENSAPEG00000020746	-	64	68.478	Amphiprion_percula
ENSSBOG00000034078	-	54	70.492	ENSAPEG00000013086	-	53	72.283	Amphiprion_percula
ENSSBOG00000034078	-	54	69.832	ENSATEG00000007255	-	70	65.761	Anabas_testudineus
ENSSBOG00000034078	-	54	74.860	ENSACAG00000002061	SRSF6	51	75.138	Anolis_carolinensis
ENSSBOG00000034078	-	54	70.109	ENSAMXG00000042692	-	96	65.185	Astyanax_mexicanus
ENSSBOG00000034078	-	54	76.243	ENSBTAG00000008527	SRSF6	93	69.782	Bos_taurus
ENSSBOG00000034078	-	54	77.348	ENSCJAG00000048403	SRSF6	99	68.657	Callithrix_jacchus
ENSSBOG00000034078	-	54	76.243	ENSCAFG00000009289	SRSF6	93	69.470	Canis_familiaris
ENSSBOG00000034078	-	54	76.243	ENSCAFG00020013559	SRSF6	93	69.470	Canis_lupus_dingo
ENSSBOG00000034078	-	54	76.243	ENSCHIG00000015890	-	93	69.782	Capra_hircus
ENSSBOG00000034078	-	54	75.138	ENSCHIG00000009148	-	93	69.159	Capra_hircus
ENSSBOG00000034078	-	54	60.694	ENSTSYG00000026476	SRSF6	92	57.419	Carlito_syrichta
ENSSBOG00000034078	-	93	64.952	ENSCPOG00000011761	SRSF6	70	75.532	Cavia_porcellus
ENSSBOG00000034078	-	93	61.639	ENSCCAG00000018540	-	90	62.458	Cebus_capucinus
ENSSBOG00000034078	-	54	77.348	ENSCATG00000030794	SRSF6	93	71.473	Cercocebus_atys
ENSSBOG00000034078	-	54	77.348	ENSCLAG00000010247	SRSF6	94	71.340	Chinchilla_lanigera
ENSSBOG00000034078	-	54	77.348	ENSCSAG00000014022	SRSF6	93	71.473	Chlorocebus_sabaeus
ENSSBOG00000034078	-	54	73.370	ENSCPBG00000018200	SRSF6	93	62.928	Chrysemys_picta_bellii
ENSSBOG00000034078	-	54	76.796	ENSCANG00000037774	-	93	71.473	Colobus_angolensis_palliatus
ENSSBOG00000034078	-	54	61.765	ENSCANG00000042529	-	92	62.662	Colobus_angolensis_palliatus
ENSSBOG00000034078	-	54	76.796	ENSCGRG00001022339	Srsf6	94	70.846	Cricetulus_griseus_chok1gshd
ENSSBOG00000034078	-	54	62.755	ENSDARG00000016783	srsf6b	94	70.787	Danio_rerio
ENSSBOG00000034078	-	54	77.348	ENSDNOG00000008410	SRSF6	93	69.159	Dasypus_novemcinctus
ENSSBOG00000034078	-	54	77.348	ENSDORG00000028378	Srsf6	93	71.340	Dipodomys_ordii
ENSSBOG00000034078	-	54	72.778	ENSETEG00000006221	SRSF6	93	66.250	Echinops_telfairi
ENSSBOG00000034078	-	54	76.243	ENSEASG00005023429	SRSF6	93	65.625	Equus_asinus_asinus
ENSSBOG00000034078	-	54	76.243	ENSECAG00000023932	SRSF6	93	65.625	Equus_caballus
ENSSBOG00000034078	-	54	70.950	ENSELUG00000013506	SRSF6	74	74.699	Esox_lucius
ENSSBOG00000034078	-	54	71.196	ENSELUG00000024182	SRSF6	88	70.330	Esox_lucius
ENSSBOG00000034078	-	54	76.243	ENSFCAG00000032814	SRSF6	93	69.470	Felis_catus
ENSSBOG00000034078	-	54	60.694	ENSFDAG00000012191	SRSF6	92	61.613	Fukomys_damarensis
ENSSBOG00000034078	-	54	71.111	ENSFHEG00000023065	srsf6a	54	71.111	Fundulus_heteroclitus
ENSSBOG00000034078	-	53	61.905	ENSGMOG00000006105	srsf6a	62	61.905	Gadus_morhua
ENSSBOG00000034078	-	54	71.892	ENSGALG00000000990	SRSF6	93	61.963	Gallus_gallus
ENSSBOG00000034078	-	54	71.839	ENSGACG00000006084	srsf6a	52	69.399	Gasterosteus_aculeatus
ENSSBOG00000034078	-	54	73.370	ENSGAGG00000003238	SRSF6	93	62.928	Gopherus_agassizii
ENSSBOG00000034078	-	61	57.447	ENSHBUG00000006386	-	57	70.950	Haplochromis_burtoni
ENSSBOG00000034078	-	54	75.294	ENSHGLG00000007701	-	56	75.294	Heterocephalus_glaber_female
ENSSBOG00000034078	-	54	77.348	ENSHGLG00000007348	SRSF6	94	71.340	Heterocephalus_glaber_female
ENSSBOG00000034078	-	54	62.353	ENSHGLG00100005043	SRSF6	92	62.258	Heterocephalus_glaber_male
ENSSBOG00000034078	-	54	71.023	ENSHCOG00000002740	srsf6a	56	71.751	Hippocampus_comes
ENSSBOG00000034078	-	88	58.273	ENSKMAG00000011934	srsf6a	58	74.118	Kryptolebias_marmoratus
ENSSBOG00000034078	-	54	67.760	ENSLBEG00000007356	srsf6a	51	69.945	Labrus_bergylta
ENSSBOG00000034078	-	54	74.033	ENSLACG00000005466	SRSF6	62	66.667	Latimeria_chalumnae
ENSSBOG00000034078	-	54	77.348	ENSMFAG00000036925	SRSF6	93	71.473	Macaca_fascicularis
ENSSBOG00000034078	-	54	77.348	ENSMMUG00000006742	SRSF6	93	71.473	Macaca_mulatta
ENSSBOG00000034078	-	54	76.796	ENSMNEG00000038270	-	93	70.846	Macaca_nemestrina
ENSSBOG00000034078	-	54	76.796	ENSMNEG00000027392	-	93	71.160	Macaca_nemestrina
ENSSBOG00000034078	-	54	69.945	ENSMAMG00000017161	srsf6a	52	71.739	Mastacembelus_armatus
ENSSBOG00000034078	-	58	64.390	ENSMZEG00005008032	-	56	70.950	Maylandia_zebra
ENSSBOG00000034078	-	53	72.353	ENSMZEG00005020658	-	60	71.098	Maylandia_zebra
ENSSBOG00000034078	-	54	76.796	ENSMICG00000008537	SRSF6	93	70.093	Microcebus_murinus
ENSSBOG00000034078	-	54	75.824	ENSMODG00000003107	SRSF6	94	66.978	Monodelphis_domestica
ENSSBOG00000034078	-	54	76.796	MGP_CAROLIEiJ_G0024606	Srsf6	94	69.906	Mus_caroli
ENSSBOG00000034078	-	54	76.796	ENSMUSG00000016921	Srsf6	94	70.219	Mus_musculus
ENSSBOG00000034078	-	54	76.796	MGP_PahariEiJ_G0026050	Srsf6	94	69.906	Mus_pahari
ENSSBOG00000034078	-	54	76.796	MGP_SPRETEiJ_G0025528	Srsf6	94	70.219	Mus_spretus
ENSSBOG00000034078	-	54	76.243	ENSMPUG00000017692	SRSF6	63	77.348	Mustela_putorius_furo
ENSSBOG00000034078	-	54	55.789	ENSMLUG00000016618	SRSF6	93	58.642	Myotis_lucifugus
ENSSBOG00000034078	-	54	77.348	ENSNGAG00000017560	Srsf6	94	70.219	Nannospalax_galili
ENSSBOG00000034078	-	54	64.894	ENSNBRG00000014709	-	57	70.950	Neolamprologus_brichardi
ENSSBOG00000034078	-	54	75.824	ENSMEUG00000014615	SRSF6	100	66.667	Notamacropus_eugenii
ENSSBOG00000034078	-	54	67.760	ENSONIG00000020247	-	52	70.000	Oreochromis_niloticus
ENSSBOG00000034078	-	54	59.259	ENSOCUG00000009785	-	98	56.667	Oryctolagus_cuniculus
ENSSBOG00000034078	-	53	52.000	ENSOCUG00000023999	-	70	52.247	Oryctolagus_cuniculus
ENSSBOG00000034078	-	54	76.796	ENSOGAG00000014468	SRSF6	93	68.847	Otolemur_garnettii
ENSSBOG00000034078	-	54	70.000	ENSOARG00000003117	SRSF6	93	66.978	Ovis_aries
ENSSBOG00000034078	-	54	65.363	ENSPPAG00000043131	-	100	63.576	Pan_paniscus
ENSSBOG00000034078	-	54	76.243	ENSPPRG00000008917	SRSF6	93	69.470	Panthera_pardus
ENSSBOG00000034078	-	54	65.363	ENSPTRG00000046274	-	100	63.576	Pan_troglodytes
ENSSBOG00000034078	-	54	77.348	ENSPANG00000035224	SRSF6	93	71.473	Papio_anubis
ENSSBOG00000034078	-	89	59.609	ENSPKIG00000018463	-	80	76.543	Paramormyrops_kingsleyae
ENSSBOG00000034078	-	53	63.128	ENSPKIG00000015703	-	86	57.143	Paramormyrops_kingsleyae
ENSSBOG00000034078	-	88	59.672	ENSPMGG00000014963	srsf6a	54	72.928	Periophthalmus_magnuspinnatus
ENSSBOG00000034078	-	54	75.824	ENSPCIG00000003820	SRSF6	94	66.667	Phascolarctos_cinereus
ENSSBOG00000034078	-	54	67.935	ENSPLAG00000009243	srsf6a	80	63.780	Poecilia_latipinna
ENSSBOG00000034078	-	54	69.780	ENSPMEG00000006042	SRSF6	53	70.330	Poecilia_mexicana
ENSSBOG00000034078	-	54	76.243	ENSPCAG00000010954	SRSF6	94	67.823	Procavia_capensis
ENSSBOG00000034078	-	54	76.796	ENSPCOG00000026364	SRSF6	93	69.782	Propithecus_coquereli
ENSSBOG00000034078	-	54	75.138	ENSPVAG00000015232	SRSF6	93	68.339	Pteropus_vampyrus
ENSSBOG00000034078	-	54	64.894	ENSPNYG00000004944	-	57	70.950	Pundamilia_nyererei
ENSSBOG00000034078	-	54	76.796	ENSRNOG00000006380	Srsf6	94	70.219	Rattus_norvegicus
ENSSBOG00000034078	-	54	70.588	ENSRBIG00000041414	SRSF6	93	70.219	Rhinopithecus_bieti
ENSSBOG00000034078	-	54	77.348	ENSRROG00000029989	SRSF6	93	71.473	Rhinopithecus_roxellana
ENSSBOG00000034078	-	54	75.824	ENSSHAG00000012805	SRSF6	94	66.667	Sarcophilus_harrisii
ENSSBOG00000034078	-	55	66.327	ENSSFOG00015019681	-	52	66.495	Scleropages_formosus
ENSSBOG00000034078	-	54	72.778	ENSSFOG00015015169	SRSF6	59	72.778	Scleropages_formosus
ENSSBOG00000034078	-	54	62.105	ENSSMAG00000017447	-	55	66.667	Scophthalmus_maximus
ENSSBOG00000034078	-	54	69.945	ENSSDUG00000016097	srsf6a	52	71.739	Seriola_dumerili
ENSSBOG00000034078	-	54	75.978	ENSSPUG00000004967	SRSF6	93	65.409	Sphenodon_punctatus
ENSSBOG00000034078	-	96	51.097	ENSSPAG00000002362	srsf6a	50	71.739	Stegastes_partitus
ENSSBOG00000034078	-	54	76.243	ENSSSCG00000007362	SRSF6	96	68.166	Sus_scrofa
ENSSBOG00000034078	-	54	73.626	ENSTGUG00000003455	SRSF6	93	62.229	Taeniopygia_guttata
ENSSBOG00000034078	-	89	53.165	ENSTNIG00000001692	srsf6a	56	71.739	Tetraodon_nigroviridis
ENSSBOG00000034078	-	54	76.243	ENSUAMG00000003559	SRSF6	93	69.470	Ursus_americanus
ENSSBOG00000034078	-	54	70.391	ENSXMAG00000021849	srsf6a	54	71.111	Xiphophorus_maculatus