EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000035513 (Gene tree)
Gene ID: 101038331
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 12979 bases
Position: chrJH378315.1:1088080-1101058
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000038914	ResIII	PF04851.15	1.2e-07	1	1
ENSSBOP00000038921	ResIII	PF04851.15	1.6e-07	1	1
ENSSBOP00000038914	DEAD	PF00270.29	6.2e-39	1	1
ENSSBOP00000038921	DEAD	PF00270.29	7.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000055880	-	1155	XM_010332289	ENSSBOP00000038921	384 (aa)	XP_010330591	A0A2K6V428
ENSSBOT00000055873	-	3331	-	ENSSBOP00000038914	319 (aa)	-	A0A2K6V426

Gene Model

Click here to download ENSSBOG00000035513's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG
sbq03015	mRNA surveillance pathway	KEGG
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000035513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000035513	-	85	33.604	ENSSBOG00000024694	EIF4A3	88	33.791
ENSSBOG00000035513	-	58	32.812	ENSSBOG00000035521	DDX24	50	32.812
ENSSBOG00000035513	-	91	32.570	ENSSBOG00000023267	EIF4A1	95	32.570
ENSSBOG00000035513	-	79	33.333	ENSSBOG00000035866	DDX47	75	32.635
ENSSBOG00000035513	-	100	79.907	ENSSBOG00000034939	DDX39A	100	80.374
ENSSBOG00000035513	-	85	34.417	ENSSBOG00000020018	-	94	30.640
ENSSBOG00000035513	-	83	32.453	ENSSBOG00000028754	-	91	31.034
ENSSBOG00000035513	-	99	30.445	ENSSBOG00000029671	DDX6	88	30.445
ENSSBOG00000035513	-	79	30.581	ENSSBOG00000020778	-	89	30.581
ENSSBOG00000035513	-	86	30.343	ENSSBOG00000035812	DDX49	83	30.343
ENSSBOG00000035513	-	63	35.000	ENSSBOG00000027332	-	82	33.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000035513	-	100	89.720	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSSBOG00000035513	-	100	89.486	ENSAMEG00000009508	DDX39B	99	89.486	Ailuropoda_melanoleuca
ENSSBOG00000035513	-	99	83.607	ENSACIG00000004534	ddx39b	98	83.607	Amphilophus_citrinellus
ENSSBOG00000035513	-	100	82.870	ENSATEG00000012366	ddx39b	100	82.870	Anabas_testudineus
ENSSBOG00000035513	-	100	86.946	ENSACAG00000012240	DDX39B	100	86.946	Anolis_carolinensis
ENSSBOG00000035513	-	100	89.720	ENSANAG00000030372	DDX39B	100	89.720	Aotus_nancymaae
ENSSBOG00000035513	-	99	80.876	ENSACLG00000018759	ddx39b	99	80.876	Astatotilapia_calliptera
ENSSBOG00000035513	-	100	82.339	ENSAMXG00000017837	ddx39b	100	82.339	Astyanax_mexicanus
ENSSBOG00000035513	-	100	89.486	ENSBTAG00000014490	DDX39B	100	89.486	Bos_taurus
ENSSBOG00000035513	-	100	89.720	ENSCJAG00000003152	DDX39B	100	89.720	Callithrix_jacchus
ENSSBOG00000035513	-	100	89.252	ENSCAFG00000000509	DDX39B	100	89.252	Canis_familiaris
ENSSBOG00000035513	-	100	89.252	ENSCAFG00020020530	DDX39B	100	89.252	Canis_lupus_dingo
ENSSBOG00000035513	-	100	89.486	ENSCHIG00000004579	DDX39B	100	89.486	Capra_hircus
ENSSBOG00000035513	-	100	85.075	ENSTSYG00000029741	-	91	88.095	Carlito_syrichta
ENSSBOG00000035513	-	100	89.720	ENSTSYG00000010226	-	100	89.720	Carlito_syrichta
ENSSBOG00000035513	-	100	89.486	ENSCAPG00000010066	DDX39B	100	89.486	Cavia_aperea
ENSSBOG00000035513	-	100	89.486	ENSCPOG00000002335	DDX39B	100	89.486	Cavia_porcellus
ENSSBOG00000035513	-	100	89.720	ENSCCAG00000027897	DDX39B	100	89.720	Cebus_capucinus
ENSSBOG00000035513	-	99	81.647	ENSCATG00000043709	DDX39B	99	81.647	Cercocebus_atys
ENSSBOG00000035513	-	100	89.486	ENSCLAG00000014555	DDX39B	100	89.486	Chinchilla_lanigera
ENSSBOG00000035513	-	99	89.412	ENSCSAG00000008517	DDX39B	100	89.412	Chlorocebus_sabaeus
ENSSBOG00000035513	-	60	83.883	ENSCPBG00000014671	-	100	83.883	Chrysemys_picta_bellii
ENSSBOG00000035513	-	97	94.805	ENSCANG00000041217	DDX39B	100	89.720	Colobus_angolensis_palliatus
ENSSBOG00000035513	-	83	98.868	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSSBOG00000035513	-	82	78.994	ENSCGRG00001021916	-	89	78.994	Cricetulus_griseus_chok1gshd
ENSSBOG00000035513	-	96	95.752	ENSCGRG00000012479	-	95	95.752	Cricetulus_griseus_crigri
ENSSBOG00000035513	-	64	98.537	ENSCGRG00000000078	-	90	98.537	Cricetulus_griseus_crigri
ENSSBOG00000035513	-	100	82.069	ENSDARG00000036069	ddx39b	100	82.299	Danio_rerio
ENSSBOG00000035513	-	100	89.720	ENSDNOG00000010215	DDX39B	100	89.720	Dasypus_novemcinctus
ENSSBOG00000035513	-	77	99.592	ENSDORG00000004985	Ddx39b	100	87.968	Dipodomys_ordii
ENSSBOG00000035513	-	77	97.959	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSSBOG00000035513	-	100	89.720	ENSEASG00005017156	DDX39B	100	89.720	Equus_asinus_asinus
ENSSBOG00000035513	-	100	89.720	ENSECAG00000007750	DDX39B	100	89.720	Equus_caballus
ENSSBOG00000035513	-	100	82.135	ENSELUG00000017904	ddx39b	100	82.135	Esox_lucius
ENSSBOG00000035513	-	100	89.486	ENSFCAG00000004497	DDX39B	100	89.486	Felis_catus
ENSSBOG00000035513	-	100	89.486	ENSFDAG00000011074	DDX39B	100	89.486	Fukomys_damarensis
ENSSBOG00000035513	-	71	85.759	ENSGAGG00000001300	-	80	85.759	Gopherus_agassizii
ENSSBOG00000035513	-	97	94.481	ENSGGOG00000005989	DDX39B	100	89.720	Gorilla_gorilla
ENSSBOG00000035513	-	64	88.038	ENSHBUG00000022054	-	77	88.038	Haplochromis_burtoni
ENSSBOG00000035513	-	100	89.019	ENSHGLG00000019248	DDX39B	100	89.019	Heterocephalus_glaber_female
ENSSBOG00000035513	-	100	89.019	ENSHGLG00100011850	DDX39B	100	89.019	Heterocephalus_glaber_male
ENSSBOG00000035513	-	100	90.306	ENSIPUG00000015733	DDX39B	94	90.816	Ictalurus_punctatus
ENSSBOG00000035513	-	100	89.252	ENSSTOG00000012838	DDX39B	100	89.252	Ictidomys_tridecemlineatus
ENSSBOG00000035513	-	100	89.019	ENSJJAG00000005660	-	100	89.019	Jaculus_jaculus
ENSSBOG00000035513	-	99	69.905	ENSLBEG00000012254	ddx39b	99	69.789	Labrus_bergylta
ENSSBOG00000035513	-	78	75.403	ENSLBEG00000017177	-	99	69.258	Labrus_bergylta
ENSSBOG00000035513	-	100	79.724	ENSLACG00000002110	DDX39B	100	79.724	Latimeria_chalumnae
ENSSBOG00000035513	-	100	89.930	ENSLAFG00000014202	DDX39B	100	96.183	Loxodonta_africana
ENSSBOG00000035513	-	97	94.805	ENSMFAG00000034233	DDX39B	100	89.720	Macaca_fascicularis
ENSSBOG00000035513	-	97	94.805	ENSMMUG00000008839	DDX39B	100	89.720	Macaca_mulatta
ENSSBOG00000035513	-	97	94.805	ENSMNEG00000041059	DDX39B	100	89.720	Macaca_nemestrina
ENSSBOG00000035513	-	97	94.805	ENSMLEG00000043791	DDX39B	100	89.720	Mandrillus_leucophaeus
ENSSBOG00000035513	-	99	80.876	ENSMZEG00005017654	ddx39b	99	80.876	Maylandia_zebra
ENSSBOG00000035513	-	100	89.019	ENSMAUG00000008059	Ddx39b	100	89.019	Mesocricetus_auratus
ENSSBOG00000035513	-	100	89.720	ENSMICG00000017349	DDX39B	100	89.720	Microcebus_murinus
ENSSBOG00000035513	-	100	89.252	ENSMOCG00000011169	Ddx39b	100	89.252	Microtus_ochrogaster
ENSSBOG00000035513	-	77	100.000	ENSMODG00000015791	DDX39B	88	88.032	Monodelphis_domestica
ENSSBOG00000035513	-	56	97.765	MGP_CAROLIEiJ_G0021519	-	97	97.765	Mus_caroli
ENSSBOG00000035513	-	100	89.252	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSSBOG00000035513	-	100	89.252	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSSBOG00000035513	-	96	96.732	MGP_SPRETEiJ_G0022424	Ddx39b	94	96.732	Mus_spretus
ENSSBOG00000035513	-	100	89.486	ENSMPUG00000011407	DDX39B	100	89.486	Mustela_putorius_furo
ENSSBOG00000035513	-	70	85.852	ENSMLUG00000001681	DDX39B	100	85.852	Myotis_lucifugus
ENSSBOG00000035513	-	100	89.720	ENSNGAG00000022948	Ddx39b	100	89.720	Nannospalax_galili
ENSSBOG00000035513	-	100	65.187	ENSNLEG00000006094	DDX39B	100	65.187	Nomascus_leucogenys
ENSSBOG00000035513	-	84	98.611	ENSMEUG00000008264	DDX39B	86	98.611	Notamacropus_eugenii
ENSSBOG00000035513	-	100	89.486	ENSOPRG00000011923	DDX39B	100	89.486	Ochotona_princeps
ENSSBOG00000035513	-	100	89.252	ENSODEG00000018083	DDX39B	100	89.252	Octodon_degus
ENSSBOG00000035513	-	100	82.176	ENSONIG00000004740	ddx39b	100	82.176	Oreochromis_niloticus
ENSSBOG00000035513	-	74	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSSBOG00000035513	-	100	86.230	ENSOCUG00000024126	DDX39B	100	86.230	Oryctolagus_cuniculus
ENSSBOG00000035513	-	100	88.345	ENSOGAG00000028850	-	100	88.345	Otolemur_garnettii
ENSSBOG00000035513	-	82	79.947	ENSOGAG00000009067	-	100	84.877	Otolemur_garnettii
ENSSBOG00000035513	-	100	89.486	ENSOARG00000008787	DDX39B	98	89.486	Ovis_aries
ENSSBOG00000035513	-	100	89.720	ENSPPAG00000043072	DDX39B	100	89.720	Pan_paniscus
ENSSBOG00000035513	-	100	89.486	ENSPPRG00000001913	DDX39B	100	89.486	Panthera_pardus
ENSSBOG00000035513	-	100	88.551	ENSPTIG00000017669	DDX39B	100	88.551	Panthera_tigris_altaica
ENSSBOG00000035513	-	100	89.720	ENSPTRG00000032509	DDX39B	100	89.720	Pan_troglodytes
ENSSBOG00000035513	-	97	94.805	ENSPANG00000018609	DDX39B	100	89.720	Papio_anubis
ENSSBOG00000035513	-	100	80.778	ENSPKIG00000011324	ddx39b	100	81.465	Paramormyrops_kingsleyae
ENSSBOG00000035513	-	100	89.019	ENSPEMG00000016905	Ddx39b	100	89.019	Peromyscus_maniculatus_bairdii
ENSSBOG00000035513	-	100	89.720	ENSPCIG00000017572	DDX39B	100	89.720	Phascolarctos_cinereus
ENSSBOG00000035513	-	100	89.720	ENSPPYG00000016433	DDX39B	100	89.720	Pongo_abelii
ENSSBOG00000035513	-	63	84.155	ENSPCAG00000003484	DDX39B	100	84.155	Procavia_capensis
ENSSBOG00000035513	-	100	89.720	ENSPCOG00000018656	DDX39B	100	89.720	Propithecus_coquereli
ENSSBOG00000035513	-	100	89.252	ENSPVAG00000004653	DDX39B	100	89.252	Pteropus_vampyrus
ENSSBOG00000035513	-	98	72.642	ENSPNYG00000010382	ddx39b	98	72.834	Pundamilia_nyererei
ENSSBOG00000035513	-	100	82.110	ENSPNAG00000026926	ddx39b	100	82.110	Pygocentrus_nattereri
ENSSBOG00000035513	-	100	89.252	ENSRNOG00000000841	Ddx39b	100	89.252	Rattus_norvegicus
ENSSBOG00000035513	-	100	100.000	ENSRBIG00000031309	DDX39B	100	100.000	Rhinopithecus_bieti
ENSSBOG00000035513	-	97	94.805	ENSRROG00000039517	DDX39B	100	89.720	Rhinopithecus_roxellana
ENSSBOG00000035513	-	100	89.720	ENSSHAG00000003209	DDX39B	100	89.720	Sarcophilus_harrisii
ENSSBOG00000035513	-	100	81.007	ENSSFOG00015016107	ddx39b	100	81.693	Scleropages_formosus
ENSSBOG00000035513	-	100	83.333	ENSSDUG00000011557	ddx39b	100	83.565	Seriola_dumerili
ENSSBOG00000035513	-	100	82.870	ENSSLDG00000015763	ddx39b	100	83.102	Seriola_lalandi_dorsalis
ENSSBOG00000035513	-	77	99.184	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSSBOG00000035513	-	100	87.617	ENSSPUG00000012805	DDX39B	100	87.617	Sphenodon_punctatus
ENSSBOG00000035513	-	100	89.720	ENSSSCG00000001400	DDX39B	100	87.283	Sus_scrofa
ENSSBOG00000035513	-	90	100.000	ENSTBEG00000003721	DDX39B	81	100.000	Tupaia_belangeri
ENSSBOG00000035513	-	100	81.293	ENSTTRG00000014074	DDX39B	100	81.293	Tursiops_truncatus
ENSSBOG00000035513	-	100	86.232	ENSUAMG00000027335	DDX39B	100	86.232	Ursus_americanus
ENSSBOG00000035513	-	100	85.545	ENSUMAG00000015124	DDX39B	100	85.545	Ursus_maritimus
ENSSBOG00000035513	-	57	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSSBOG00000035513	-	95	95.364	ENSVVUG00000019518	DDX39B	99	89.252	Vulpes_vulpes
ENSSBOG00000035513	-	100	73.953	ENSXETG00000002498	ddx39b	99	73.953	Xenopus_tropicalis