EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000035309 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 1131 bases
Position: chrJH378170.1:483755-484885
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000038495	KH_1	PF00013.29	4.1e-43	1	3
ENSSBOP00000038495	KH_1	PF00013.29	4.1e-43	2	3
ENSSBOP00000038495	KH_1	PF00013.29	4.1e-43	3	3
ENSSBOP00000038488	KH_1	PF00013.29	4.7e-43	1	3
ENSSBOP00000038488	KH_1	PF00013.29	4.7e-43	2	3
ENSSBOP00000038488	KH_1	PF00013.29	4.7e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000055440	-	1026	XM_003934467	ENSSBOP00000038488	341 (aa)	XP_003934516	A0A2K6V2U3
ENSSBOT00000055447	-	993	-	ENSSBOP00000038495	330 (aa)	-	A0A2K6V321

Gene Model

Click here to download ENSSBOG00000035309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000035309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000035309	-	89	35.821	ENSSBOG00000034871	KHSRP	60	36.250
ENSSBOG00000035309	-	94	77.778	ENSSBOG00000020308	PCBP2	100	77.778
ENSSBOG00000035309	-	85	41.176	ENSSBOG00000027191	-	64	41.176
ENSSBOG00000035309	-	90	30.147	ENSSBOG00000020973	IGF2BP1	59	30.147
ENSSBOG00000035309	-	73	40.541	ENSSBOG00000034029	NOVA1	57	40.541
ENSSBOG00000035309	-	94	68.519	ENSSBOG00000005789	PCBP3	91	68.519
ENSSBOG00000035309	-	91	55.591	ENSSBOG00000027029	PCBP4	80	51.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000035309	-	94	83.427	ENSG00000169564	PCBP1	100	83.427	Homo_sapiens
ENSSBOG00000035309	-	94	85.838	ENSAMEG00000016094	PCBP1	100	85.838	Ailuropoda_melanoleuca
ENSSBOG00000035309	-	94	82.282	ENSANAG00000033377	-	100	82.282	Aotus_nancymaae
ENSSBOG00000035309	-	91	80.636	ENSANAG00000026989	-	99	80.636	Aotus_nancymaae
ENSSBOG00000035309	-	82	86.477	ENSANAG00000027108	-	100	86.477	Aotus_nancymaae
ENSSBOG00000035309	-	94	73.256	ENSANAG00000026077	-	100	73.256	Aotus_nancymaae
ENSSBOG00000035309	-	73	81.618	ENSANAG00000022494	-	100	81.618	Aotus_nancymaae
ENSSBOG00000035309	-	73	79.505	ENSANAG00000031745	-	100	79.505	Aotus_nancymaae
ENSSBOG00000035309	-	73	77.032	ENSANAG00000019364	-	100	77.032	Aotus_nancymaae
ENSSBOG00000035309	-	94	73.876	ENSANAG00000023938	-	100	73.876	Aotus_nancymaae
ENSSBOG00000035309	-	85	82.099	ENSBTAG00000008985	PCBP1	99	82.099	Bos_taurus
ENSSBOG00000035309	-	100	79.521	ENSCJAG00000038388	-	100	79.521	Callithrix_jacchus
ENSSBOG00000035309	-	94	83.427	ENSCAFG00000003326	PCBP1	100	83.427	Canis_familiaris
ENSSBOG00000035309	-	94	83.427	ENSCHIG00000007923	PCBP1	100	83.427	Capra_hircus
ENSSBOG00000035309	-	94	82.865	ENSTSYG00000027848	PCBP1	100	82.865	Carlito_syrichta
ENSSBOG00000035309	-	94	83.427	ENSCPOG00000013511	PCBP1	100	83.427	Cavia_porcellus
ENSSBOG00000035309	-	94	88.854	ENSCCAG00000029186	-	98	88.854	Cebus_capucinus
ENSSBOG00000035309	-	94	83.427	ENSCCAG00000019842	-	100	83.427	Cebus_capucinus
ENSSBOG00000035309	-	94	83.427	ENSCATG00000015029	PCBP1	100	83.427	Cercocebus_atys
ENSSBOG00000035309	-	94	83.146	ENSCLAG00000017909	PCBP1	100	83.146	Chinchilla_lanigera
ENSSBOG00000035309	-	94	83.427	ENSCSAG00000019441	PCBP1	100	83.427	Chlorocebus_sabaeus
ENSSBOG00000035309	-	100	80.580	ENSCANG00000032470	-	100	80.580	Colobus_angolensis_palliatus
ENSSBOG00000035309	-	65	65.490	ENSCANG00000033810	-	87	65.490	Colobus_angolensis_palliatus
ENSSBOG00000035309	-	94	83.427	ENSCANG00000018039	-	100	83.427	Colobus_angolensis_palliatus
ENSSBOG00000035309	-	94	83.427	ENSCGRG00001015078	Pcbp1	100	83.427	Cricetulus_griseus_chok1gshd
ENSSBOG00000035309	-	94	83.427	ENSCGRG00000018899	Pcbp1	100	83.427	Cricetulus_griseus_crigri
ENSSBOG00000035309	-	73	80.702	ENSDNOG00000036372	PCBP1	99	80.702	Dasypus_novemcinctus
ENSSBOG00000035309	-	94	83.427	ENSDORG00000008216	Pcbp1	100	83.427	Dipodomys_ordii
ENSSBOG00000035309	-	94	83.427	ENSFCAG00000022238	PCBP1	100	83.427	Felis_catus
ENSSBOG00000035309	-	94	83.146	ENSFDAG00000019637	PCBP1	100	83.146	Fukomys_damarensis
ENSSBOG00000035309	-	94	83.427	ENSGGOG00000028130	PCBP1	100	83.427	Gorilla_gorilla
ENSSBOG00000035309	-	94	83.146	ENSHGLG00000020345	Pcbp1	100	83.146	Heterocephalus_glaber_female
ENSSBOG00000035309	-	94	81.461	ENSHGLG00000020243	-	100	81.461	Heterocephalus_glaber_female
ENSSBOG00000035309	-	94	83.146	ENSHGLG00100019761	Pcbp1	100	83.146	Heterocephalus_glaber_male
ENSSBOG00000035309	-	94	82.865	ENSHGLG00100019620	-	100	82.865	Heterocephalus_glaber_male
ENSSBOG00000035309	-	94	83.427	ENSSTOG00000026002	PCBP1	100	83.427	Ictidomys_tridecemlineatus
ENSSBOG00000035309	-	94	83.427	ENSJJAG00000000737	Pcbp1	100	83.427	Jaculus_jaculus
ENSSBOG00000035309	-	89	89.735	ENSMFAG00000003400	PCBP1	100	89.735	Macaca_fascicularis
ENSSBOG00000035309	-	94	83.427	ENSMMUG00000038295	PCBP1	100	83.427	Macaca_mulatta
ENSSBOG00000035309	-	94	83.427	ENSMNEG00000002934	PCBP1	100	83.427	Macaca_nemestrina
ENSSBOG00000035309	-	94	83.427	ENSMLEG00000027389	PCBP1	100	83.427	Mandrillus_leucophaeus
ENSSBOG00000035309	-	94	83.146	ENSMAUG00000009843	Pcbp1	100	83.146	Mesocricetus_auratus
ENSSBOG00000035309	-	94	83.427	ENSMICG00000038221	PCBP1	100	83.427	Microcebus_murinus
ENSSBOG00000035309	-	94	83.427	ENSMOCG00000008102	Pcbp1	100	83.427	Microtus_ochrogaster
ENSSBOG00000035309	-	94	83.427	MGP_CAROLIEiJ_G0028598	Pcbp1	100	83.427	Mus_caroli
ENSSBOG00000035309	-	94	83.427	ENSMUSG00000051695	Pcbp1	100	83.427	Mus_musculus
ENSSBOG00000035309	-	94	83.427	MGP_PahariEiJ_G0022335	Pcbp1	100	83.427	Mus_pahari
ENSSBOG00000035309	-	94	83.427	MGP_SPRETEiJ_G0029609	Pcbp1	100	83.427	Mus_spretus
ENSSBOG00000035309	-	94	85.838	ENSMPUG00000007175	PCBP1	100	85.838	Mustela_putorius_furo
ENSSBOG00000035309	-	94	83.427	ENSMLUG00000014173	PCBP1	100	83.427	Myotis_lucifugus
ENSSBOG00000035309	-	94	83.427	ENSNGAG00000011957	-	100	83.427	Nannospalax_galili
ENSSBOG00000035309	-	94	83.427	ENSNGAG00000014909	-	100	83.427	Nannospalax_galili
ENSSBOG00000035309	-	94	83.427	ENSNLEG00000018722	PCBP1	100	83.427	Nomascus_leucogenys
ENSSBOG00000035309	-	94	70.655	ENSODEG00000000263	PCBP1	100	70.655	Octodon_degus
ENSSBOG00000035309	-	94	83.427	ENSOCUG00000003634	PCBP1	100	83.427	Oryctolagus_cuniculus
ENSSBOG00000035309	-	94	85.838	ENSOGAG00000028946	PCBP1	100	85.838	Otolemur_garnettii
ENSSBOG00000035309	-	94	83.427	ENSOARG00000019516	PCBP1	100	83.427	Ovis_aries
ENSSBOG00000035309	-	94	81.742	ENSPPAG00000036116	PCBP1	99	81.742	Pan_paniscus
ENSSBOG00000035309	-	94	83.427	ENSPPRG00000020533	PCBP1	100	83.427	Panthera_pardus
ENSSBOG00000035309	-	94	83.427	ENSPTIG00000007318	PCBP1	100	83.427	Panthera_tigris_altaica
ENSSBOG00000035309	-	94	83.427	ENSPTRG00000012025	PCBP1	100	83.427	Pan_troglodytes
ENSSBOG00000035309	-	94	83.427	ENSPANG00000011314	PCBP1	100	83.427	Papio_anubis
ENSSBOG00000035309	-	94	83.427	ENSPPYG00000012328	PCBP1	100	83.427	Pongo_abelii
ENSSBOG00000035309	-	94	83.427	ENSPCOG00000026934	PCBP1	100	83.427	Propithecus_coquereli
ENSSBOG00000035309	-	87	81.325	ENSRROG00000012514	-	100	81.325	Rhinopithecus_roxellana
ENSSBOG00000035309	-	100	82.447	ENSRROG00000009684	-	100	82.447	Rhinopithecus_roxellana
ENSSBOG00000035309	-	94	83.427	ENSSSCG00000027224	PCBP1	100	83.427	Sus_scrofa
ENSSBOG00000035309	-	84	82.043	ENSVVUG00000028033	PCBP1	99	82.043	Vulpes_vulpes