EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000035402 (Gene tree)
Gene ID: 101050427
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 17739 bases
Position: chrJH378315.1:796818-814556
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000038676	tRNA-synt_1g	PF09334.11	5.9e-11	1	1
ENSSBOP00000038676	Anticodon_1	PF08264.13	9.1e-33	1	1
ENSSBOP00000038676	tRNA-synt_1	PF00133.22	5.2e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000055631	VARS-201	4288	XM_003944331	ENSSBOP00000038676	1264 (aa)	XP_003944380	A0A2K6V3D5

Gene Model

Click here to download ENSSBOG00000035402's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000035402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000035402	VARS	81	49.668	ENSSBOG00000033240	VARS2	89	50.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000035402	VARS	100	97.389	ENSG00000204394	VARS	100	97.389	Homo_sapiens
ENSSBOG00000035402	VARS	98	64.314	ENSAPOG00000020691	vars	99	64.074	Acanthochromis_polyacanthus
ENSSBOG00000035402	VARS	98	64.314	ENSAPOG00000020921	vars	99	64.074	Acanthochromis_polyacanthus
ENSSBOG00000035402	VARS	100	94.625	ENSAMEG00000006417	VARS	100	94.625	Ailuropoda_melanoleuca
ENSSBOG00000035402	VARS	100	65.176	ENSACIG00000013752	vars	100	64.937	Amphilophus_citrinellus
ENSSBOG00000035402	VARS	100	64.003	ENSAOCG00000002447	vars	100	63.651	Amphiprion_ocellaris
ENSSBOG00000035402	VARS	100	64.003	ENSAPEG00000010638	vars	99	64.019	Amphiprion_percula
ENSSBOG00000035402	VARS	100	64.539	ENSATEG00000020219	vars	100	64.303	Anabas_testudineus
ENSSBOG00000035402	VARS	90	70.078	ENSACAG00000029133	-	99	69.905	Anolis_carolinensis
ENSSBOG00000035402	VARS	100	98.339	ENSANAG00000015453	VARS	100	98.339	Aotus_nancymaae
ENSSBOG00000035402	VARS	100	64.574	ENSACLG00000025699	vars	97	64.336	Astatotilapia_calliptera
ENSSBOG00000035402	VARS	94	65.721	ENSAMXG00000017716	vars	95	65.721	Astyanax_mexicanus
ENSSBOG00000035402	VARS	100	94.937	ENSBTAG00000005631	VARS	100	94.937	Bos_taurus
ENSSBOG00000035402	VARS	100	98.418	ENSCJAG00000002604	VARS	100	98.418	Callithrix_jacchus
ENSSBOG00000035402	VARS	100	93.908	ENSCAFG00000000636	VARS	100	93.908	Canis_familiaris
ENSSBOG00000035402	VARS	94	93.919	ENSCAFG00020020790	VARS	96	93.919	Canis_lupus_dingo
ENSSBOG00000035402	VARS	100	95.253	ENSCHIG00000011008	VARS	100	95.253	Capra_hircus
ENSSBOG00000035402	VARS	100	96.123	ENSTSYG00000001567	VARS	100	96.123	Carlito_syrichta
ENSSBOG00000035402	VARS	91	90.830	ENSCAPG00000013736	VARS	99	90.830	Cavia_aperea
ENSSBOG00000035402	VARS	100	91.851	ENSCPOG00000000870	VARS	100	91.851	Cavia_porcellus
ENSSBOG00000035402	VARS	100	98.497	ENSCCAG00000035656	VARS	100	98.507	Cebus_capucinus
ENSSBOG00000035402	VARS	100	96.915	ENSCATG00000022394	VARS	100	96.915	Cercocebus_atys
ENSSBOG00000035402	VARS	88	89.064	ENSCLAG00000009470	VARS	92	89.064	Chinchilla_lanigera
ENSSBOG00000035402	VARS	100	97.231	ENSCSAG00000008784	VARS	100	97.231	Chlorocebus_sabaeus
ENSSBOG00000035402	VARS	77	73.922	ENSCPBG00000007943	VARS	96	74.025	Chrysemys_picta_bellii
ENSSBOG00000035402	VARS	100	97.073	ENSCANG00000033570	VARS	100	97.073	Colobus_angolensis_palliatus
ENSSBOG00000035402	VARS	100	92.642	ENSCGRG00001005686	Vars	100	92.642	Cricetulus_griseus_chok1gshd
ENSSBOG00000035402	VARS	92	87.521	ENSCGRG00000013352	Vars	78	87.521	Cricetulus_griseus_crigri
ENSSBOG00000035402	VARS	100	64.348	ENSCSEG00000019652	vars	100	64.190	Cynoglossus_semilaevis
ENSSBOG00000035402	VARS	100	65.035	ENSCVAG00000022398	vars	100	65.035	Cyprinodon_variegatus
ENSSBOG00000035402	VARS	100	64.264	ENSDARG00000044575	vars	100	64.258	Danio_rerio
ENSSBOG00000035402	VARS	84	93.227	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSSBOG00000035402	VARS	69	86.438	ENSETEG00000003824	VARS	76	86.438	Echinops_telfairi
ENSSBOG00000035402	VARS	50	70.471	ENSEBUG00000007086	vars	84	69.459	Eptatretus_burgeri
ENSSBOG00000035402	VARS	57	61.676	ENSEBUG00000004637	vars	100	61.951	Eptatretus_burgeri
ENSSBOG00000035402	VARS	100	95.886	ENSEASG00005015673	VARS	100	95.886	Equus_asinus_asinus
ENSSBOG00000035402	VARS	100	94.862	ENSECAG00000014620	VARS	100	95.336	Equus_caballus
ENSSBOG00000035402	VARS	83	92.388	ENSEEUG00000004116	VARS	83	92.388	Erinaceus_europaeus
ENSSBOG00000035402	VARS	100	64.164	ENSELUG00000006550	vars	97	64.164	Esox_lucius
ENSSBOG00000035402	VARS	100	94.699	ENSFCAG00000004510	VARS	100	94.699	Felis_catus
ENSSBOG00000035402	VARS	82	91.959	ENSFDAG00000011401	VARS	100	91.959	Fukomys_damarensis
ENSSBOG00000035402	VARS	100	65.167	ENSFHEG00000010672	vars	100	65.167	Fundulus_heteroclitus
ENSSBOG00000035402	VARS	92	65.698	ENSGMOG00000014908	vars	97	65.698	Gadus_morhua
ENSSBOG00000035402	VARS	100	65.292	ENSGAFG00000021630	vars	100	65.292	Gambusia_affinis
ENSSBOG00000035402	VARS	92	66.082	ENSGACG00000009601	vars	98	65.750	Gasterosteus_aculeatus
ENSSBOG00000035402	VARS	50	64.826	ENSGAGG00000006508	-	91	64.511	Gopherus_agassizii
ENSSBOG00000035402	VARS	100	97.547	ENSGGOG00000011364	VARS	100	97.547	Gorilla_gorilla
ENSSBOG00000035402	VARS	100	64.496	ENSHBUG00000017151	vars	97	64.258	Haplochromis_burtoni
ENSSBOG00000035402	VARS	100	90.665	ENSHGLG00000011646	VARS	100	90.348	Heterocephalus_glaber_female
ENSSBOG00000035402	VARS	93	83.223	ENSHGLG00100018062	VARS	100	83.140	Heterocephalus_glaber_male
ENSSBOG00000035402	VARS	99	64.136	ENSHCOG00000012198	vars	99	64.152	Hippocampus_comes
ENSSBOG00000035402	VARS	100	64.903	ENSIPUG00000005218	vars	100	64.903	Ictalurus_punctatus
ENSSBOG00000035402	VARS	100	94.308	ENSSTOG00000013112	VARS	100	94.308	Ictidomys_tridecemlineatus
ENSSBOG00000035402	VARS	100	71.994	ENSJJAG00000015343	-	100	71.994	Jaculus_jaculus
ENSSBOG00000035402	VARS	100	91.218	ENSJJAG00000019749	-	100	90.585	Jaculus_jaculus
ENSSBOG00000035402	VARS	100	64.929	ENSKMAG00000009455	vars	100	64.692	Kryptolebias_marmoratus
ENSSBOG00000035402	VARS	100	64.427	ENSLBEG00000010341	vars	100	64.190	Labrus_bergylta
ENSSBOG00000035402	VARS	94	61.956	ENSLACG00000015232	VARS	99	62.531	Latimeria_chalumnae
ENSSBOG00000035402	VARS	100	66.484	ENSLOCG00000004240	vars	100	66.250	Lepisosteus_oculatus
ENSSBOG00000035402	VARS	100	93.513	ENSLAFG00000023090	VARS	100	93.117	Loxodonta_africana
ENSSBOG00000035402	VARS	100	97.231	ENSMFAG00000001032	VARS	100	97.231	Macaca_fascicularis
ENSSBOG00000035402	VARS	100	97.231	ENSMMUG00000006828	VARS	100	97.231	Macaca_mulatta
ENSSBOG00000035402	VARS	100	97.152	ENSMNEG00000042072	VARS	100	97.152	Macaca_nemestrina
ENSSBOG00000035402	VARS	100	96.915	ENSMLEG00000039307	VARS	100	96.915	Mandrillus_leucophaeus
ENSSBOG00000035402	VARS	100	64.376	ENSMAMG00000003949	vars	100	64.509	Mastacembelus_armatus
ENSSBOG00000035402	VARS	100	64.574	ENSMZEG00005018327	vars	100	64.088	Maylandia_zebra
ENSSBOG00000035402	VARS	100	92.089	ENSMAUG00000006715	Vars	100	92.089	Mesocricetus_auratus
ENSSBOG00000035402	VARS	100	94.699	ENSMICG00000003548	VARS	100	95.522	Microcebus_murinus
ENSSBOG00000035402	VARS	100	89.794	ENSMOCG00000015404	Vars	100	89.636	Microtus_ochrogaster
ENSSBOG00000035402	VARS	100	63.815	ENSMMOG00000015801	vars	100	63.815	Mola_mola
ENSSBOG00000035402	VARS	100	86.709	ENSMODG00000015204	-	100	86.709	Monodelphis_domestica
ENSSBOG00000035402	VARS	99	64.359	ENSMALG00000022532	vars	99	64.224	Monopterus_albus
ENSSBOG00000035402	VARS	100	92.722	MGP_CAROLIEiJ_G0021491	Vars	100	92.247	Mus_caroli
ENSSBOG00000035402	VARS	100	92.722	ENSMUSG00000007029	Vars	100	92.247	Mus_musculus
ENSSBOG00000035402	VARS	100	92.247	MGP_PahariEiJ_G0020486	Vars	100	91.851	Mus_pahari
ENSSBOG00000035402	VARS	100	92.801	MGP_SPRETEiJ_G0022396	Vars	100	92.326	Mus_spretus
ENSSBOG00000035402	VARS	100	94.541	ENSMPUG00000010821	VARS	100	94.541	Mustela_putorius_furo
ENSSBOG00000035402	VARS	78	92.814	ENSMLUG00000013126	VARS	100	93.421	Myotis_lucifugus
ENSSBOG00000035402	VARS	100	91.772	ENSNGAG00000012151	Vars	100	92.089	Nannospalax_galili
ENSSBOG00000035402	VARS	100	64.419	ENSNBRG00000020520	vars	100	64.180	Neolamprologus_brichardi
ENSSBOG00000035402	VARS	100	96.835	ENSNLEG00000006351	VARS	100	96.835	Nomascus_leucogenys
ENSSBOG00000035402	VARS	100	82.991	ENSMEUG00000011378	VARS	100	82.991	Notamacropus_eugenii
ENSSBOG00000035402	VARS	100	93.592	ENSOPRG00000003607	VARS	100	93.592	Ochotona_princeps
ENSSBOG00000035402	VARS	100	90.981	ENSODEG00000017681	VARS	100	90.427	Octodon_degus
ENSSBOG00000035402	VARS	100	65.051	ENSONIG00000013064	vars	99	67.565	Oreochromis_niloticus
ENSSBOG00000035402	VARS	77	78.359	ENSOANG00000005400	VARS	98	77.553	Ornithorhynchus_anatinus
ENSSBOG00000035402	VARS	100	91.404	ENSOCUG00000022463	VARS	100	91.562	Oryctolagus_cuniculus
ENSSBOG00000035402	VARS	100	63.761	ENSORLG00000013063	vars	100	63.776	Oryzias_latipes
ENSSBOG00000035402	VARS	100	64.302	ENSORLG00020003504	vars	100	64.302	Oryzias_latipes_hni
ENSSBOG00000035402	VARS	100	64.198	ENSORLG00015009001	vars	100	64.198	Oryzias_latipes_hsok
ENSSBOG00000035402	VARS	100	64.198	ENSOMEG00000015016	vars	100	64.198	Oryzias_melastigma
ENSSBOG00000035402	VARS	100	94.699	ENSOGAG00000007515	VARS	100	94.699	Otolemur_garnettii
ENSSBOG00000035402	VARS	100	97.627	ENSPPAG00000034012	VARS	100	97.627	Pan_paniscus
ENSSBOG00000035402	VARS	100	94.858	ENSPPRG00000014855	VARS	100	94.858	Panthera_pardus
ENSSBOG00000035402	VARS	85	94.888	ENSPTIG00000010462	VARS	95	94.872	Panthera_tigris_altaica
ENSSBOG00000035402	VARS	100	97.547	ENSPTRG00000017985	VARS	100	97.547	Pan_troglodytes
ENSSBOG00000035402	VARS	100	95.347	ENSPANG00000014565	VARS	100	95.347	Papio_anubis
ENSSBOG00000035402	VARS	100	63.784	ENSPKIG00000016304	vars	100	63.784	Paramormyrops_kingsleyae
ENSSBOG00000035402	VARS	100	65.485	ENSPMGG00000023909	vars	100	65.327	Periophthalmus_magnuspinnatus
ENSSBOG00000035402	VARS	100	93.354	ENSPEMG00000006639	Vars	100	93.354	Peromyscus_maniculatus_bairdii
ENSSBOG00000035402	VARS	100	86.076	ENSPCIG00000018553	VARS	100	86.076	Phascolarctos_cinereus
ENSSBOG00000035402	VARS	100	65.447	ENSPFOG00000015690	vars	100	65.447	Poecilia_formosa
ENSSBOG00000035402	VARS	100	66.011	ENSPLAG00000009590	vars	100	65.696	Poecilia_latipinna
ENSSBOG00000035402	VARS	100	65.447	ENSPMEG00000004708	vars	100	65.447	Poecilia_mexicana
ENSSBOG00000035402	VARS	100	63.887	ENSPREG00000013264	vars	98	72.393	Poecilia_reticulata
ENSSBOG00000035402	VARS	100	95.807	ENSPPYG00000016460	VARS	100	95.807	Pongo_abelii
ENSSBOG00000035402	VARS	86	92.819	ENSPCAG00000013565	VARS	86	92.819	Procavia_capensis
ENSSBOG00000035402	VARS	100	95.257	ENSPCOG00000010942	VARS	100	95.731	Propithecus_coquereli
ENSSBOG00000035402	VARS	100	90.981	ENSPVAG00000012403	VARS	100	90.981	Pteropus_vampyrus
ENSSBOG00000035402	VARS	100	64.496	ENSPNYG00000022511	vars	100	64.258	Pundamilia_nyererei
ENSSBOG00000035402	VARS	100	64.391	ENSPNAG00000020962	vars	100	64.236	Pygocentrus_nattereri
ENSSBOG00000035402	VARS	100	93.117	ENSRNOG00000000867	Vars	100	93.117	Rattus_norvegicus
ENSSBOG00000035402	VARS	100	97.310	ENSRBIG00000041669	VARS	100	97.310	Rhinopithecus_bieti
ENSSBOG00000035402	VARS	100	97.310	ENSRROG00000045490	VARS	100	97.310	Rhinopithecus_roxellana
ENSSBOG00000035402	VARS	100	81.304	ENSSHAG00000006937	VARS	100	81.540	Sarcophilus_harrisii
ENSSBOG00000035402	VARS	100	64.374	ENSSFOG00015014272	vars	100	64.219	Scleropages_formosus
ENSSBOG00000035402	VARS	100	63.390	ENSSMAG00000009596	vars	99	63.227	Scophthalmus_maximus
ENSSBOG00000035402	VARS	100	64.241	ENSSDUG00000014177	vars	100	64.003	Seriola_dumerili
ENSSBOG00000035402	VARS	100	64.087	ENSSLDG00000025316	vars	100	63.848	Seriola_lalandi_dorsalis
ENSSBOG00000035402	VARS	100	64.455	ENSSPAG00000017068	vars	100	64.330	Stegastes_partitus
ENSSBOG00000035402	VARS	100	93.043	ENSSSCG00000038950	VARS	100	93.518	Sus_scrofa
ENSSBOG00000035402	VARS	82	64.238	ENSTRUG00000012307	vars	97	64.279	Takifugu_rubripes
ENSSBOG00000035402	VARS	100	64.619	ENSTNIG00000008011	vars	100	64.458	Tetraodon_nigroviridis
ENSSBOG00000035402	VARS	54	97.378	ENSTBEG00000004728	-	60	97.378	Tupaia_belangeri
ENSSBOG00000035402	VARS	100	86.155	ENSTTRG00000014128	VARS	100	86.155	Tursiops_truncatus
ENSSBOG00000035402	VARS	100	91.195	ENSUAMG00000010424	VARS	100	91.195	Ursus_americanus
ENSSBOG00000035402	VARS	93	94.127	ENSUMAG00000013486	VARS	98	93.651	Ursus_maritimus
ENSSBOG00000035402	VARS	100	93.755	ENSVVUG00000021323	VARS	100	93.518	Vulpes_vulpes
ENSSBOG00000035402	VARS	96	62.490	ENSXETG00000024076	vars	98	61.650	Xenopus_tropicalis
ENSSBOG00000035402	VARS	100	65.197	ENSXCOG00000019172	vars	100	65.197	Xiphophorus_couchianus
ENSSBOG00000035402	VARS	100	65.058	ENSXMAG00000010927	vars	100	65.058	Xiphophorus_maculatus