EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000034938 (Gene tree)
Gene ID: 101051375
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 30841 bases
Position: chrJH378125.1:15427832-15458672
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000037682	MMR_HSR1	PF01926.23	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000054626	LSG1-201	2330	XM_010337748	ENSSBOP00000037682	658 (aa)	XP_010336050	A0A2K6V0J4

Gene Model

Click here to download ENSSBOG00000034938's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000034938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000034938	LSG1	55	37.441	ENSSBOG00000031909	GNL1	65	30.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000034938	LSG1	100	93.769	ENSG00000041802	LSG1	98	95.977	Homo_sapiens
ENSSBOG00000034938	LSG1	99	64.697	ENSAPOG00000009694	lsg1	99	65.152	Acanthochromis_polyacanthus
ENSSBOG00000034938	LSG1	99	83.005	ENSAMEG00000009343	LSG1	99	83.005	Ailuropoda_melanoleuca
ENSSBOG00000034938	LSG1	98	65.217	ENSACIG00000012406	lsg1	99	64.947	Amphilophus_citrinellus
ENSSBOG00000034938	LSG1	99	64.394	ENSAOCG00000016066	lsg1	99	64.697	Amphiprion_ocellaris
ENSSBOG00000034938	LSG1	99	64.848	ENSAPEG00000003252	lsg1	99	64.848	Amphiprion_percula
ENSSBOG00000034938	LSG1	98	65.485	ENSATEG00000011794	lsg1	99	64.955	Anabas_testudineus
ENSSBOG00000034938	LSG1	95	65.714	ENSACAG00000004222	LSG1	99	65.183	Anolis_carolinensis
ENSSBOG00000034938	LSG1	100	98.024	ENSANAG00000021153	LSG1	100	98.024	Aotus_nancymaae
ENSSBOG00000034938	LSG1	99	64.502	ENSACLG00000000520	lsg1	99	65.106	Astatotilapia_calliptera
ENSSBOG00000034938	LSG1	99	62.985	ENSAMXG00000008271	lsg1	99	63.293	Astyanax_mexicanus
ENSSBOG00000034938	LSG1	100	85.432	ENSBTAG00000008461	LSG1	100	85.888	Bos_taurus
ENSSBOG00000034938	LSG1	74	51.531	WBGene00016907	C53H9.2	95	58.537	Caenorhabditis_elegans
ENSSBOG00000034938	LSG1	100	96.960	ENSCJAG00000013962	LSG1	100	96.960	Callithrix_jacchus
ENSSBOG00000034938	LSG1	95	85.440	ENSCAFG00000013445	LSG1	99	85.440	Canis_familiaris
ENSSBOG00000034938	LSG1	99	83.812	ENSCAFG00020002216	LSG1	99	85.072	Canis_lupus_dingo
ENSSBOG00000034938	LSG1	99	85.106	ENSCHIG00000015769	LSG1	99	85.106	Capra_hircus
ENSSBOG00000034938	LSG1	100	90.137	ENSTSYG00000001447	LSG1	100	90.137	Carlito_syrichta
ENSSBOG00000034938	LSG1	95	77.707	ENSCAPG00000009856	LSG1	100	76.960	Cavia_aperea
ENSSBOG00000034938	LSG1	100	96.657	ENSCCAG00000035744	LSG1	100	96.657	Cebus_capucinus
ENSSBOG00000034938	LSG1	100	93.617	ENSCATG00000042060	LSG1	100	91.945	Cercocebus_atys
ENSSBOG00000034938	LSG1	100	94.225	ENSCSAG00000008796	LSG1	92	94.225	Chlorocebus_sabaeus
ENSSBOG00000034938	LSG1	99	68.405	ENSCPBG00000015941	LSG1	83	69.428	Chrysemys_picta_bellii
ENSSBOG00000034938	LSG1	66	63.684	ENSCING00000007079	-	91	63.684	Ciona_intestinalis
ENSSBOG00000034938	LSG1	67	63.265	ENSCSAVG00000002514	-	88	63.265	Ciona_savignyi
ENSSBOG00000034938	LSG1	100	94.073	ENSCANG00000030709	LSG1	100	94.073	Colobus_angolensis_palliatus
ENSSBOG00000034938	LSG1	100	83.333	ENSCGRG00001019846	Lsg1	100	83.333	Cricetulus_griseus_chok1gshd
ENSSBOG00000034938	LSG1	100	83.333	ENSCGRG00000014617	Lsg1	100	83.333	Cricetulus_griseus_crigri
ENSSBOG00000034938	LSG1	98	65.344	ENSCSEG00000008522	lsg1	99	64.371	Cynoglossus_semilaevis
ENSSBOG00000034938	LSG1	97	66.044	ENSCVAG00000002484	lsg1	99	65.653	Cyprinodon_variegatus
ENSSBOG00000034938	LSG1	99	67.477	ENSDARG00000015352	lsg1	99	67.629	Danio_rerio
ENSSBOG00000034938	LSG1	100	84.290	ENSDNOG00000006224	LSG1	100	83.988	Dasypus_novemcinctus
ENSSBOG00000034938	LSG1	82	57.377	FBgn0266284	Ns3	91	55.642	Drosophila_melanogaster
ENSSBOG00000034938	LSG1	88	86.667	ENSETEG00000003888	LSG1	89	86.667	Echinops_telfairi
ENSSBOG00000034938	LSG1	88	57.119	ENSEBUG00000003119	lsg1	85	55.501	Eptatretus_burgeri
ENSSBOG00000034938	LSG1	100	86.646	ENSEASG00005000678	LSG1	100	86.646	Equus_asinus_asinus
ENSSBOG00000034938	LSG1	100	86.950	ENSECAG00000017659	LSG1	100	86.950	Equus_caballus
ENSSBOG00000034938	LSG1	87	82.759	ENSEEUG00000015217	LSG1	87	82.759	Erinaceus_europaeus
ENSSBOG00000034938	LSG1	99	61.573	ENSELUG00000023973	lsg1	99	61.573	Esox_lucius
ENSSBOG00000034938	LSG1	99	86.778	ENSFCAG00000024957	LSG1	99	86.778	Felis_catus
ENSSBOG00000034938	LSG1	92	66.395	ENSFALG00000007210	LSG1	94	66.395	Ficedula_albicollis
ENSSBOG00000034938	LSG1	100	78.267	ENSFDAG00000017373	LSG1	100	78.604	Fukomys_damarensis
ENSSBOG00000034938	LSG1	97	63.328	ENSFHEG00000003680	lsg1	99	63.785	Fundulus_heteroclitus
ENSSBOG00000034938	LSG1	82	71.667	ENSGMOG00000015834	lsg1	88	70.079	Gadus_morhua
ENSSBOG00000034938	LSG1	99	64.662	ENSGALG00000007058	LSG1	87	63.910	Gallus_gallus
ENSSBOG00000034938	LSG1	97	65.523	ENSGAFG00000015831	lsg1	99	64.307	Gambusia_affinis
ENSSBOG00000034938	LSG1	98	62.883	ENSGACG00000009323	lsg1	99	61.976	Gasterosteus_aculeatus
ENSSBOG00000034938	LSG1	100	93.921	ENSGGOG00000000520	LSG1	100	93.921	Gorilla_gorilla
ENSSBOG00000034938	LSG1	99	64.438	ENSHBUG00000005659	lsg1	99	65.046	Haplochromis_burtoni
ENSSBOG00000034938	LSG1	100	76.772	ENSHGLG00000017390	LSG1	100	76.471	Heterocephalus_glaber_female
ENSSBOG00000034938	LSG1	100	76.772	ENSHGLG00100018587	LSG1	100	76.471	Heterocephalus_glaber_male
ENSSBOG00000034938	LSG1	97	64.506	ENSHCOG00000016848	lsg1	99	63.056	Hippocampus_comes
ENSSBOG00000034938	LSG1	99	65.361	ENSIPUG00000008631	lsg1	99	65.361	Ictalurus_punctatus
ENSSBOG00000034938	LSG1	89	83.505	ENSSTOG00000010234	LSG1	100	83.505	Ictidomys_tridecemlineatus
ENSSBOG00000034938	LSG1	100	80.967	ENSJJAG00000015513	Lsg1	100	80.967	Jaculus_jaculus
ENSSBOG00000034938	LSG1	98	63.256	ENSKMAG00000009681	lsg1	99	62.766	Kryptolebias_marmoratus
ENSSBOG00000034938	LSG1	98	63.566	ENSLBEG00000024261	lsg1	99	63.526	Labrus_bergylta
ENSSBOG00000034938	LSG1	99	66.667	ENSLACG00000013399	LSG1	99	66.667	Latimeria_chalumnae
ENSSBOG00000034938	LSG1	98	66.099	ENSLOCG00000004918	lsg1	99	65.909	Lepisosteus_oculatus
ENSSBOG00000034938	LSG1	100	84.522	ENSLAFG00000012919	-	100	84.522	Loxodonta_africana
ENSSBOG00000034938	LSG1	100	94.073	ENSMFAG00000039903	LSG1	100	92.401	Macaca_fascicularis
ENSSBOG00000034938	LSG1	100	94.225	ENSMMUG00000010708	LSG1	100	94.225	Macaca_mulatta
ENSSBOG00000034938	LSG1	100	93.921	ENSMNEG00000031538	LSG1	100	92.249	Macaca_nemestrina
ENSSBOG00000034938	LSG1	100	94.225	ENSMLEG00000041184	LSG1	100	94.225	Mandrillus_leucophaeus
ENSSBOG00000034938	LSG1	99	63.636	ENSMAMG00000000470	lsg1	99	62.896	Mastacembelus_armatus
ENSSBOG00000034938	LSG1	99	64.307	ENSMZEG00005017865	lsg1	99	64.894	Maylandia_zebra
ENSSBOG00000034938	LSG1	89	65.821	ENSMGAG00000007050	LSG1	99	65.482	Meleagris_gallopavo
ENSSBOG00000034938	LSG1	91	81.260	ENSMAUG00000016976	Lsg1	93	82.090	Mesocricetus_auratus
ENSSBOG00000034938	LSG1	100	87.405	ENSMICG00000049087	LSG1	100	87.405	Microcebus_murinus
ENSSBOG00000034938	LSG1	100	81.269	ENSMOCG00000022136	Lsg1	100	80.967	Microtus_ochrogaster
ENSSBOG00000034938	LSG1	83	73.510	ENSMMOG00000008884	lsg1	99	73.510	Mola_mola
ENSSBOG00000034938	LSG1	99	59.455	ENSMODG00000019828	LSG1	99	58.631	Monodelphis_domestica
ENSSBOG00000034938	LSG1	100	82.523	MGP_CAROLIEiJ_G0020648	Lsg1	100	82.523	Mus_caroli
ENSSBOG00000034938	LSG1	100	83.283	ENSMUSG00000022538	Lsg1	100	83.283	Mus_musculus
ENSSBOG00000034938	LSG1	98	83.333	MGP_PahariEiJ_G0016352	Lsg1	100	83.156	Mus_pahari
ENSSBOG00000034938	LSG1	100	83.131	MGP_SPRETEiJ_G0021544	Lsg1	100	83.131	Mus_spretus
ENSSBOG00000034938	LSG1	99	84.195	ENSMPUG00000003734	LSG1	99	84.195	Mustela_putorius_furo
ENSSBOG00000034938	LSG1	99	85.888	ENSMLUG00000012548	LSG1	99	85.888	Myotis_lucifugus
ENSSBOG00000034938	LSG1	100	82.094	ENSNGAG00000021872	Lsg1	100	80.425	Nannospalax_galili
ENSSBOG00000034938	LSG1	100	93.921	ENSNLEG00000008293	LSG1	100	93.921	Nomascus_leucogenys
ENSSBOG00000034938	LSG1	69	69.101	ENSMEUG00000009041	-	82	69.072	Notamacropus_eugenii
ENSSBOG00000034938	LSG1	99	64.103	ENSONIG00000002635	lsg1	99	65.053	Oreochromis_niloticus
ENSSBOG00000034938	LSG1	95	72.568	ENSOANG00000012742	LSG1	99	71.611	Ornithorhynchus_anatinus
ENSSBOG00000034938	LSG1	100	86.495	ENSOCUG00000004817	LSG1	100	86.495	Oryctolagus_cuniculus
ENSSBOG00000034938	LSG1	98	64.130	ENSORLG00000007695	lsg1	99	63.775	Oryzias_latipes
ENSSBOG00000034938	LSG1	98	63.876	ENSORLG00020016286	lsg1	99	63.595	Oryzias_latipes_hni
ENSSBOG00000034938	LSG1	98	64.286	ENSORLG00015012025	lsg1	99	63.775	Oryzias_latipes_hsok
ENSSBOG00000034938	LSG1	98	62.791	ENSOMEG00000022379	lsg1	99	63.222	Oryzias_melastigma
ENSSBOG00000034938	LSG1	100	86.858	ENSOGAG00000003475	LSG1	100	86.858	Otolemur_garnettii
ENSSBOG00000034938	LSG1	99	84.825	ENSOARG00000020403	LSG1	99	84.219	Ovis_aries
ENSSBOG00000034938	LSG1	100	93.313	ENSPPAG00000029271	LSG1	100	93.313	Pan_paniscus
ENSSBOG00000034938	LSG1	99	85.865	ENSPPRG00000010281	LSG1	99	85.865	Panthera_pardus
ENSSBOG00000034938	LSG1	99	86.626	ENSPTIG00000010789	LSG1	99	86.626	Panthera_tigris_altaica
ENSSBOG00000034938	LSG1	100	93.313	ENSPTRG00000015760	LSG1	100	93.313	Pan_troglodytes
ENSSBOG00000034938	LSG1	100	93.769	ENSPANG00000018249	LSG1	100	92.097	Papio_anubis
ENSSBOG00000034938	LSG1	96	65.204	ENSPKIG00000002895	lsg1	100	64.006	Paramormyrops_kingsleyae
ENSSBOG00000034938	LSG1	96	65.480	ENSPSIG00000009821	LSG1	99	64.861	Pelodiscus_sinensis
ENSSBOG00000034938	LSG1	95	65.127	ENSPMGG00000000931	lsg1	99	64.196	Periophthalmus_magnuspinnatus
ENSSBOG00000034938	LSG1	100	82.628	ENSPEMG00000012082	-	100	82.175	Peromyscus_maniculatus_bairdii
ENSSBOG00000034938	LSG1	99	60.029	ENSPMAG00000007451	lsg1	99	59.942	Petromyzon_marinus
ENSSBOG00000034938	LSG1	99	66.839	ENSPCIG00000013890	LSG1	82	66.839	Phascolarctos_cinereus
ENSSBOG00000034938	LSG1	97	66.047	ENSPFOG00000021882	lsg1	99	65.512	Poecilia_formosa
ENSSBOG00000034938	LSG1	97	64.651	ENSPLAG00000019536	lsg1	99	64.662	Poecilia_latipinna
ENSSBOG00000034938	LSG1	97	65.224	ENSPMEG00000017281	lsg1	99	64.715	Poecilia_mexicana
ENSSBOG00000034938	LSG1	97	55.793	ENSPREG00000006048	lsg1	99	55.621	Poecilia_reticulata
ENSSBOG00000034938	LSG1	92	92.751	ENSPPYG00000014425	LSG1	100	91.928	Pongo_abelii
ENSSBOG00000034938	LSG1	90	88.000	ENSPCAG00000005511	LSG1	90	88.000	Procavia_capensis
ENSSBOG00000034938	LSG1	100	88.467	ENSPCOG00000012360	LSG1	100	88.467	Propithecus_coquereli
ENSSBOG00000034938	LSG1	99	64.350	ENSPNYG00000021994	lsg1	99	64.955	Pundamilia_nyererei
ENSSBOG00000034938	LSG1	99	65.315	ENSPNAG00000015533	lsg1	99	65.053	Pygocentrus_nattereri
ENSSBOG00000034938	LSG1	100	82.805	ENSRNOG00000001727	Lsg1	100	82.805	Rattus_norvegicus
ENSSBOG00000034938	LSG1	100	93.313	ENSRBIG00000029053	LSG1	100	93.313	Rhinopithecus_bieti
ENSSBOG00000034938	LSG1	100	93.313	ENSRROG00000037702	LSG1	100	93.313	Rhinopithecus_roxellana
ENSSBOG00000034938	LSG1	74	45.887	YGL099W	LSG1	74	46.320	Saccharomyces_cerevisiae
ENSSBOG00000034938	LSG1	78	66.919	ENSSHAG00000003487	LSG1	99	66.165	Sarcophilus_harrisii
ENSSBOG00000034938	LSG1	98	65.170	ENSSFOG00015008955	lsg1	99	64.448	Scleropages_formosus
ENSSBOG00000034938	LSG1	98	64.939	ENSSDUG00000004622	lsg1	99	64.599	Seriola_dumerili
ENSSBOG00000034938	LSG1	98	64.969	ENSSLDG00000010869	lsg1	99	64.384	Seriola_lalandi_dorsalis
ENSSBOG00000034938	LSG1	81	83.529	ENSSARG00000012981	LSG1	81	83.529	Sorex_araneus
ENSSBOG00000034938	LSG1	99	68.168	ENSSPUG00000016347	LSG1	99	67.766	Sphenodon_punctatus
ENSSBOG00000034938	LSG1	99	63.788	ENSSPAG00000005508	lsg1	99	63.238	Stegastes_partitus
ENSSBOG00000034938	LSG1	99	84.347	ENSSSCG00000011827	LSG1	99	83.739	Sus_scrofa
ENSSBOG00000034938	LSG1	89	64.370	ENSTGUG00000009068	LSG1	99	63.866	Taeniopygia_guttata
ENSSBOG00000034938	LSG1	97	62.402	ENSTRUG00000017380	lsg1	99	60.514	Takifugu_rubripes
ENSSBOG00000034938	LSG1	97	65.123	ENSTNIG00000015570	lsg1	99	63.746	Tetraodon_nigroviridis
ENSSBOG00000034938	LSG1	99	77.845	ENSTTRG00000000559	LSG1	99	76.935	Tursiops_truncatus
ENSSBOG00000034938	LSG1	99	84.498	ENSUAMG00000012454	LSG1	99	84.498	Ursus_americanus
ENSSBOG00000034938	LSG1	99	84.498	ENSUMAG00000000855	LSG1	99	84.498	Ursus_maritimus
ENSSBOG00000034938	LSG1	95	81.280	ENSVPAG00000012400	LSG1	99	81.280	Vicugna_pacos
ENSSBOG00000034938	LSG1	95	84.640	ENSVVUG00000008956	LSG1	97	84.640	Vulpes_vulpes
ENSSBOG00000034938	LSG1	99	66.617	ENSXETG00000003451	lsg1	99	66.667	Xenopus_tropicalis
ENSSBOG00000034938	LSG1	97	64.961	ENSXCOG00000003239	lsg1	99	64.060	Xiphophorus_couchianus
ENSSBOG00000034938	LSG1	97	64.798	ENSXMAG00000005536	lsg1	99	64.048	Xiphophorus_maculatus