EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000034503 (Gene tree)
Gene ID: 101053280
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 79437 bases
Position: chrJH378239.1:4760530-4839966
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000036759	SpoU_methylase	PF00588.19	7.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000053694	TARBP1-201	4203	XM_003940804	ENSSBOP00000036759	1400 (aa)	XP_003940853	A0A2K6UY23

Gene Model

Click here to download ENSSBOG00000034503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000034503's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000034503	TARBP1	100	93.424	ENSG00000059588	TARBP1	91	93.424	Homo_sapiens
ENSSBOG00000034503	TARBP1	96	45.540	ENSAPOG00000016419	si:dkey-85a20.4	83	45.540	Acanthochromis_polyacanthus
ENSSBOG00000034503	TARBP1	97	84.934	ENSAMEG00000003359	TARBP1	99	84.934	Ailuropoda_melanoleuca
ENSSBOG00000034503	TARBP1	96	45.514	ENSATEG00000020266	si:dkey-85a20.4	83	45.402	Anabas_testudineus
ENSSBOG00000034503	TARBP1	97	67.348	ENSAPLG00000007666	TARBP1	99	68.137	Anas_platyrhynchos
ENSSBOG00000034503	TARBP1	96	62.592	ENSACAG00000001142	TARBP1	84	62.592	Anolis_carolinensis
ENSSBOG00000034503	TARBP1	100	94.235	ENSANAG00000022031	TARBP1	89	94.235	Aotus_nancymaae
ENSSBOG00000034503	TARBP1	99	88.372	ENSBTAG00000004517	TARBP1	89	85.377	Bos_taurus
ENSSBOG00000034503	TARBP1	100	96.526	ENSCJAG00000018155	TARBP1	88	96.526	Callithrix_jacchus
ENSSBOG00000034503	TARBP1	99	83.989	ENSCAFG00000011533	TARBP1	98	83.989	Canis_familiaris
ENSSBOG00000034503	TARBP1	99	93.478	ENSCAFG00020027141	TARBP1	89	84.906	Canis_lupus_dingo
ENSSBOG00000034503	TARBP1	99	86.047	ENSCHIG00000011437	TARBP1	87	84.655	Capra_hircus
ENSSBOG00000034503	TARBP1	94	88.015	ENSTSYG00000010382	TARBP1	97	87.863	Carlito_syrichta
ENSSBOG00000034503	TARBP1	91	68.833	ENSCAPG00000010831	TARBP1	99	68.833	Cavia_aperea
ENSSBOG00000034503	TARBP1	99	78.386	ENSCPOG00000013995	TARBP1	88	78.386	Cavia_porcellus
ENSSBOG00000034503	TARBP1	100	97.191	ENSCCAG00000037278	TARBP1	87	97.191	Cebus_capucinus
ENSSBOG00000034503	TARBP1	100	93.333	ENSCATG00000011754	TARBP1	91	92.699	Cercocebus_atys
ENSSBOG00000034503	TARBP1	99	75.877	ENSCLAG00000003655	TARBP1	99	75.877	Chinchilla_lanigera
ENSSBOG00000034503	TARBP1	92	95.179	ENSCSAG00000010100	TARBP1	100	95.179	Chlorocebus_sabaeus
ENSSBOG00000034503	TARBP1	86	76.768	ENSCPBG00000005587	TARBP1	83	76.768	Chrysemys_picta_bellii
ENSSBOG00000034503	TARBP1	97	95.196	ENSCANG00000034343	TARBP1	99	95.196	Colobus_angolensis_palliatus
ENSSBOG00000034503	TARBP1	99	78.280	ENSCGRG00001016690	Tarbp1	88	78.280	Cricetulus_griseus_chok1gshd
ENSSBOG00000034503	TARBP1	96	78.280	ENSCGRG00000016893	Tarbp1	92	78.280	Cricetulus_griseus_crigri
ENSSBOG00000034503	TARBP1	96	43.045	ENSCSEG00000005255	si:dkey-85a20.4	84	45.562	Cynoglossus_semilaevis
ENSSBOG00000034503	TARBP1	98	45.768	ENSDARG00000079055	si:dkey-85a20.4	99	53.713	Danio_rerio
ENSSBOG00000034503	TARBP1	99	86.985	ENSDNOG00000008637	TARBP1	86	86.985	Dasypus_novemcinctus
ENSSBOG00000034503	TARBP1	93	73.843	ENSDORG00000007984	Tarbp1	100	73.843	Dipodomys_ordii
ENSSBOG00000034503	TARBP1	99	87.906	ENSEASG00005000252	TARBP1	89	87.684	Equus_asinus_asinus
ENSSBOG00000034503	TARBP1	99	86.000	ENSECAG00000023673	TARBP1	89	87.527	Equus_caballus
ENSSBOG00000034503	TARBP1	95	45.316	ENSELUG00000012193	si:dkey-85a20.4	84	45.302	Esox_lucius
ENSSBOG00000034503	TARBP1	99	91.489	ENSFCAG00000014183	TARBP1	89	81.014	Felis_catus
ENSSBOG00000034503	TARBP1	93	68.175	ENSFALG00000013565	TARBP1	99	68.015	Ficedula_albicollis
ENSSBOG00000034503	TARBP1	92	75.707	ENSFDAG00000001308	TARBP1	99	75.707	Fukomys_damarensis
ENSSBOG00000034503	TARBP1	89	53.803	ENSFHEG00000007565	si:dkey-85a20.4	81	53.521	Fundulus_heteroclitus
ENSSBOG00000034503	TARBP1	96	43.210	ENSGMOG00000004549	si:dkey-85a20.4	98	43.065	Gadus_morhua
ENSSBOG00000034503	TARBP1	97	62.666	ENSGALG00000011000	TARBP1	84	62.666	Gallus_gallus
ENSSBOG00000034503	TARBP1	96	45.268	ENSGAFG00000007387	si:dkey-85a20.4	83	44.982	Gambusia_affinis
ENSSBOG00000034503	TARBP1	97	45.007	ENSGACG00000005865	si:dkey-85a20.4	97	44.823	Gasterosteus_aculeatus
ENSSBOG00000034503	TARBP1	97	72.459	ENSGAGG00000012102	TARBP1	87	72.459	Gopherus_agassizii
ENSSBOG00000034503	TARBP1	97	92.183	ENSGGOG00000022879	TARBP1	99	92.183	Gorilla_gorilla
ENSSBOG00000034503	TARBP1	96	46.657	ENSHBUG00000008877	si:dkey-85a20.4	83	46.584	Haplochromis_burtoni
ENSSBOG00000034503	TARBP1	99	79.275	ENSHGLG00000011592	TARBP1	88	79.275	Heterocephalus_glaber_female
ENSSBOG00000034503	TARBP1	99	76.276	ENSHGLG00100015169	TARBP1	99	76.276	Heterocephalus_glaber_male
ENSSBOG00000034503	TARBP1	95	44.118	ENSIPUG00000005249	si:dkey-85a20.4	81	44.068	Ictalurus_punctatus
ENSSBOG00000034503	TARBP1	99	76.255	ENSSTOG00000032291	TARBP1	99	75.877	Ictidomys_tridecemlineatus
ENSSBOG00000034503	TARBP1	99	71.508	ENSJJAG00000017840	Tarbp1	99	71.508	Jaculus_jaculus
ENSSBOG00000034503	TARBP1	73	47.193	ENSKMAG00000017546	si:dkey-85a20.4	71	47.460	Kryptolebias_marmoratus
ENSSBOG00000034503	TARBP1	75	50.400	ENSLBEG00000012132	si:dkey-85a20.4	74	50.400	Labrus_bergylta
ENSSBOG00000034503	TARBP1	96	56.062	ENSLACG00000004337	TARBP1	83	55.988	Latimeria_chalumnae
ENSSBOG00000034503	TARBP1	96	51.322	ENSLOCG00000016214	si:dkey-85a20.4	83	51.175	Lepisosteus_oculatus
ENSSBOG00000034503	TARBP1	96	85.788	ENSLAFG00000011394	TARBP1	86	85.640	Loxodonta_africana
ENSSBOG00000034503	TARBP1	100	92.313	ENSMFAG00000041068	TARBP1	90	92.251	Macaca_fascicularis
ENSSBOG00000034503	TARBP1	100	92.239	ENSMMUG00000021703	TARBP1	89	92.177	Macaca_mulatta
ENSSBOG00000034503	TARBP1	100	95.196	ENSMNEG00000045002	TARBP1	89	95.196	Macaca_nemestrina
ENSSBOG00000034503	TARBP1	97	95.048	ENSMLEG00000044182	TARBP1	99	95.048	Mandrillus_leucophaeus
ENSSBOG00000034503	TARBP1	96	45.718	ENSMAMG00000021760	si:dkey-85a20.4	84	45.573	Mastacembelus_armatus
ENSSBOG00000034503	TARBP1	96	46.676	ENSMZEG00005005751	si:dkey-85a20.4	83	46.676	Maylandia_zebra
ENSSBOG00000034503	TARBP1	99	77.465	ENSMAUG00000020968	Tarbp1	89	77.465	Mesocricetus_auratus
ENSSBOG00000034503	TARBP1	99	93.478	ENSMICG00000015280	TARBP1	88	82.759	Microcebus_murinus
ENSSBOG00000034503	TARBP1	99	77.778	ENSMOCG00000004128	Tarbp1	91	75.179	Microtus_ochrogaster
ENSSBOG00000034503	TARBP1	95	44.184	ENSMMOG00000007795	si:dkey-85a20.4	82	43.997	Mola_mola
ENSSBOG00000034503	TARBP1	99	76.458	ENSMODG00000008504	TARBP1	86	76.310	Monodelphis_domestica
ENSSBOG00000034503	TARBP1	95	44.772	ENSMALG00000002916	si:dkey-85a20.4	83	44.923	Monopterus_albus
ENSSBOG00000034503	TARBP1	99	76.187	MGP_CAROLIEiJ_G0031729	Tarbp1	88	76.187	Mus_caroli
ENSSBOG00000034503	TARBP1	99	75.964	ENSMUSG00000090290	Tarbp1	88	75.964	Mus_musculus
ENSSBOG00000034503	TARBP1	99	77.778	MGP_PahariEiJ_G0023326	Tarbp1	88	76.427	Mus_pahari
ENSSBOG00000034503	TARBP1	99	76.261	MGP_SPRETEiJ_G0032846	Tarbp1	88	76.261	Mus_spretus
ENSSBOG00000034503	TARBP1	89	83.481	ENSMPUG00000002802	TARBP1	99	83.320	Mustela_putorius_furo
ENSSBOG00000034503	TARBP1	96	75.111	ENSMLUG00000002414	TARBP1	98	75.111	Myotis_lucifugus
ENSSBOG00000034503	TARBP1	100	93.996	ENSNLEG00000002518	TARBP1	91	93.996	Nomascus_leucogenys
ENSSBOG00000034503	TARBP1	62	77.331	ENSMEUG00000011370	-	54	77.331	Notamacropus_eugenii
ENSSBOG00000034503	TARBP1	80	86.545	ENSOPRG00000013822	TARBP1	69	86.545	Ochotona_princeps
ENSSBOG00000034503	TARBP1	99	84.091	ENSODEG00000005238	TARBP1	91	77.942	Octodon_degus
ENSSBOG00000034503	TARBP1	96	46.410	ENSONIG00000009789	si:dkey-85a20.4	97	46.338	Oreochromis_niloticus
ENSSBOG00000034503	TARBP1	100	87.755	ENSOCUG00000017418	TARBP1	89	83.405	Oryctolagus_cuniculus
ENSSBOG00000034503	TARBP1	96	43.282	ENSORLG00000010529	si:dkey-85a20.4	83	43.282	Oryzias_latipes
ENSSBOG00000034503	TARBP1	96	43.065	ENSORLG00020019264	si:dkey-85a20.4	83	43.065	Oryzias_latipes_hni
ENSSBOG00000034503	TARBP1	96	43.179	ENSORLG00015003276	si:dkey-85a20.4	83	43.179	Oryzias_latipes_hsok
ENSSBOG00000034503	TARBP1	99	84.553	ENSOGAG00000002379	TARBP1	88	84.553	Otolemur_garnettii
ENSSBOG00000034503	TARBP1	99	86.957	ENSOARG00000003434	TARBP1	93	84.456	Ovis_aries
ENSSBOG00000034503	TARBP1	97	95.713	ENSPPAG00000028097	TARBP1	99	95.713	Pan_paniscus
ENSSBOG00000034503	TARBP1	99	91.489	ENSPPRG00000013561	TARBP1	92	81.905	Panthera_pardus
ENSSBOG00000034503	TARBP1	96	85.342	ENSPTIG00000009281	TARBP1	99	85.342	Panthera_tigris_altaica
ENSSBOG00000034503	TARBP1	100	93.281	ENSPTRG00000002124	TARBP1	89	95.565	Pan_troglodytes
ENSSBOG00000034503	TARBP1	100	92.985	ENSPANG00000021933	TARBP1	91	92.985	Papio_anubis
ENSSBOG00000034503	TARBP1	97	47.338	ENSPKIG00000016716	si:dkey-85a20.4	83	47.266	Paramormyrops_kingsleyae
ENSSBOG00000034503	TARBP1	92	70.543	ENSPSIG00000010699	TARBP1	100	70.411	Pelodiscus_sinensis
ENSSBOG00000034503	TARBP1	99	76.492	ENSPEMG00000006888	Tarbp1	95	76.492	Peromyscus_maniculatus_bairdii
ENSSBOG00000034503	TARBP1	90	82.039	ENSPCIG00000029710	TARBP1	85	82.039	Phascolarctos_cinereus
ENSSBOG00000034503	TARBP1	96	45.243	ENSPFOG00000013020	si:dkey-85a20.4	96	45.033	Poecilia_formosa
ENSSBOG00000034503	TARBP1	96	45.581	ENSPLAG00000006044	si:dkey-85a20.4	83	45.295	Poecilia_latipinna
ENSSBOG00000034503	TARBP1	96	45.541	ENSPMEG00000017857	si:dkey-85a20.4	83	45.255	Poecilia_mexicana
ENSSBOG00000034503	TARBP1	96	45.806	ENSPREG00000022753	si:dkey-85a20.4	83	45.521	Poecilia_reticulata
ENSSBOG00000034503	TARBP1	90	96.123	ENSPPYG00000000102	TARBP1	90	96.123	Pongo_abelii
ENSSBOG00000034503	TARBP1	83	92.000	ENSPCAG00000004808	TARBP1	75	92.000	Procavia_capensis
ENSSBOG00000034503	TARBP1	99	84.857	ENSPCOG00000005666	TARBP1	91	84.929	Propithecus_coquereli
ENSSBOG00000034503	TARBP1	99	72.414	ENSPVAG00000014798	TARBP1	87	72.414	Pteropus_vampyrus
ENSSBOG00000034503	TARBP1	96	45.368	ENSPNYG00000019135	si:dkey-85a20.4	83	45.441	Pundamilia_nyererei
ENSSBOG00000034503	TARBP1	99	71.291	ENSRNOG00000053574	Tarbp1	89	71.291	Rattus_norvegicus
ENSSBOG00000034503	TARBP1	99	86.481	ENSRBIG00000043362	TARBP1	94	86.338	Rhinopithecus_bieti
ENSSBOG00000034503	TARBP1	100	93.333	ENSRROG00000029527	TARBP1	95	92.913	Rhinopithecus_roxellana
ENSSBOG00000034503	TARBP1	96	75.534	ENSSHAG00000000013	TARBP1	100	75.534	Sarcophilus_harrisii
ENSSBOG00000034503	TARBP1	96	46.109	ENSSFOG00015002660	si:dkey-85a20.4	97	46.771	Scleropages_formosus
ENSSBOG00000034503	TARBP1	96	45.876	ENSSMAG00000007081	si:dkey-85a20.4	82	46.204	Scophthalmus_maximus
ENSSBOG00000034503	TARBP1	96	44.461	ENSSDUG00000023566	si:dkey-85a20.4	83	44.428	Seriola_dumerili
ENSSBOG00000034503	TARBP1	96	46.426	ENSSLDG00000020200	si:dkey-85a20.4	83	46.387	Seriola_lalandi_dorsalis
ENSSBOG00000034503	TARBP1	92	85.253	ENSSARG00000012207	TARBP1	82	85.253	Sorex_araneus
ENSSBOG00000034503	TARBP1	99	67.312	ENSSPUG00000015364	TARBP1	91	67.120	Sphenodon_punctatus
ENSSBOG00000034503	TARBP1	96	46.198	ENSSPAG00000007213	si:dkey-85a20.4	83	45.942	Stegastes_partitus
ENSSBOG00000034503	TARBP1	95	90.419	ENSSSCG00000010160	TARBP1	88	89.937	Sus_scrofa
ENSSBOG00000034503	TARBP1	93	68.296	ENSTGUG00000010214	TARBP1	100	68.296	Taeniopygia_guttata
ENSSBOG00000034503	TARBP1	96	45.069	ENSTNIG00000016586	si:dkey-85a20.4	99	45.069	Tetraodon_nigroviridis
ENSSBOG00000034503	TARBP1	94	82.353	ENSTTRG00000008707	TARBP1	88	82.353	Tursiops_truncatus
ENSSBOG00000034503	TARBP1	95	84.488	ENSUMAG00000006730	TARBP1	99	84.488	Ursus_maritimus
ENSSBOG00000034503	TARBP1	83	92.708	ENSVPAG00000007665	TARBP1	80	92.708	Vicugna_pacos
ENSSBOG00000034503	TARBP1	99	84.211	ENSVVUG00000007460	TARBP1	96	85.451	Vulpes_vulpes
ENSSBOG00000034503	TARBP1	96	56.713	ENSXETG00000016224	tarbp1	99	56.640	Xenopus_tropicalis
ENSSBOG00000034503	TARBP1	87	48.844	ENSXCOG00000011779	si:dkey-85a20.4	90	48.707	Xiphophorus_couchianus
ENSSBOG00000034503	TARBP1	75	43.592	ENSXMAG00000009600	si:dkey-85a20.4	100	43.218	Xiphophorus_maculatus