EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000035419 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 5606 bases
Position: chrJH378216.1:6586718-6592323
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000038710	MMR_HSR1	PF01926.23	0.00011	1	1
ENSSBOP00000038711	MMR_HSR1	PF01926.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000055666	RAB5B-202	450	-	ENSSBOP00000038711	149 (aa)	-	A0A2K6V3G9
ENSSBOT00000055665	RAB5B-201	573	-	ENSSBOP00000038710	190 (aa)	-	A0A2K6V3M4
ENSSBOT00000055670	RAB5B-203	189	-	ENSSBOP00000038715	62 (aa)	-	A0A2K6V3M7

Gene Model

Click here to download ENSSBOG00000035419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000035419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000035419	RAB5B	81	38.312	ENSSBOG00000008843	RAB15	73	38.312
ENSSBOG00000035419	RAB5B	81	35.484	ENSSBOG00000033237	RAB23	65	35.484
ENSSBOG00000035419	RAB5B	83	46.497	ENSSBOG00000017326	RAB11A	73	46.497
ENSSBOG00000035419	RAB5B	61	40.870	ENSSBOG00000034839	RAB2B	65	40.870
ENSSBOG00000035419	RAB5B	97	73.206	ENSSBOG00000032552	-	97	73.206
ENSSBOG00000035419	RAB5B	61	38.983	ENSSBOG00000033266	-	50	38.983
ENSSBOG00000035419	RAB5B	63	31.959	ENSSBOG00000029883	RAB34	55	31.959
ENSSBOG00000035419	RAB5B	83	32.500	ENSSBOG00000022477	KRAS	85	32.099
ENSSBOG00000035419	RAB5B	86	39.286	ENSSBOG00000026403	RAB30	83	39.286
ENSSBOG00000035419	RAB5B	87	40.964	ENSSBOG00000025313	RAB2A	78	40.964
ENSSBOG00000035419	RAB5B	83	46.250	ENSSBOG00000033554	RAB1B	78	46.250
ENSSBOG00000035419	RAB5B	84	42.767	ENSSBOG00000027362	RAB14	74	42.767
ENSSBOG00000035419	RAB5B	84	40.000	ENSSBOG00000014322	RAB7A	79	40.000
ENSSBOG00000035419	RAB5B	82	45.513	ENSSBOG00000032178	RAB6B	75	45.513
ENSSBOG00000035419	RAB5B	87	31.548	ENSSBOG00000021039	NRAS	93	31.548
ENSSBOG00000035419	RAB5B	84	36.196	ENSSBOG00000021125	RAB12	62	36.196
ENSSBOG00000035419	RAB5B	85	37.195	ENSSBOG00000025110	RAB39B	77	37.195
ENSSBOG00000035419	RAB5B	87	41.954	ENSSBOG00000032212	RAB25	82	41.954
ENSSBOG00000035419	RAB5B	83	35.802	ENSSBOG00000025176	RAB33A	68	35.802
ENSSBOG00000035419	RAB5B	84	34.568	ENSSBOG00000034195	RERG	80	34.568
ENSSBOG00000035419	RAB5B	63	47.475	ENSSBOG00000028389	RAB6A	69	45.082
ENSSBOG00000035419	RAB5B	84	38.889	ENSSBOG00000020342	-	79	38.889
ENSSBOG00000035419	RAB5B	82	37.888	ENSSBOG00000018817	RAB9A	80	37.888
ENSSBOG00000035419	RAB5B	83	33.125	ENSSBOG00000023272	HRAS	87	33.113
ENSSBOG00000035419	RAB5B	88	44.311	ENSSBOG00000035094	RAB11B	93	44.311
ENSSBOG00000035419	RAB5B	87	37.725	ENSSBOG00000028836	RAB33B	72	37.725
ENSSBOG00000035419	RAB5B	83	46.875	ENSSBOG00000023732	RAB1A	77	46.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000035419	RAB5B	100	83.256	ENSG00000111540	RAB5B	100	91.304	Homo_sapiens
ENSSBOG00000035419	RAB5B	100	82.488	ENSAMEG00000003196	RAB5B	100	82.488	Ailuropoda_melanoleuca
ENSSBOG00000035419	RAB5B	100	81.395	ENSACAG00000005380	RAB5B	100	81.395	Anolis_carolinensis
ENSSBOG00000035419	RAB5B	100	83.256	ENSANAG00000033215	RAB5B	95	83.256	Aotus_nancymaae
ENSSBOG00000035419	RAB5B	100	83.256	ENSBTAG00000014129	RAB5B	100	83.256	Bos_taurus
ENSSBOG00000035419	RAB5B	100	83.256	ENSCJAG00000041780	RAB5B	95	83.256	Callithrix_jacchus
ENSSBOG00000035419	RAB5B	100	83.256	ENSCAFG00000000087	RAB5B	100	83.256	Canis_familiaris
ENSSBOG00000035419	RAB5B	100	83.256	ENSCAFG00020026094	RAB5B	100	83.256	Canis_lupus_dingo
ENSSBOG00000035419	RAB5B	96	82.692	ENSCHIG00000010333	RAB5B	96	82.692	Capra_hircus
ENSSBOG00000035419	RAB5B	100	83.256	ENSTSYG00000009576	RAB5B	100	83.256	Carlito_syrichta
ENSSBOG00000035419	RAB5B	100	83.256	ENSCPOG00000034818	RAB5B	100	83.256	Cavia_porcellus
ENSSBOG00000035419	RAB5B	100	83.256	ENSCCAG00000019480	RAB5B	100	83.256	Cebus_capucinus
ENSSBOG00000035419	RAB5B	94	94.413	ENSCATG00000034978	RAB5B	98	94.413	Cercocebus_atys
ENSSBOG00000035419	RAB5B	100	83.256	ENSCSAG00000005277	RAB5B	100	83.256	Chlorocebus_sabaeus
ENSSBOG00000035419	RAB5B	100	81.395	ENSCPBG00000012712	RAB5B	100	81.395	Chrysemys_picta_bellii
ENSSBOG00000035419	RAB5B	100	83.256	ENSCGRG00001000428	Rab5b	100	83.256	Cricetulus_griseus_chok1gshd
ENSSBOG00000035419	RAB5B	100	83.256	ENSCGRG00000009508	-	100	83.256	Cricetulus_griseus_crigri
ENSSBOG00000035419	RAB5B	100	83.256	ENSDORG00000025063	Rab5b	100	83.256	Dipodomys_ordii
ENSSBOG00000035419	RAB5B	100	83.256	ENSECAG00000023306	RAB5B	100	83.256	Equus_caballus
ENSSBOG00000035419	RAB5B	100	83.256	ENSEEUG00000006745	RAB5B	100	83.256	Erinaceus_europaeus
ENSSBOG00000035419	RAB5B	100	83.256	ENSFDAG00000008326	RAB5B	100	83.256	Fukomys_damarensis
ENSSBOG00000035419	RAB5B	100	82.791	ENSHGLG00000005995	RAB5B	100	82.791	Heterocephalus_glaber_female
ENSSBOG00000035419	RAB5B	100	82.791	ENSHGLG00100012955	RAB5B	100	82.791	Heterocephalus_glaber_male
ENSSBOG00000035419	RAB5B	100	82.791	ENSSTOG00000010536	RAB5B	100	82.791	Ictidomys_tridecemlineatus
ENSSBOG00000035419	RAB5B	100	83.256	ENSJJAG00000019506	Rab5b	100	83.256	Jaculus_jaculus
ENSSBOG00000035419	RAB5B	100	82.488	ENSLAFG00000018009	RAB5B	95	82.488	Loxodonta_africana
ENSSBOG00000035419	RAB5B	100	83.256	ENSMFAG00000029992	RAB5B	100	83.256	Macaca_fascicularis
ENSSBOG00000035419	RAB5B	100	83.256	ENSMMUG00000031853	RAB5B	100	83.256	Macaca_mulatta
ENSSBOG00000035419	RAB5B	100	83.256	ENSMNEG00000005338	RAB5B	100	83.256	Macaca_nemestrina
ENSSBOG00000035419	RAB5B	100	83.256	ENSMLEG00000034462	RAB5B	100	83.256	Mandrillus_leucophaeus
ENSSBOG00000035419	RAB5B	100	83.256	ENSMAUG00000011613	Rab5b	100	83.256	Mesocricetus_auratus
ENSSBOG00000035419	RAB5B	100	83.256	ENSMICG00000011086	RAB5B	100	83.256	Microcebus_murinus
ENSSBOG00000035419	RAB5B	100	83.256	ENSMUSG00000000711	Rab5b	100	83.256	Mus_musculus
ENSSBOG00000035419	RAB5B	100	83.256	MGP_PahariEiJ_G0031135	Rab5b	100	83.256	Mus_pahari
ENSSBOG00000035419	RAB5B	100	82.791	MGP_SPRETEiJ_G0016774	Rab5b	100	82.791	Mus_spretus
ENSSBOG00000035419	RAB5B	99	82.407	ENSMPUG00000000946	RAB5B	89	82.407	Mustela_putorius_furo
ENSSBOG00000035419	RAB5B	100	83.256	ENSNLEG00000017570	-	100	83.256	Nomascus_leucogenys
ENSSBOG00000035419	RAB5B	100	83.256	ENSOPRG00000007883	RAB5B	100	83.256	Ochotona_princeps
ENSSBOG00000035419	RAB5B	100	82.791	ENSODEG00000003860	RAB5B	100	82.791	Octodon_degus
ENSSBOG00000035419	RAB5B	100	83.256	ENSOCUG00000013895	RAB5B	95	83.256	Oryctolagus_cuniculus
ENSSBOG00000035419	RAB5B	100	83.256	ENSOARG00000010651	RAB5B	95	83.256	Ovis_aries
ENSSBOG00000035419	RAB5B	100	83.256	ENSPPAG00000035431	RAB5B	100	83.256	Pan_paniscus
ENSSBOG00000035419	RAB5B	100	83.256	ENSPTRG00000005071	RAB5B	97	82.297	Pan_troglodytes
ENSSBOG00000035419	RAB5B	99	82.629	ENSPANG00000021075	RAB5B	96	82.629	Papio_anubis
ENSSBOG00000035419	RAB5B	100	83.256	ENSPCOG00000016461	RAB5B	100	83.256	Propithecus_coquereli
ENSSBOG00000035419	RAB5B	100	82.791	ENSRNOG00000006130	Rab5b	100	82.791	Rattus_norvegicus
ENSSBOG00000035419	RAB5B	100	83.256	ENSRBIG00000013165	RAB5B	100	83.256	Rhinopithecus_bieti
ENSSBOG00000035419	RAB5B	100	83.256	ENSRROG00000037973	RAB5B	100	83.256	Rhinopithecus_roxellana
ENSSBOG00000035419	RAB5B	100	82.791	ENSSHAG00000007727	RAB5B	100	82.791	Sarcophilus_harrisii
ENSSBOG00000035419	RAB5B	100	83.256	ENSSARG00000006237	RAB5B	100	83.256	Sorex_araneus
ENSSBOG00000035419	RAB5B	100	81.395	ENSSPUG00000014873	RAB5B	100	81.395	Sphenodon_punctatus
ENSSBOG00000035419	RAB5B	100	83.256	ENSTTRG00000015001	RAB5B	100	83.256	Tursiops_truncatus
ENSSBOG00000035419	RAB5B	100	83.256	ENSUAMG00000014651	RAB5B	100	83.256	Ursus_americanus
ENSSBOG00000035419	RAB5B	100	83.256	ENSUMAG00000016263	RAB5B	100	83.256	Ursus_maritimus
ENSSBOG00000035419	RAB5B	77	93.151	ENSVVUG00000022054	RAB5B	81	93.151	Vulpes_vulpes