EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000034726 (Gene tree)
Gene ID: 101034109
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 204229 bases
Position: chrJH378135.1:21322016-21526244
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000037415	RNA_bind	PF08675.11	1.1e-33	1	1
ENSSBOP00000037414	RNA_bind	PF08675.11	1.5e-33	1	1
ENSSBOP00000037419	RNA_bind	PF08675.11	1.5e-33	1	1
ENSSBOP00000037411	RNA_bind	PF08675.11	1.5e-33	1	1
ENSSBOP00000037397	RNA_bind	PF08675.11	1.6e-33	1	1
ENSSBOP00000037397	CAF1	PF04857.20	1.3e-89	1	1
ENSSBOP00000037419	CAF1	PF04857.20	2.6e-81	1	1
ENSSBOP00000037411	CAF1	PF04857.20	2.6e-81	1	1
ENSSBOP00000037414	CAF1	PF04857.20	5.2e-68	1	2
ENSSBOP00000037414	CAF1	PF04857.20	5.2e-68	2	2
ENSSBOP00000037415	CAF1	PF04857.20	1.9e-52	1	2
ENSSBOP00000037415	CAF1	PF04857.20	1.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000054355	PARN-204	1395	-	ENSSBOP00000037415	464 (aa)	-	A0A2K6UZR9
ENSSBOT00000054354	PARN-203	1743	-	ENSSBOP00000037414	580 (aa)	-	A0A2K6UZX4
ENSSBOT00000054351	PARN-202	1860	-	ENSSBOP00000037411	619 (aa)	-	A0A2K6UZS0
ENSSBOT00000054336	PARN-201	3030	XM_010339404	ENSSBOP00000037397	626 (aa)	XP_010337706	A0A2K6UZQ0
ENSSBOT00000054358	PARN-205	1848	-	ENSSBOP00000037419	615 (aa)	-	A0A2K6UZX7

Gene Model

Click here to download ENSSBOG00000034726's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000034726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000034726	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSSBOG00000034726	PARN	100	96.610	ENSAMEG00000011208	PARN	100	90.781	Ailuropoda_melanoleuca
ENSSBOG00000034726	PARN	77	82.508	ENSACIG00000000619	parn	83	74.813	Amphilophus_citrinellus
ENSSBOG00000034726	PARN	94	77.966	ENSAOCG00000003465	parn	84	71.912	Amphiprion_ocellaris
ENSSBOG00000034726	PARN	74	75.891	ENSAPEG00000010661	parn	91	75.891	Amphiprion_percula
ENSSBOG00000034726	PARN	87	76.271	ENSATEG00000004661	parn	83	73.116	Anabas_testudineus
ENSSBOG00000034726	PARN	99	87.037	ENSAPLG00000013914	PARN	99	82.492	Anas_platyrhynchos
ENSSBOG00000034726	PARN	100	89.831	ENSACAG00000004973	PARN	100	78.462	Anolis_carolinensis
ENSSBOG00000034726	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSSBOG00000034726	PARN	94	77.966	ENSACLG00000004742	parn	85	72.513	Astatotilapia_calliptera
ENSSBOG00000034726	PARN	86	79.661	ENSAMXG00000012390	parn	92	72.954	Astyanax_mexicanus
ENSSBOG00000034726	PARN	100	98.305	ENSBTAG00000018097	PARN	100	91.176	Bos_taurus
ENSSBOG00000034726	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSSBOG00000034726	PARN	100	94.915	ENSCAFG00000018795	PARN	100	90.923	Canis_familiaris
ENSSBOG00000034726	PARN	100	96.610	ENSCAFG00020024126	PARN	100	90.923	Canis_lupus_dingo
ENSSBOG00000034726	PARN	100	98.305	ENSCHIG00000018143	PARN	100	91.862	Capra_hircus
ENSSBOG00000034726	PARN	60	77.500	ENSCAPG00000007984	PARN	78	63.539	Cavia_aperea
ENSSBOG00000034726	PARN	100	98.305	ENSCPOG00000002263	PARN	100	88.732	Cavia_porcellus
ENSSBOG00000034726	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSSBOG00000034726	PARN	90	97.561	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSSBOG00000034726	PARN	100	96.610	ENSCLAG00000015406	PARN	99	88.889	Chinchilla_lanigera
ENSSBOG00000034726	PARN	100	100.000	ENSCSAG00000008142	PARN	100	96.557	Chlorocebus_sabaeus
ENSSBOG00000034726	PARN	98	98.077	ENSCHOG00000007014	PARN	100	74.525	Choloepus_hoffmanni
ENSSBOG00000034726	PARN	89	82.264	ENSCPBG00000006609	PARN	97	83.054	Chrysemys_picta_bellii
ENSSBOG00000034726	PARN	80	43.715	ENSCING00000010142	-	99	43.715	Ciona_intestinalis
ENSSBOG00000034726	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSSBOG00000034726	PARN	100	96.610	ENSCGRG00001012096	Parn	100	83.645	Cricetulus_griseus_chok1gshd
ENSSBOG00000034726	PARN	100	96.610	ENSCGRG00000004939	Parn	100	83.645	Cricetulus_griseus_crigri
ENSSBOG00000034726	PARN	94	79.661	ENSCSEG00000002064	parn	98	61.468	Cynoglossus_semilaevis
ENSSBOG00000034726	PARN	87	77.966	ENSCVAG00000014848	parn	83	71.747	Cyprinodon_variegatus
ENSSBOG00000034726	PARN	100	71.186	ENSDARG00000102634	parn	100	63.070	Danio_rerio
ENSSBOG00000034726	PARN	100	98.305	ENSDNOG00000000833	PARN	100	91.080	Dasypus_novemcinctus
ENSSBOG00000034726	PARN	74	89.734	ENSETEG00000014828	-	78	89.734	Echinops_telfairi
ENSSBOG00000034726	PARN	76	52.661	ENSEBUG00000007052	PARN	70	71.429	Eptatretus_burgeri
ENSSBOG00000034726	PARN	55	30.861	ENSEBUG00000008118	PNLDC1	61	30.861	Eptatretus_burgeri
ENSSBOG00000034726	PARN	100	98.305	ENSEASG00005011400	PARN	100	91.236	Equus_asinus_asinus
ENSSBOG00000034726	PARN	100	96.610	ENSECAG00000017792	PARN	100	91.080	Equus_caballus
ENSSBOG00000034726	PARN	84	96.610	ENSEEUG00000010370	PARN	76	94.444	Erinaceus_europaeus
ENSSBOG00000034726	PARN	88	79.661	ENSELUG00000013139	parn	77	70.946	Esox_lucius
ENSSBOG00000034726	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSSBOG00000034726	PARN	57	30.400	ENSFALG00000012081	PNLDC1	70	30.400	Ficedula_albicollis
ENSSBOG00000034726	PARN	98	88.462	ENSFALG00000003911	PARN	98	81.171	Ficedula_albicollis
ENSSBOG00000034726	PARN	100	98.305	ENSFDAG00000009234	PARN	100	88.263	Fukomys_damarensis
ENSSBOG00000034726	PARN	87	79.245	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSSBOG00000034726	PARN	83	75.000	ENSGMOG00000003231	parn	97	75.000	Gadus_morhua
ENSSBOG00000034726	PARN	100	91.525	ENSGALG00000003091	PARN	100	80.404	Gallus_gallus
ENSSBOG00000034726	PARN	86	79.661	ENSGAFG00000011061	parn	84	71.309	Gambusia_affinis
ENSSBOG00000034726	PARN	83	75.746	ENSGACG00000019501	parn	100	67.488	Gasterosteus_aculeatus
ENSSBOG00000034726	PARN	70	79.448	ENSGAGG00000023281	PARN	83	79.448	Gopherus_agassizii
ENSSBOG00000034726	PARN	96	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSSBOG00000034726	PARN	94	77.966	ENSHBUG00000017906	parn	90	77.612	Haplochromis_burtoni
ENSSBOG00000034726	PARN	100	98.305	ENSHGLG00000010886	PARN	100	88.576	Heterocephalus_glaber_female
ENSSBOG00000034726	PARN	100	98.305	ENSHGLG00100014659	PARN	100	88.576	Heterocephalus_glaber_male
ENSSBOG00000034726	PARN	82	72.023	ENSHCOG00000008683	parn	91	72.023	Hippocampus_comes
ENSSBOG00000034726	PARN	86	69.492	ENSIPUG00000012401	parn	84	64.613	Ictalurus_punctatus
ENSSBOG00000034726	PARN	100	96.610	ENSSTOG00000007519	PARN	100	89.671	Ictidomys_tridecemlineatus
ENSSBOG00000034726	PARN	100	98.305	ENSJJAG00000023049	Parn	100	86.072	Jaculus_jaculus
ENSSBOG00000034726	PARN	94	76.271	ENSKMAG00000009462	parn	84	72.184	Kryptolebias_marmoratus
ENSSBOG00000034726	PARN	88	77.966	ENSLBEG00000009167	parn	90	71.138	Labrus_bergylta
ENSSBOG00000034726	PARN	78	76.786	ENSLACG00000004207	PARN	100	75.000	Latimeria_chalumnae
ENSSBOG00000034726	PARN	96	81.356	ENSLOCG00000000715	parn	87	72.442	Lepisosteus_oculatus
ENSSBOG00000034726	PARN	100	98.305	ENSLAFG00000015036	PARN	100	91.393	Loxodonta_africana
ENSSBOG00000034726	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSSBOG00000034726	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSSBOG00000034726	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSSBOG00000034726	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSSBOG00000034726	PARN	89	77.966	ENSMAMG00000006939	parn	84	71.022	Mastacembelus_armatus
ENSSBOG00000034726	PARN	94	77.966	ENSMZEG00005013590	parn	90	75.746	Maylandia_zebra
ENSSBOG00000034726	PARN	94	100.000	ENSMGAG00000001004	PARN	95	80.424	Meleagris_gallopavo
ENSSBOG00000034726	PARN	95	94.286	ENSMAUG00000008025	Parn	100	78.154	Mesocricetus_auratus
ENSSBOG00000034726	PARN	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSSBOG00000034726	PARN	77	89.271	ENSMOCG00000022211	Parn	100	89.271	Microtus_ochrogaster
ENSSBOG00000034726	PARN	83	77.203	ENSMMOG00000011333	parn	87	77.203	Mola_mola
ENSSBOG00000034726	PARN	77	91.734	ENSMODG00000004915	PARN	99	91.734	Monodelphis_domestica
ENSSBOG00000034726	PARN	80	86.207	ENSMALG00000019426	parn	91	77.281	Monopterus_albus
ENSSBOG00000034726	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	84.351	Mus_caroli
ENSSBOG00000034726	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSSBOG00000034726	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	84.038	Mus_pahari
ENSSBOG00000034726	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	84.351	Mus_spretus
ENSSBOG00000034726	PARN	100	98.305	ENSMPUG00000014464	PARN	100	91.393	Mustela_putorius_furo
ENSSBOG00000034726	PARN	77	92.510	ENSMLUG00000005414	PARN	100	92.510	Myotis_lucifugus
ENSSBOG00000034726	PARN	83	77.905	ENSNBRG00000006805	parn	90	77.905	Neolamprologus_brichardi
ENSSBOG00000034726	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSSBOG00000034726	PARN	93	92.308	ENSMEUG00000008178	-	100	60.918	Notamacropus_eugenii
ENSSBOG00000034726	PARN	98	98.077	ENSOPRG00000012187	PARN	100	86.076	Ochotona_princeps
ENSSBOG00000034726	PARN	100	98.305	ENSODEG00000001617	PARN	100	82.862	Octodon_degus
ENSSBOG00000034726	PARN	100	77.966	ENSONIG00000000151	parn	100	68.462	Oreochromis_niloticus
ENSSBOG00000034726	PARN	82	82.677	ENSOANG00000020155	-	97	83.202	Ornithorhynchus_anatinus
ENSSBOG00000034726	PARN	99	91.071	ENSOCUG00000000322	PARN	100	89.623	Oryctolagus_cuniculus
ENSSBOG00000034726	PARN	88	79.661	ENSORLG00020010313	parn	86	71.017	Oryzias_latipes_hni
ENSSBOG00000034726	PARN	88	79.661	ENSORLG00015000300	parn	86	70.847	Oryzias_latipes_hsok
ENSSBOG00000034726	PARN	88	79.661	ENSOMEG00000019555	parn	96	63.761	Oryzias_melastigma
ENSSBOG00000034726	PARN	77	92.121	ENSOGAG00000014626	PARN	100	92.121	Otolemur_garnettii
ENSSBOG00000034726	PARN	77	95.547	ENSOARG00000007574	PARN	100	95.547	Ovis_aries
ENSSBOG00000034726	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSSBOG00000034726	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSSBOG00000034726	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSSBOG00000034726	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSSBOG00000034726	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSSBOG00000034726	PARN	96	79.661	ENSPKIG00000022807	parn	91	69.363	Paramormyrops_kingsleyae
ENSSBOG00000034726	PARN	98	89.831	ENSPSIG00000014804	PARN	100	80.796	Pelodiscus_sinensis
ENSSBOG00000034726	PARN	80	75.292	ENSPMGG00000014431	parn	75	73.383	Periophthalmus_magnuspinnatus
ENSSBOG00000034726	PARN	100	94.915	ENSPEMG00000018439	Parn	100	81.690	Peromyscus_maniculatus_bairdii
ENSSBOG00000034726	PARN	74	74.126	ENSPMAG00000003956	parn	99	66.154	Petromyzon_marinus
ENSSBOG00000034726	PARN	65	87.981	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSSBOG00000034726	PARN	83	75.746	ENSPFOG00000012823	parn	84	70.875	Poecilia_formosa
ENSSBOG00000034726	PARN	83	75.933	ENSPLAG00000006395	parn	84	71.044	Poecilia_latipinna
ENSSBOG00000034726	PARN	83	75.933	ENSPMEG00000007711	parn	84	71.212	Poecilia_mexicana
ENSSBOG00000034726	PARN	83	75.560	ENSPREG00000000147	parn	84	70.875	Poecilia_reticulata
ENSSBOG00000034726	PARN	100	98.305	ENSPPYG00000007123	PARN	100	95.632	Pongo_abelii
ENSSBOG00000034726	PARN	93	96.154	ENSPCAG00000001741	PARN	100	81.518	Procavia_capensis
ENSSBOG00000034726	PARN	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSSBOG00000034726	PARN	98	98.077	ENSPVAG00000002547	PARN	100	87.816	Pteropus_vampyrus
ENSSBOG00000034726	PARN	89	77.966	ENSPNYG00000006835	parn	90	74.627	Pundamilia_nyererei
ENSSBOG00000034726	PARN	84	71.881	ENSPNAG00000018905	parn	86	71.881	Pygocentrus_nattereri
ENSSBOG00000034726	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSSBOG00000034726	PARN	72	98.198	ENSRBIG00000018726	PARN	100	98.198	Rhinopithecus_bieti
ENSSBOG00000034726	PARN	72	98.198	ENSRROG00000011162	-	100	98.198	Rhinopithecus_roxellana
ENSSBOG00000034726	PARN	65	90.431	ENSSHAG00000008493	PARN	94	90.431	Sarcophilus_harrisii
ENSSBOG00000034726	PARN	94	79.661	ENSSFOG00015014165	parn	96	71.843	Scleropages_formosus
ENSSBOG00000034726	PARN	94	69.697	ENSSMAG00000000685	parn	100	61.774	Scophthalmus_maximus
ENSSBOG00000034726	PARN	94	76.271	ENSSDUG00000014555	parn	83	72.014	Seriola_dumerili
ENSSBOG00000034726	PARN	91	78.621	ENSSARG00000014339	PARN	100	78.621	Sorex_araneus
ENSSBOG00000034726	PARN	100	89.831	ENSSPUG00000007719	PARN	100	83.255	Sphenodon_punctatus
ENSSBOG00000034726	PARN	88	77.966	ENSSPAG00000007095	parn	86	75.432	Stegastes_partitus
ENSSBOG00000034726	PARN	100	98.305	ENSSSCG00000007878	PARN	89	91.080	Sus_scrofa
ENSSBOG00000034726	PARN	99	87.037	ENSTGUG00000004971	PARN	99	81.073	Taeniopygia_guttata
ENSSBOG00000034726	PARN	54	30.919	ENSTGUG00000011418	PNLDC1	68	30.919	Taeniopygia_guttata
ENSSBOG00000034726	PARN	100	79.661	ENSTNIG00000008252	parn	100	68.006	Tetraodon_nigroviridis
ENSSBOG00000034726	PARN	88	82.555	ENSTBEG00000010407	PARN	100	77.586	Tupaia_belangeri
ENSSBOG00000034726	PARN	98	98.077	ENSTTRG00000002843	PARN	100	86.392	Tursiops_truncatus
ENSSBOG00000034726	PARN	67	84.527	ENSUAMG00000008283	PARN	94	81.119	Ursus_americanus
ENSSBOG00000034726	PARN	100	98.305	ENSUMAG00000004527	PARN	100	91.236	Ursus_maritimus
ENSSBOG00000034726	PARN	95	98.077	ENSVPAG00000008968	PARN	100	87.785	Vicugna_pacos
ENSSBOG00000034726	PARN	100	96.610	ENSVVUG00000019509	PARN	100	91.393	Vulpes_vulpes
ENSSBOG00000034726	PARN	100	81.967	ENSXETG00000010994	parn	100	81.179	Xenopus_tropicalis
ENSSBOG00000034726	PARN	86	79.661	ENSXCOG00000015990	parn	96	67.513	Xiphophorus_couchianus
ENSSBOG00000034726	PARN	94	79.661	ENSXMAG00000014783	parn	84	71.549	Xiphophorus_maculatus