EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000034827 (Gene tree)
Gene ID: 101035707
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 167881 bases
Position: chrJH378181.1:7802553-7970433
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000038011	ResIII	PF04851.15	2.9e-08	1	1
ENSSBOP00000038006	ResIII	PF04851.15	2.9e-08	1	1
ENSSBOP00000037995	ResIII	PF04851.15	3e-08	1	1
ENSSBOP00000037990	ResIII	PF04851.15	3e-08	1	1
ENSSBOP00000038011	BRK	PF07533.16	3.4e-17	1	1
ENSSBOP00000038006	BRK	PF07533.16	3.4e-17	1	1
ENSSBOP00000037995	BRK	PF07533.16	3.4e-17	1	1
ENSSBOP00000037990	BRK	PF07533.16	3.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000054993	SMARCA2-209	1961	XM_010346164	ENSSBOP00000038047	260 (aa)	XP_010344466	A0A2K6V1K4
ENSSBOT00000054989	SMARCA2-208	837	-	ENSSBOP00000038043	278 (aa)	-	A0A2K6V1J5
ENSSBOT00000054940	SMARCA2-202	4665	XM_010346161	ENSSBOP00000037995	1554 (aa)	XP_010344463	A0A2K6V1K1
ENSSBOT00000054967	SMARCA2-206	747	-	ENSSBOP00000038022	248 (aa)	-	A0A2K6V1H5
ENSSBOT00000054964	SMARCA2-205	879	XM_010346191	ENSSBOP00000038019	293 (aa)	XP_010344493	A0A2K6V1J9
ENSSBOT00000054935	SMARCA2-201	4719	-	ENSSBOP00000037990	1572 (aa)	-	A0A2K6V1J6
ENSSBOT00000054951	SMARCA2-203	4635	-	ENSSBOP00000038006	1544 (aa)	-	A0A2K6V1G3
ENSSBOT00000054984	SMARCA2-207	1848	XM_010346162	ENSSBOP00000038038	276 (aa)	XP_010344464	A0A2K6V1J3
ENSSBOT00000054956	SMARCA2-204	4569	-	ENSSBOP00000038011	1522 (aa)	-	A0A2K6V1G8
ENSSBOT00000055004	SMARCA2-210	738	-	ENSSBOP00000038058	245 (aa)	-	A0A2K6V1K8

Gene Model

Click here to download ENSSBOG00000034827's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq04714	Thermogenesis	KEGG
sbq05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000034827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000034827	SMARCA2	95	80.742	ENSSBOG00000026896	SMARCA4	89	83.084

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000034827	SMARCA2	100	95.196	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSSBOG00000034827	SMARCA2	100	78.957	ENSAPOG00000002641	SMARCA2	91	85.579	Acanthochromis_polyacanthus
ENSSBOG00000034827	SMARCA2	83	98.279	ENSAMEG00000012325	SMARCA2	100	99.296	Ailuropoda_melanoleuca
ENSSBOG00000034827	SMARCA2	100	78.951	ENSACIG00000015607	SMARCA2	93	84.573	Amphilophus_citrinellus
ENSSBOG00000034827	SMARCA2	96	85.526	ENSAOCG00000009647	-	91	85.500	Amphiprion_ocellaris
ENSSBOG00000034827	SMARCA2	96	85.681	ENSAPEG00000007646	SMARCA2	91	85.500	Amphiprion_percula
ENSSBOG00000034827	SMARCA2	94	87.370	ENSATEG00000006916	SMARCA2	90	86.794	Anabas_testudineus
ENSSBOG00000034827	SMARCA2	98	83.871	ENSAPLG00000013873	SMARCA2	100	83.871	Anas_platyrhynchos
ENSSBOG00000034827	SMARCA2	100	89.878	ENSACAG00000002423	SMARCA2	95	94.558	Anolis_carolinensis
ENSSBOG00000034827	SMARCA2	100	95.688	ENSANAG00000026498	SMARCA2	100	95.688	Aotus_nancymaae
ENSSBOG00000034827	SMARCA2	100	80.318	ENSACLG00000004248	SMARCA2	97	79.277	Astatotilapia_calliptera
ENSSBOG00000034827	SMARCA2	100	81.258	ENSAMXG00000012404	smarca2	93	88.587	Astyanax_mexicanus
ENSSBOG00000034827	SMARCA2	100	94.315	ENSBTAG00000007494	SMARCA2	100	94.315	Bos_taurus
ENSSBOG00000034827	SMARCA2	100	94.987	ENSCJAG00000010710	SMARCA2	100	94.987	Callithrix_jacchus
ENSSBOG00000034827	SMARCA2	100	95.362	ENSCAFG00000002013	SMARCA2	100	95.362	Canis_familiaris
ENSSBOG00000034827	SMARCA2	80	94.449	ENSCAFG00020026802	SMARCA2	98	95.857	Canis_lupus_dingo
ENSSBOG00000034827	SMARCA2	100	95.105	ENSCHIG00000025863	SMARCA2	100	94.787	Capra_hircus
ENSSBOG00000034827	SMARCA2	100	93.723	ENSTSYG00000003858	SMARCA2	100	93.828	Carlito_syrichta
ENSSBOG00000034827	SMARCA2	99	89.590	ENSCAPG00000002890	SMARCA2	99	89.835	Cavia_aperea
ENSSBOG00000034827	SMARCA2	100	94.114	ENSCPOG00000005475	SMARCA2	100	94.114	Cavia_porcellus
ENSSBOG00000034827	SMARCA2	100	95.509	ENSCCAG00000030636	SMARCA2	100	95.509	Cebus_capucinus
ENSSBOG00000034827	SMARCA2	100	95.907	ENSCATG00000031470	SMARCA2	100	95.907	Cercocebus_atys
ENSSBOG00000034827	SMARCA2	99	93.371	ENSCLAG00000014484	SMARCA2	100	92.970	Chinchilla_lanigera
ENSSBOG00000034827	SMARCA2	93	94.595	ENSCSAG00000008650	SMARCA2	99	94.595	Chlorocebus_sabaeus
ENSSBOG00000034827	SMARCA2	87	90.660	ENSCHOG00000004316	SMARCA2	87	90.660	Choloepus_hoffmanni
ENSSBOG00000034827	SMARCA2	100	90.754	ENSCPBG00000025463	SMARCA2	100	96.276	Chrysemys_picta_bellii
ENSSBOG00000034827	SMARCA2	100	95.196	ENSCANG00000039597	SMARCA2	100	95.196	Colobus_angolensis_palliatus
ENSSBOG00000034827	SMARCA2	100	89.480	ENSCGRG00001002323	Smarca2	100	89.480	Cricetulus_griseus_chok1gshd
ENSSBOG00000034827	SMARCA2	99	76.600	ENSCSEG00000019311	SMARCA2	96	76.350	Cynoglossus_semilaevis
ENSSBOG00000034827	SMARCA2	80	86.479	ENSCVAG00000016571	SMARCA2	88	86.346	Cyprinodon_variegatus
ENSSBOG00000034827	SMARCA2	100	80.973	ENSDARG00000008904	smarca2	91	88.003	Danio_rerio
ENSSBOG00000034827	SMARCA2	100	93.567	ENSDNOG00000006402	SMARCA2	100	93.567	Dasypus_novemcinctus
ENSSBOG00000034827	SMARCA2	100	93.707	ENSDORG00000014832	Smarca2	100	93.455	Dipodomys_ordii
ENSSBOG00000034827	SMARCA2	84	59.011	FBgn0000212	brm	90	53.151	Drosophila_melanogaster
ENSSBOG00000034827	SMARCA2	94	71.458	ENSEBUG00000011442	-	89	78.213	Eptatretus_burgeri
ENSSBOG00000034827	SMARCA2	86	61.953	ENSEBUG00000002449	-	95	63.084	Eptatretus_burgeri
ENSSBOG00000034827	SMARCA2	100	94.511	ENSEASG00005010312	SMARCA2	100	94.511	Equus_asinus_asinus
ENSSBOG00000034827	SMARCA2	67	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSSBOG00000034827	SMARCA2	87	87.573	ENSELUG00000010318	smarca2	88	87.364	Esox_lucius
ENSSBOG00000034827	SMARCA2	100	94.854	ENSFCAG00000001568	SMARCA2	100	94.854	Felis_catus
ENSSBOG00000034827	SMARCA2	100	91.794	ENSFALG00000010416	SMARCA2	100	91.986	Ficedula_albicollis
ENSSBOG00000034827	SMARCA2	99	94.335	ENSFDAG00000010502	SMARCA2	99	93.270	Fukomys_damarensis
ENSSBOG00000034827	SMARCA2	99	80.077	ENSFHEG00000021250	SMARCA2	91	86.131	Fundulus_heteroclitus
ENSSBOG00000034827	SMARCA2	98	77.012	ENSGMOG00000014229	SMARCA2	92	84.248	Gadus_morhua
ENSSBOG00000034827	SMARCA2	100	90.698	ENSGALG00000010164	SMARCA2	100	90.698	Gallus_gallus
ENSSBOG00000034827	SMARCA2	95	75.502	ENSGAFG00000001164	SMARCA2	93	74.340	Gambusia_affinis
ENSSBOG00000034827	SMARCA2	99	78.109	ENSGACG00000014488	SMARCA2	91	84.726	Gasterosteus_aculeatus
ENSSBOG00000034827	SMARCA2	100	91.418	ENSGAGG00000024412	SMARCA2	100	91.418	Gopherus_agassizii
ENSSBOG00000034827	SMARCA2	100	93.647	ENSGGOG00000000513	SMARCA2	99	96.714	Gorilla_gorilla
ENSSBOG00000034827	SMARCA2	99	80.387	ENSHBUG00000006691	SMARCA2	91	86.199	Haplochromis_burtoni
ENSSBOG00000034827	SMARCA2	99	93.338	ENSHGLG00000005215	SMARCA2	99	92.793	Heterocephalus_glaber_female
ENSSBOG00000034827	SMARCA2	100	94.942	ENSHGLG00100010496	SMARCA2	100	94.942	Heterocephalus_glaber_male
ENSSBOG00000034827	SMARCA2	79	86.449	ENSHCOG00000015348	-	88	86.647	Hippocampus_comes
ENSSBOG00000034827	SMARCA2	100	78.801	ENSIPUG00000011060	smarca2	99	79.109	Ictalurus_punctatus
ENSSBOG00000034827	SMARCA2	100	93.719	ENSSTOG00000006812	SMARCA2	100	93.308	Ictidomys_tridecemlineatus
ENSSBOG00000034827	SMARCA2	100	94.062	ENSJJAG00000010867	Smarca2	100	94.062	Jaculus_jaculus
ENSSBOG00000034827	SMARCA2	96	85.328	ENSKMAG00000015844	-	91	85.354	Kryptolebias_marmoratus
ENSSBOG00000034827	SMARCA2	95	89.478	ENSLOCG00000011499	smarca2	94	89.036	Lepisosteus_oculatus
ENSSBOG00000034827	SMARCA2	100	92.188	ENSLAFG00000014061	SMARCA2	100	92.188	Loxodonta_africana
ENSSBOG00000034827	SMARCA2	100	96.979	ENSMFAG00000003814	SMARCA2	100	96.979	Macaca_fascicularis
ENSSBOG00000034827	SMARCA2	100	95.196	ENSMMUG00000015279	SMARCA2	100	95.196	Macaca_mulatta
ENSSBOG00000034827	SMARCA2	100	95.440	ENSMNEG00000041069	SMARCA2	100	95.440	Macaca_nemestrina
ENSSBOG00000034827	SMARCA2	100	95.743	ENSMLEG00000027418	SMARCA2	100	95.743	Mandrillus_leucophaeus
ENSSBOG00000034827	SMARCA2	96	86.610	ENSMAMG00000003056	SMARCA2	91	86.941	Mastacembelus_armatus
ENSSBOG00000034827	SMARCA2	99	80.543	ENSMZEG00005020709	SMARCA2	91	86.120	Maylandia_zebra
ENSSBOG00000034827	SMARCA2	76	77.955	ENSMGAG00000005160	-	92	90.610	Meleagris_gallopavo
ENSSBOG00000034827	SMARCA2	100	95.350	ENSMICG00000005162	SMARCA2	100	95.350	Microcebus_murinus
ENSSBOG00000034827	SMARCA2	100	92.893	ENSMOCG00000001611	Smarca2	100	92.672	Microtus_ochrogaster
ENSSBOG00000034827	SMARCA2	99	77.399	ENSMMOG00000014196	SMARCA2	91	83.453	Mola_mola
ENSSBOG00000034827	SMARCA2	100	93.248	ENSMODG00000003578	SMARCA2	100	92.371	Monodelphis_domestica
ENSSBOG00000034827	SMARCA2	99	79.818	ENSMALG00000009611	SMARCA2	97	78.436	Monopterus_albus
ENSSBOG00000034827	SMARCA2	98	92.958	MGP_CAROLIEiJ_G0022841	Smarca2	100	92.759	Mus_caroli
ENSSBOG00000034827	SMARCA2	100	93.493	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSSBOG00000034827	SMARCA2	100	92.731	MGP_PahariEiJ_G0014334	Smarca2	100	92.668	Mus_pahari
ENSSBOG00000034827	SMARCA2	97	92.958	MGP_SPRETEiJ_G0023759	Smarca2	99	100.000	Mus_spretus
ENSSBOG00000034827	SMARCA2	84	98.126	ENSMPUG00000005171	SMARCA2	94	99.141	Mustela_putorius_furo
ENSSBOG00000034827	SMARCA2	99	88.048	ENSMLUG00000002342	SMARCA2	93	94.409	Myotis_lucifugus
ENSSBOG00000034827	SMARCA2	99	93.616	ENSNGAG00000000108	Smarca2	99	93.414	Nannospalax_galili
ENSSBOG00000034827	SMARCA2	95	67.306	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSSBOG00000034827	SMARCA2	100	95.566	ENSNLEG00000008575	SMARCA2	100	95.566	Nomascus_leucogenys
ENSSBOG00000034827	SMARCA2	100	85.586	ENSMEUG00000009812	SMARCA2	100	85.650	Notamacropus_eugenii
ENSSBOG00000034827	SMARCA2	84	91.595	ENSOPRG00000013474	SMARCA2	94	92.093	Ochotona_princeps
ENSSBOG00000034827	SMARCA2	99	92.826	ENSODEG00000005452	SMARCA2	99	92.637	Octodon_degus
ENSSBOG00000034827	SMARCA2	96	86.290	ENSONIG00000014163	SMARCA2	90	87.281	Oreochromis_niloticus
ENSSBOG00000034827	SMARCA2	50	94.480	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSSBOG00000034827	SMARCA2	84	97.121	ENSOCUG00000006320	SMARCA2	100	88.702	Oryctolagus_cuniculus
ENSSBOG00000034827	SMARCA2	100	78.616	ENSORLG00000020820	SMARCA2	95	84.876	Oryzias_latipes
ENSSBOG00000034827	SMARCA2	100	78.792	ENSORLG00015006289	SMARCA2	93	85.839	Oryzias_latipes_hsok
ENSSBOG00000034827	SMARCA2	99	80.349	ENSOMEG00000009736	-	93	88.124	Oryzias_melastigma
ENSSBOG00000034827	SMARCA2	99	92.293	ENSOGAG00000017053	SMARCA2	99	92.231	Otolemur_garnettii
ENSSBOG00000034827	SMARCA2	100	93.884	ENSOARG00000013265	SMARCA2	100	93.884	Ovis_aries
ENSSBOG00000034827	SMARCA2	100	96.149	ENSPPAG00000038717	SMARCA2	100	96.149	Pan_paniscus
ENSSBOG00000034827	SMARCA2	100	94.917	ENSPPRG00000001879	SMARCA2	100	94.917	Panthera_pardus
ENSSBOG00000034827	SMARCA2	100	95.105	ENSPTRG00000051168	SMARCA2	100	95.105	Pan_troglodytes
ENSSBOG00000034827	SMARCA2	100	89.347	ENSPANG00000025121	SMARCA2	100	89.474	Papio_anubis
ENSSBOG00000034827	SMARCA2	100	82.859	ENSPKIG00000018469	-	94	88.310	Paramormyrops_kingsleyae
ENSSBOG00000034827	SMARCA2	100	91.227	ENSPSIG00000006284	SMARCA2	100	91.227	Pelodiscus_sinensis
ENSSBOG00000034827	SMARCA2	98	74.062	ENSPMGG00000013696	-	97	73.770	Periophthalmus_magnuspinnatus
ENSSBOG00000034827	SMARCA2	100	92.500	ENSPEMG00000019821	Smarca2	100	92.312	Peromyscus_maniculatus_bairdii
ENSSBOG00000034827	SMARCA2	90	78.686	ENSPMAG00000005337	-	89	78.268	Petromyzon_marinus
ENSSBOG00000034827	SMARCA2	100	92.986	ENSPCIG00000015658	SMARCA2	100	93.115	Phascolarctos_cinereus
ENSSBOG00000034827	SMARCA2	96	85.228	ENSPFOG00000001856	SMARCA2	92	84.609	Poecilia_formosa
ENSSBOG00000034827	SMARCA2	99	78.913	ENSPLAG00000017829	SMARCA2	92	83.122	Poecilia_latipinna
ENSSBOG00000034827	SMARCA2	95	85.984	ENSPMEG00000001815	-	91	84.676	Poecilia_mexicana
ENSSBOG00000034827	SMARCA2	100	78.137	ENSPREG00000013800	SMARCA2	91	84.910	Poecilia_reticulata
ENSSBOG00000034827	SMARCA2	100	95.066	ENSPPYG00000019258	SMARCA2	100	95.066	Pongo_abelii
ENSSBOG00000034827	SMARCA2	79	80.641	ENSPCAG00000016969	SMARCA2	78	80.438	Procavia_capensis
ENSSBOG00000034827	SMARCA2	100	92.035	ENSPCOG00000025709	SMARCA2	100	92.688	Propithecus_coquereli
ENSSBOG00000034827	SMARCA2	91	98.421	ENSPVAG00000000901	SMARCA2	95	98.421	Pteropus_vampyrus
ENSSBOG00000034827	SMARCA2	100	76.797	ENSPNYG00000004533	SMARCA2	92	82.334	Pundamilia_nyererei
ENSSBOG00000034827	SMARCA2	93	89.789	ENSPNAG00000014635	smarca2	92	89.385	Pygocentrus_nattereri
ENSSBOG00000034827	SMARCA2	100	93.250	ENSRNOG00000011931	Smarca2	80	98.833	Rattus_norvegicus
ENSSBOG00000034827	SMARCA2	100	96.216	ENSRBIG00000038618	SMARCA2	100	96.216	Rhinopithecus_bieti
ENSSBOG00000034827	SMARCA2	100	94.664	ENSRROG00000019271	SMARCA2	100	94.664	Rhinopithecus_roxellana
ENSSBOG00000034827	SMARCA2	100	92.739	ENSSHAG00000007884	SMARCA2	100	90.136	Sarcophilus_harrisii
ENSSBOG00000034827	SMARCA2	91	83.298	ENSSFOG00015014870	SMARCA2	97	85.348	Scleropages_formosus
ENSSBOG00000034827	SMARCA2	100	79.380	ENSSMAG00000013707	SMARCA2	93	85.243	Scophthalmus_maximus
ENSSBOG00000034827	SMARCA2	100	83.069	ENSSDUG00000008852	-	89	86.356	Seriola_dumerili
ENSSBOG00000034827	SMARCA2	99	78.508	ENSSLDG00000025449	SMARCA2	96	77.340	Seriola_lalandi_dorsalis
ENSSBOG00000034827	SMARCA2	95	97.126	ENSSARG00000007888	SMARCA2	95	96.842	Sorex_araneus
ENSSBOG00000034827	SMARCA2	95	86.890	ENSSPUG00000001629	SMARCA2	92	92.120	Sphenodon_punctatus
ENSSBOG00000034827	SMARCA2	100	78.799	ENSSPAG00000020091	-	91	85.816	Stegastes_partitus
ENSSBOG00000034827	SMARCA2	100	95.168	ENSSSCG00000005232	SMARCA2	100	95.168	Sus_scrofa
ENSSBOG00000034827	SMARCA2	100	91.603	ENSTGUG00000005460	SMARCA2	100	91.603	Taeniopygia_guttata
ENSSBOG00000034827	SMARCA2	99	77.686	ENSTRUG00000015619	SMARCA2	91	85.726	Takifugu_rubripes
ENSSBOG00000034827	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	70	100.000	Tupaia_belangeri
ENSSBOG00000034827	SMARCA2	100	91.481	ENSTTRG00000002033	SMARCA2	100	90.858	Tursiops_truncatus
ENSSBOG00000034827	SMARCA2	89	94.460	ENSUAMG00000024701	SMARCA2	99	94.721	Ursus_americanus
ENSSBOG00000034827	SMARCA2	91	87.249	ENSVPAG00000001204	SMARCA2	100	87.249	Vicugna_pacos
ENSSBOG00000034827	SMARCA2	77	95.913	ENSVVUG00000004598	SMARCA2	99	95.913	Vulpes_vulpes
ENSSBOG00000034827	SMARCA2	96	88.589	ENSXETG00000015299	smarca2	93	89.028	Xenopus_tropicalis
ENSSBOG00000034827	SMARCA2	89	78.132	ENSXCOG00000011073	SMARCA2	97	78.100	Xiphophorus_couchianus
ENSSBOG00000034827	SMARCA2	99	82.753	ENSXMAG00000015611	SMARCA2	93	84.832	Xiphophorus_maculatus