EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000034497 (Gene tree)
Gene ID: 101052305
Gene Symbol: SYMPK
Alias: SPK|SYM
Full Name: symplekin
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 47814 bases
Position: chrJH378232.1:1256669-1304482
Accession: 22935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000037051	Symplekin_C	PF12295.8	9.2e-75	1	1
ENSSBOP00000037008	Symplekin_C	PF12295.8	6.9e-74	1	1
ENSSBOP00000037031	Symplekin_C	PF12295.8	7.1e-74	1	1
ENSSBOP00000037063	Symplekin_C	PF12295.8	3.7e-20	1	1
ENSSBOP00000037075	Symplekin_C	PF12295.8	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000053945	SYMPK-201	4190	XM_003940258	ENSSBOP00000037008	1271 (aa)	XP_003940307	A0A2K6UYP3
ENSSBOT00000053969	SYMPK-202	3918	-	ENSSBOP00000037031	1305 (aa)	-	A0A2K6UYN5
ENSSBOT00000053989	SYMPK-203	1857	-	ENSSBOP00000037051	618 (aa)	-	A0A2K6UYQ5
ENSSBOT00000054001	SYMPK-204	2277	-	ENSSBOP00000037063	758 (aa)	-	A0A2K6UYU4
ENSSBOT00000054013	SYMPK-205	3117	-	ENSSBOP00000037075	1039 (aa)	-	A0A2K6UYT2
ENSSBOT00000054021	SYMPK-206	765	-	ENSSBOP00000037083	254 (aa)	-	A0A2K6UYW0

Gene Model

Click here to download ENSSBOG00000034497's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03015	mRNA surveillance pathway	KEGG
sbq04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000034497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000034497	SYMPK	100	99.200	ENSG00000125755	SYMPK	100	99.296	Homo_sapiens
ENSSBOG00000034497	SYMPK	95	73.735	ENSAPOG00000015934	sympk	97	73.870	Acanthochromis_polyacanthus
ENSSBOG00000034497	SYMPK	100	98.400	ENSAMEG00000000680	SYMPK	100	97.327	Ailuropoda_melanoleuca
ENSSBOG00000034497	SYMPK	95	73.670	ENSACIG00000006357	sympk	92	74.635	Amphilophus_citrinellus
ENSSBOG00000034497	SYMPK	95	73.379	ENSAOCG00000024124	sympk	92	75.256	Amphiprion_ocellaris
ENSSBOG00000034497	SYMPK	95	73.288	ENSAPEG00000003465	sympk	90	74.211	Amphiprion_percula
ENSSBOG00000034497	SYMPK	95	73.931	ENSATEG00000008472	sympk	91	74.350	Anabas_testudineus
ENSSBOG00000034497	SYMPK	95	85.241	ENSACAG00000004126	SYMPK	97	79.897	Anolis_carolinensis
ENSSBOG00000034497	SYMPK	100	100.000	ENSANAG00000021087	SYMPK	100	100.000	Aotus_nancymaae
ENSSBOG00000034497	SYMPK	95	73.562	ENSACLG00000001813	sympk	91	74.417	Astatotilapia_calliptera
ENSSBOG00000034497	SYMPK	95	72.851	ENSAMXG00000013677	sympk	91	74.441	Astyanax_mexicanus
ENSSBOG00000034497	SYMPK	100	97.013	ENSBTAG00000012101	SYMPK	100	97.013	Bos_taurus
ENSSBOG00000034497	SYMPK	87	31.948	WBGene00017797	symk-1	80	30.541	Caenorhabditis_elegans
ENSSBOG00000034497	SYMPK	100	100.000	ENSCJAG00000012172	SYMPK	99	97.648	Callithrix_jacchus
ENSSBOG00000034497	SYMPK	100	97.416	ENSCAFG00000004376	SYMPK	100	97.416	Canis_familiaris
ENSSBOG00000034497	SYMPK	100	97.416	ENSCAFG00020001815	SYMPK	100	97.416	Canis_lupus_dingo
ENSSBOG00000034497	SYMPK	100	97.170	ENSCHIG00000026784	SYMPK	100	97.170	Capra_hircus
ENSSBOG00000034497	SYMPK	100	98.400	ENSTSYG00000006268	SYMPK	99	96.873	Carlito_syrichta
ENSSBOG00000034497	SYMPK	93	96.596	ENSCAPG00000005112	SYMPK	96	95.403	Cavia_aperea
ENSSBOG00000034497	SYMPK	100	98.400	ENSCPOG00000010434	SYMPK	100	91.797	Cavia_porcellus
ENSSBOG00000034497	SYMPK	100	100.000	ENSCCAG00000036309	SYMPK	100	100.000	Cebus_capucinus
ENSSBOG00000034497	SYMPK	100	99.200	ENSCATG00000045107	SYMPK	100	99.200	Cercocebus_atys
ENSSBOG00000034497	SYMPK	100	99.200	ENSCLAG00000001206	SYMPK	100	97.013	Chinchilla_lanigera
ENSSBOG00000034497	SYMPK	100	99.200	ENSCSAG00000003115	SYMPK	100	98.666	Chlorocebus_sabaeus
ENSSBOG00000034497	SYMPK	73	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSSBOG00000034497	SYMPK	100	88.095	ENSCPBG00000007170	SYMPK	98	84.578	Chrysemys_picta_bellii
ENSSBOG00000034497	SYMPK	95	46.259	ENSCING00000021232	-	96	48.870	Ciona_intestinalis
ENSSBOG00000034497	SYMPK	95	44.667	ENSCSAVG00000005154	-	100	47.883	Ciona_savignyi
ENSSBOG00000034497	SYMPK	100	99.200	ENSCANG00000040907	SYMPK	100	99.200	Colobus_angolensis_palliatus
ENSSBOG00000034497	SYMPK	100	98.400	ENSCGRG00001010086	Sympk	100	91.436	Cricetulus_griseus_chok1gshd
ENSSBOG00000034497	SYMPK	95	74.074	ENSCSEG00000016802	sympk	89	75.207	Cynoglossus_semilaevis
ENSSBOG00000034497	SYMPK	73	82.262	ENSCVAG00000015093	sympk	81	82.080	Cyprinodon_variegatus
ENSSBOG00000034497	SYMPK	95	72.428	ENSDARG00000059553	sympk	88	74.182	Danio_rerio
ENSSBOG00000034497	SYMPK	99	96.123	ENSDNOG00000016149	SYMPK	98	96.123	Dasypus_novemcinctus
ENSSBOG00000034497	SYMPK	96	34.853	FBgn0037371	Sym	95	36.729	Drosophila_melanogaster
ENSSBOG00000034497	SYMPK	50	95.541	ENSETEG00000015995	-	54	95.541	Echinops_telfairi
ENSSBOG00000034497	SYMPK	92	59.861	ENSEBUG00000000387	sympk	89	62.428	Eptatretus_burgeri
ENSSBOG00000034497	SYMPK	100	97.563	ENSEASG00005014227	SYMPK	100	97.563	Equus_asinus_asinus
ENSSBOG00000034497	SYMPK	100	97.563	ENSECAG00000008163	SYMPK	100	97.563	Equus_caballus
ENSSBOG00000034497	SYMPK	69	94.667	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
ENSSBOG00000034497	SYMPK	95	73.425	ENSELUG00000000850	sympk	94	71.993	Esox_lucius
ENSSBOG00000034497	SYMPK	100	98.927	ENSFCAG00000007337	SYMPK	100	97.567	Felis_catus
ENSSBOG00000034497	SYMPK	100	98.400	ENSFDAG00000011272	SYMPK	100	96.777	Fukomys_damarensis
ENSSBOG00000034497	SYMPK	95	73.626	ENSFHEG00000010274	sympk	90	74.932	Fundulus_heteroclitus
ENSSBOG00000034497	SYMPK	95	71.389	ENSGMOG00000002357	sympk	99	73.414	Gadus_morhua
ENSSBOG00000034497	SYMPK	95	74.725	ENSGAFG00000010976	sympk	89	75.666	Gambusia_affinis
ENSSBOG00000034497	SYMPK	95	73.003	ENSGACG00000002735	sympk	98	74.771	Gasterosteus_aculeatus
ENSSBOG00000034497	SYMPK	73	83.423	ENSGAGG00000012538	-	88	85.038	Gopherus_agassizii
ENSSBOG00000034497	SYMPK	100	99.200	ENSGGOG00000003410	SYMPK	100	97.746	Gorilla_gorilla
ENSSBOG00000034497	SYMPK	95	73.699	ENSHBUG00000023564	sympk	91	74.506	Haplochromis_burtoni
ENSSBOG00000034497	SYMPK	100	98.400	ENSHGLG00000005228	SYMPK	100	92.138	Heterocephalus_glaber_female
ENSSBOG00000034497	SYMPK	100	98.400	ENSHGLG00100018571	SYMPK	100	91.686	Heterocephalus_glaber_male
ENSSBOG00000034497	SYMPK	95	67.764	ENSHCOG00000017400	sympk	90	70.610	Hippocampus_comes
ENSSBOG00000034497	SYMPK	95	73.598	ENSIPUG00000024020	SYMPK	90	74.194	Ictalurus_punctatus
ENSSBOG00000034497	SYMPK	100	98.400	ENSSTOG00000001534	SYMPK	100	97.404	Ictidomys_tridecemlineatus
ENSSBOG00000034497	SYMPK	100	99.200	ENSJJAG00000006633	Sympk	100	95.067	Jaculus_jaculus
ENSSBOG00000034497	SYMPK	95	73.800	ENSKMAG00000016292	sympk	90	75.137	Kryptolebias_marmoratus
ENSSBOG00000034497	SYMPK	96	72.888	ENSLBEG00000027913	sympk	97	70.290	Labrus_bergylta
ENSSBOG00000034497	SYMPK	90	77.344	ENSLACG00000016497	SYMPK	100	71.770	Latimeria_chalumnae
ENSSBOG00000034497	SYMPK	100	96.863	ENSLAFG00000008726	SYMPK	100	96.863	Loxodonta_africana
ENSSBOG00000034497	SYMPK	80	96.988	ENSMFAG00000030093	-	90	96.988	Macaca_fascicularis
ENSSBOG00000034497	SYMPK	100	99.200	ENSMMUG00000015428	SYMPK	100	99.200	Macaca_mulatta
ENSSBOG00000034497	SYMPK	100	99.200	ENSMNEG00000019439	SYMPK	100	99.200	Macaca_nemestrina
ENSSBOG00000034497	SYMPK	100	99.200	ENSMLEG00000040508	SYMPK	100	99.200	Mandrillus_leucophaeus
ENSSBOG00000034497	SYMPK	95	73.288	ENSMAMG00000010486	sympk	89	75.023	Mastacembelus_armatus
ENSSBOG00000034497	SYMPK	95	73.562	ENSMZEG00005014146	sympk	91	74.417	Maylandia_zebra
ENSSBOG00000034497	SYMPK	95	97.649	ENSMAUG00000015657	Sympk	100	92.181	Mesocricetus_auratus
ENSSBOG00000034497	SYMPK	100	97.600	ENSMICG00000001871	SYMPK	100	97.600	Microcebus_murinus
ENSSBOG00000034497	SYMPK	100	93.843	ENSMOCG00000008388	Sympk	100	93.375	Microtus_ochrogaster
ENSSBOG00000034497	SYMPK	94	72.361	ENSMMOG00000019227	sympk	94	73.073	Mola_mola
ENSSBOG00000034497	SYMPK	95	92.276	ENSMODG00000021534	SYMPK	96	90.179	Monodelphis_domestica
ENSSBOG00000034497	SYMPK	96	73.124	ENSMALG00000008347	sympk	97	69.175	Monopterus_albus
ENSSBOG00000034497	SYMPK	100	99.200	MGP_CAROLIEiJ_G0029267	Sympk	100	93.687	Mus_caroli
ENSSBOG00000034497	SYMPK	100	99.200	ENSMUSG00000023118	Sympk	100	92.874	Mus_musculus
ENSSBOG00000034497	SYMPK	100	100.000	MGP_PahariEiJ_G0021127	Sympk	100	94.292	Mus_pahari
ENSSBOG00000034497	SYMPK	100	99.200	MGP_SPRETEiJ_G0030351	-	100	93.833	Mus_spretus
ENSSBOG00000034497	SYMPK	100	95.533	ENSMPUG00000005505	SYMPK	100	95.533	Mustela_putorius_furo
ENSSBOG00000034497	SYMPK	95	93.638	ENSMLUG00000001359	SYMPK	100	92.622	Myotis_lucifugus
ENSSBOG00000034497	SYMPK	100	99.200	ENSNGAG00000000820	Sympk	100	95.301	Nannospalax_galili
ENSSBOG00000034497	SYMPK	95	73.836	ENSNBRG00000018101	sympk	92	75.093	Neolamprologus_brichardi
ENSSBOG00000034497	SYMPK	100	99.200	ENSNLEG00000002369	SYMPK	100	84.977	Nomascus_leucogenys
ENSSBOG00000034497	SYMPK	80	91.228	ENSMEUG00000003866	SYMPK	81	91.228	Notamacropus_eugenii
ENSSBOG00000034497	SYMPK	100	94.053	ENSOPRG00000009967	SYMPK	100	93.818	Ochotona_princeps
ENSSBOG00000034497	SYMPK	99	98.400	ENSODEG00000007519	SYMPK	100	96.619	Octodon_degus
ENSSBOG00000034497	SYMPK	95	72.888	ENSONIG00000016802	sympk	95	74.704	Oreochromis_niloticus
ENSSBOG00000034497	SYMPK	96	97.397	ENSOCUG00000005511	SYMPK	92	96.748	Oryctolagus_cuniculus
ENSSBOG00000034497	SYMPK	96	74.588	ENSORLG00000015338	sympk	98	73.368	Oryzias_latipes
ENSSBOG00000034497	SYMPK	95	74.555	ENSORLG00020004402	sympk	91	75.091	Oryzias_latipes_hni
ENSSBOG00000034497	SYMPK	95	74.555	ENSORLG00015005712	sympk	91	75.181	Oryzias_latipes_hsok
ENSSBOG00000034497	SYMPK	95	73.973	ENSOMEG00000022561	sympk	90	75.276	Oryzias_melastigma
ENSSBOG00000034497	SYMPK	100	100.000	ENSOGAG00000013483	SYMPK	100	97.645	Otolemur_garnettii
ENSSBOG00000034497	SYMPK	100	91.790	ENSOARG00000010349	SYMPK	100	91.790	Ovis_aries
ENSSBOG00000034497	SYMPK	100	99.200	ENSPPAG00000043204	SYMPK	100	98.666	Pan_paniscus
ENSSBOG00000034497	SYMPK	100	97.567	ENSPPRG00000004282	SYMPK	100	97.567	Panthera_pardus
ENSSBOG00000034497	SYMPK	100	95.130	ENSPTIG00000015420	SYMPK	100	95.130	Panthera_tigris_altaica
ENSSBOG00000034497	SYMPK	100	99.200	ENSPTRG00000011169	SYMPK	100	98.666	Pan_troglodytes
ENSSBOG00000034497	SYMPK	100	99.200	ENSPANG00000019930	SYMPK	100	99.200	Papio_anubis
ENSSBOG00000034497	SYMPK	95	74.049	ENSPKIG00000017132	sympk	96	72.881	Paramormyrops_kingsleyae
ENSSBOG00000034497	SYMPK	100	94.072	ENSPEMG00000007564	Sympk	100	93.682	Peromyscus_maniculatus_bairdii
ENSSBOG00000034497	SYMPK	96	62.968	ENSPMAG00000004936	sympk	100	65.679	Petromyzon_marinus
ENSSBOG00000034497	SYMPK	95	92.138	ENSPCIG00000024476	SYMPK	99	87.881	Phascolarctos_cinereus
ENSSBOG00000034497	SYMPK	95	74.725	ENSPFOG00000001194	sympk	89	75.941	Poecilia_formosa
ENSSBOG00000034497	SYMPK	95	74.725	ENSPLAG00000012995	sympk	89	75.849	Poecilia_latipinna
ENSSBOG00000034497	SYMPK	95	74.588	ENSPMEG00000008099	sympk	89	75.849	Poecilia_mexicana
ENSSBOG00000034497	SYMPK	95	74.863	ENSPREG00000006176	sympk	89	75.849	Poecilia_reticulata
ENSSBOG00000034497	SYMPK	95	99.447	ENSPPYG00000010135	SYMPK	99	99.276	Pongo_abelii
ENSSBOG00000034497	SYMPK	100	97.980	ENSPCAG00000005182	SYMPK	94	91.081	Procavia_capensis
ENSSBOG00000034497	SYMPK	100	99.200	ENSPCOG00000023740	SYMPK	100	99.200	Propithecus_coquereli
ENSSBOG00000034497	SYMPK	97	96.284	ENSPVAG00000001355	SYMPK	100	96.284	Pteropus_vampyrus
ENSSBOG00000034497	SYMPK	95	73.562	ENSPNYG00000011455	sympk	90	74.596	Pundamilia_nyererei
ENSSBOG00000034497	SYMPK	95	74.180	ENSPNAG00000016505	sympk	89	75.312	Pygocentrus_nattereri
ENSSBOG00000034497	SYMPK	100	98.400	ENSRNOG00000014353	Sympk	100	93.765	Rattus_norvegicus
ENSSBOG00000034497	SYMPK	100	99.200	ENSRBIG00000040963	SYMPK	100	99.200	Rhinopithecus_bieti
ENSSBOG00000034497	SYMPK	100	99.200	ENSRROG00000024834	SYMPK	100	98.587	Rhinopithecus_roxellana
ENSSBOG00000034497	SYMPK	95	90.646	ENSSHAG00000003139	SYMPK	99	91.067	Sarcophilus_harrisii
ENSSBOG00000034497	SYMPK	95	74.321	ENSSFOG00015006974	sympk	90	76.093	Scleropages_formosus
ENSSBOG00000034497	SYMPK	95	73.288	ENSSMAG00000018130	sympk	71	75.208	Scophthalmus_maximus
ENSSBOG00000034497	SYMPK	95	73.525	ENSSDUG00000007092	sympk	91	74.550	Seriola_dumerili
ENSSBOG00000034497	SYMPK	95	73.525	ENSSLDG00000014774	sympk	96	72.374	Seriola_lalandi_dorsalis
ENSSBOG00000034497	SYMPK	73	92.308	ENSSARG00000004274	-	66	100.000	Sorex_araneus
ENSSBOG00000034497	SYMPK	95	86.226	ENSSPUG00000002789	SYMPK	96	82.306	Sphenodon_punctatus
ENSSBOG00000034497	SYMPK	95	73.525	ENSSPAG00000000854	sympk	90	74.639	Stegastes_partitus
ENSSBOG00000034497	SYMPK	100	97.563	ENSSSCG00000003093	SYMPK	100	97.563	Sus_scrofa
ENSSBOG00000034497	SYMPK	95	73.425	ENSTRUG00000010202	sympk	91	74.661	Takifugu_rubripes
ENSSBOG00000034497	SYMPK	95	73.425	ENSTNIG00000017855	sympk	98	73.694	Tetraodon_nigroviridis
ENSSBOG00000034497	SYMPK	88	94.805	ENSTBEG00000000454	SYMPK	88	94.805	Tupaia_belangeri
ENSSBOG00000034497	SYMPK	100	88.941	ENSTTRG00000014311	SYMPK	100	88.941	Tursiops_truncatus
ENSSBOG00000034497	SYMPK	100	98.400	ENSUAMG00000022272	SYMPK	100	94.349	Ursus_americanus
ENSSBOG00000034497	SYMPK	100	98.400	ENSUMAG00000023698	SYMPK	100	97.408	Ursus_maritimus
ENSSBOG00000034497	SYMPK	95	99.032	ENSVVUG00000003024	SYMPK	99	97.715	Vulpes_vulpes
ENSSBOG00000034497	SYMPK	95	73.836	ENSXETG00000024453	sympk	94	72.830	Xenopus_tropicalis
ENSSBOG00000034497	SYMPK	95	72.877	ENSXCOG00000015368	sympk	100	74.468	Xiphophorus_couchianus
ENSSBOG00000034497	SYMPK	95	74.588	ENSXMAG00000005737	sympk	90	75.181	Xiphophorus_maculatus