EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000035778 (Gene tree)
Gene ID: 101053637
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 46427 bases
Position: chrJH378141.1:8363858-8410284
Accession: 23505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000039510	AARP2CN	PF08142.12	9.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000056471	BMS1-201	7391	XM_010340637	ENSSBOP00000039510	1284 (aa)	XP_010338939	A0A2K6V5U0
ENSSBOT00000056479	BMS1-202	4259	-	ENSSBOP00000039518	428 (aa)	-	A0A2K6V5U2

Gene Model

Click here to download ENSSBOG00000035778's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000035778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000035778	BMS1	100	95.253	ENSG00000165733	BMS1	100	95.175	Homo_sapiens
ENSSBOG00000035778	BMS1	71	71.626	ENSAPOG00000002296	bms1	99	68.850	Acanthochromis_polyacanthus
ENSSBOG00000035778	BMS1	99	89.519	ENSAMEG00000016834	BMS1	99	89.441	Ailuropoda_melanoleuca
ENSSBOG00000035778	BMS1	87	69.044	ENSACIG00000002588	bms1	94	69.368	Amphilophus_citrinellus
ENSSBOG00000035778	BMS1	84	70.402	ENSAOCG00000018088	bms1	51	68.730	Amphiprion_ocellaris
ENSSBOG00000035778	BMS1	81	72.540	ENSAPEG00000014673	bms1	51	67.955	Amphiprion_percula
ENSSBOG00000035778	BMS1	88	68.971	ENSATEG00000023465	bms1	52	68.153	Anabas_testudineus
ENSSBOG00000035778	BMS1	95	72.574	ENSAPLG00000003759	BMS1	100	72.419	Anas_platyrhynchos
ENSSBOG00000035778	BMS1	99	70.231	ENSACAG00000004537	-	99	69.924	Anolis_carolinensis
ENSSBOG00000035778	BMS1	100	97.274	ENSANAG00000023432	BMS1	100	97.274	Aotus_nancymaae
ENSSBOG00000035778	BMS1	88	68.262	ENSACLG00000001294	bms1	99	61.544	Astatotilapia_calliptera
ENSSBOG00000035778	BMS1	82	72.706	ENSAMXG00000011236	bms1	50	66.827	Astyanax_mexicanus
ENSSBOG00000035778	BMS1	100	88.889	ENSBTAG00000012878	BMS1	100	88.733	Bos_taurus
ENSSBOG00000035778	BMS1	81	52.555	WBGene00022021	Y61A9LA.10	97	52.000	Caenorhabditis_elegans
ENSSBOG00000035778	BMS1	100	97.664	ENSCJAG00000021705	BMS1	100	97.664	Callithrix_jacchus
ENSSBOG00000035778	BMS1	99	89.953	ENSCAFG00000007114	BMS1	99	89.330	Canis_familiaris
ENSSBOG00000035778	BMS1	99	89.953	ENSCAFG00020025282	BMS1	99	89.330	Canis_lupus_dingo
ENSSBOG00000035778	BMS1	100	88.578	ENSCHIG00000023251	BMS1	100	88.423	Capra_hircus
ENSSBOG00000035778	BMS1	99	82.592	ENSCAPG00000008652	BMS1	99	82.358	Cavia_aperea
ENSSBOG00000035778	BMS1	99	86.729	ENSCPOG00000000502	BMS1	99	85.792	Cavia_porcellus
ENSSBOG00000035778	BMS1	100	81.634	ENSCCAG00000024969	-	100	81.556	Cebus_capucinus
ENSSBOG00000035778	BMS1	100	95.564	ENSCATG00000030625	-	100	95.564	Cercocebus_atys
ENSSBOG00000035778	BMS1	90	71.899	ENSCATG00000008695	-	97	72.024	Cercocebus_atys
ENSSBOG00000035778	BMS1	99	86.807	ENSCLAG00000002446	BMS1	99	86.105	Chinchilla_lanigera
ENSSBOG00000035778	BMS1	100	95.798	ENSCSAG00000011118	BMS1	100	95.798	Chlorocebus_sabaeus
ENSSBOG00000035778	BMS1	100	87.122	ENSCHOG00000011055	BMS1	100	87.122	Choloepus_hoffmanni
ENSSBOG00000035778	BMS1	99	74.162	ENSCPBG00000025581	BMS1	99	73.543	Chrysemys_picta_bellii
ENSSBOG00000035778	BMS1	78	58.596	ENSCING00000003181	-	97	58.596	Ciona_intestinalis
ENSSBOG00000035778	BMS1	67	55.529	ENSCSAVG00000004113	-	88	55.012	Ciona_savignyi
ENSSBOG00000035778	BMS1	100	95.642	ENSCANG00000011609	BMS1	100	95.097	Colobus_angolensis_palliatus
ENSSBOG00000035778	BMS1	99	87.549	ENSCGRG00001019461	Bms1	99	86.848	Cricetulus_griseus_chok1gshd
ENSSBOG00000035778	BMS1	99	87.549	ENSCGRG00000009016	Bms1	99	86.848	Cricetulus_griseus_crigri
ENSSBOG00000035778	BMS1	85	68.429	ENSCVAG00000008371	bms1	52	69.181	Cyprinodon_variegatus
ENSSBOG00000035778	BMS1	100	89.396	ENSDNOG00000015761	BMS1	100	89.009	Dasypus_novemcinctus
ENSSBOG00000035778	BMS1	99	88.240	ENSDORG00000002982	Bms1	99	88.006	Dipodomys_ordii
ENSSBOG00000035778	BMS1	75	60.267	FBgn0036686	CG7728	90	58.435	Drosophila_melanogaster
ENSSBOG00000035778	BMS1	85	84.821	ENSETEG00000009554	BMS1	91	84.821	Echinops_telfairi
ENSSBOG00000035778	BMS1	99	89.805	ENSEASG00005006894	BMS1	99	90.117	Equus_asinus_asinus
ENSSBOG00000035778	BMS1	99	90.584	ENSECAG00000001358	BMS1	99	90.117	Equus_caballus
ENSSBOG00000035778	BMS1	88	67.737	ENSELUG00000001756	bms1	96	69.424	Esox_lucius
ENSSBOG00000035778	BMS1	99	90.016	ENSFCAG00000011220	BMS1	99	89.782	Felis_catus
ENSSBOG00000035778	BMS1	99	70.348	ENSFALG00000006882	BMS1	99	71.189	Ficedula_albicollis
ENSSBOG00000035778	BMS1	99	85.480	ENSFDAG00000001422	BMS1	99	84.375	Fukomys_damarensis
ENSSBOG00000035778	BMS1	85	69.008	ENSFHEG00000003367	bms1	99	66.822	Fundulus_heteroclitus
ENSSBOG00000035778	BMS1	87	65.538	ENSGMOG00000000718	bms1	87	73.775	Gadus_morhua
ENSSBOG00000035778	BMS1	99	71.560	ENSGALG00000002624	BMS1	99	72.308	Gallus_gallus
ENSSBOG00000035778	BMS1	99	60.092	ENSGACG00000015334	bms1	91	66.129	Gasterosteus_aculeatus
ENSSBOG00000035778	BMS1	99	74.103	ENSGAGG00000003467	BMS1	99	73.561	Gopherus_agassizii
ENSSBOG00000035778	BMS1	88	68.262	ENSHBUG00000022628	bms1	97	68.740	Haplochromis_burtoni
ENSSBOG00000035778	BMS1	99	86.126	ENSHGLG00000000477	BMS1	99	84.867	Heterocephalus_glaber_female
ENSSBOG00000035778	BMS1	99	86.282	ENSHGLG00100002176	BMS1	99	84.945	Heterocephalus_glaber_male
ENSSBOG00000035778	BMS1	89	67.752	ENSHCOG00000017604	bms1	96	67.524	Hippocampus_comes
ENSSBOG00000035778	BMS1	55	62.989	ENSIPUG00000017855	bms1	99	60.837	Ictalurus_punctatus
ENSSBOG00000035778	BMS1	99	89.531	ENSSTOG00000015063	BMS1	99	89.062	Ictidomys_tridecemlineatus
ENSSBOG00000035778	BMS1	99	86.875	ENSJJAG00000017328	Bms1	99	85.503	Jaculus_jaculus
ENSSBOG00000035778	BMS1	58	63.055	ENSKMAG00000021982	bms1	96	61.093	Kryptolebias_marmoratus
ENSSBOG00000035778	BMS1	81	70.387	ENSLBEG00000028208	bms1	88	70.548	Labrus_bergylta
ENSSBOG00000035778	BMS1	99	61.603	ENSLACG00000001600	BMS1	100	62.183	Latimeria_chalumnae
ENSSBOG00000035778	BMS1	82	74.718	ENSLOCG00000012914	bms1	99	63.207	Lepisosteus_oculatus
ENSSBOG00000035778	BMS1	99	87.928	ENSLAFG00000006250	BMS1	99	88.006	Loxodonta_africana
ENSSBOG00000035778	BMS1	84	94.505	ENSMFAG00000037771	BMS1	100	94.505	Macaca_fascicularis
ENSSBOG00000035778	BMS1	90	80.739	ENSMMUG00000007426	-	99	80.567	Macaca_mulatta
ENSSBOG00000035778	BMS1	85	76.654	ENSMLEG00000029084	-	97	76.562	Mandrillus_leucophaeus
ENSSBOG00000035778	BMS1	99	59.891	ENSMAMG00000020855	bms1	88	70.776	Mastacembelus_armatus
ENSSBOG00000035778	BMS1	88	68.262	ENSMZEG00005005663	bms1	99	61.467	Maylandia_zebra
ENSSBOG00000035778	BMS1	95	70.424	ENSMGAG00000001170	BMS1	99	71.256	Meleagris_gallopavo
ENSSBOG00000035778	BMS1	99	86.703	ENSMAUG00000002195	Bms1	99	86.392	Mesocricetus_auratus
ENSSBOG00000035778	BMS1	100	89.674	ENSMICG00000009977	BMS1	100	89.519	Microcebus_murinus
ENSSBOG00000035778	BMS1	99	86.048	ENSMOCG00000002038	Bms1	99	85.659	Microtus_ochrogaster
ENSSBOG00000035778	BMS1	85	67.805	ENSMMOG00000000977	bms1	88	73.210	Mola_mola
ENSSBOG00000035778	BMS1	99	78.111	ENSMODG00000001177	BMS1	99	78.818	Monodelphis_domestica
ENSSBOG00000035778	BMS1	96	64.130	ENSMALG00000009680	bms1	51	67.363	Monopterus_albus
ENSSBOG00000035778	BMS1	71	94.903	MGP_CAROLIEiJ_G0028785	-	86	94.903	Mus_caroli
ENSSBOG00000035778	BMS1	99	85.770	ENSMUSG00000030138	Bms1	99	85.381	Mus_musculus
ENSSBOG00000035778	BMS1	99	86.215	MGP_PahariEiJ_G0022539	Bms1	99	85.681	Mus_pahari
ENSSBOG00000035778	BMS1	99	86.081	MGP_SPRETEiJ_G0029816	Bms1	99	84.914	Mus_spretus
ENSSBOG00000035778	BMS1	99	90.335	ENSMPUG00000017276	BMS1	99	89.556	Mustela_putorius_furo
ENSSBOG00000035778	BMS1	100	88.656	ENSMLUG00000003260	BMS1	100	87.956	Myotis_lucifugus
ENSSBOG00000035778	BMS1	100	93.619	ENSNLEG00000015791	BMS1	100	93.930	Nomascus_leucogenys
ENSSBOG00000035778	BMS1	80	94.524	ENSOPRG00000005195	BMS1	81	94.524	Ochotona_princeps
ENSSBOG00000035778	BMS1	99	86.037	ENSODEG00000005554	BMS1	99	85.803	Octodon_degus
ENSSBOG00000035778	BMS1	90	68.640	ENSONIG00000007227	bms1	52	68.800	Oreochromis_niloticus
ENSSBOG00000035778	BMS1	99	76.804	ENSOANG00000000662	-	99	76.416	Ornithorhynchus_anatinus
ENSSBOG00000035778	BMS1	99	88.438	ENSOCUG00000005354	BMS1	99	88.438	Oryctolagus_cuniculus
ENSSBOG00000035778	BMS1	87	69.481	ENSORLG00000014655	bms1	95	69.243	Oryzias_latipes
ENSSBOG00000035778	BMS1	87	69.494	ENSORLG00020016246	bms1	92	69.268	Oryzias_latipes_hni
ENSSBOG00000035778	BMS1	87	69.168	ENSORLG00015014183	bms1	88	66.473	Oryzias_latipes_hsok
ENSSBOG00000035778	BMS1	87	70.130	ENSOMEG00000015042	bms1	95	69.726	Oryzias_melastigma
ENSSBOG00000035778	BMS1	99	90.147	ENSOGAG00000006511	BMS1	99	90.225	Otolemur_garnettii
ENSSBOG00000035778	BMS1	100	88.459	ENSOARG00000003900	BMS1	100	88.304	Ovis_aries
ENSSBOG00000035778	BMS1	100	91.835	ENSPPAG00000027837	BMS1	100	92.068	Pan_paniscus
ENSSBOG00000035778	BMS1	99	90.094	ENSPPRG00000001311	BMS1	99	89.860	Panthera_pardus
ENSSBOG00000035778	BMS1	99	88.056	ENSPTIG00000009652	BMS1	99	88.134	Panthera_tigris_altaica
ENSSBOG00000035778	BMS1	100	95.409	ENSPTRG00000002441	BMS1	100	95.331	Pan_troglodytes
ENSSBOG00000035778	BMS1	99	71.726	ENSPSIG00000006481	BMS1	99	72.201	Pelodiscus_sinensis
ENSSBOG00000035778	BMS1	99	78.783	ENSPEMG00000022467	Bms1	99	79.657	Peromyscus_maniculatus_bairdii
ENSSBOG00000035778	BMS1	95	93.960	ENSPCIG00000001339	BMS1	98	87.324	Phascolarctos_cinereus
ENSSBOG00000035778	BMS1	86	66.035	ENSPFOG00000015180	bms1	95	67.311	Poecilia_formosa
ENSSBOG00000035778	BMS1	85	67.476	ENSPMEG00000023176	bms1	90	67.311	Poecilia_mexicana
ENSSBOG00000035778	BMS1	85	67.367	ENSPREG00000002695	bms1	95	67.203	Poecilia_reticulata
ENSSBOG00000035778	BMS1	61	93.838	ENSPPYG00000002836	-	99	93.838	Pongo_abelii
ENSSBOG00000035778	BMS1	73	94.558	ENSPCAG00000014528	BMS1	73	94.558	Procavia_capensis
ENSSBOG00000035778	BMS1	95	85.911	ENSPCOG00000023834	-	99	86.559	Propithecus_coquereli
ENSSBOG00000035778	BMS1	100	87.626	ENSPVAG00000000725	BMS1	100	87.004	Pteropus_vampyrus
ENSSBOG00000035778	BMS1	87	69.156	ENSPNYG00000018866	bms1	90	65.209	Pundamilia_nyererei
ENSSBOG00000035778	BMS1	82	82.736	ENSRNOG00000006576	Bms1	100	83.096	Rattus_norvegicus
ENSSBOG00000035778	BMS1	100	93.152	ENSRROG00000040101	BMS1	100	93.152	Rhinopithecus_roxellana
ENSSBOG00000035778	BMS1	73	45.420	YPL217C	-	81	46.739	Saccharomyces_cerevisiae
ENSSBOG00000035778	BMS1	99	78.067	ENSSHAG00000005062	BMS1	99	78.681	Sarcophilus_harrisii
ENSSBOG00000035778	BMS1	81	72.831	ENSSMAG00000019966	bms1	51	67.788	Scophthalmus_maximus
ENSSBOG00000035778	BMS1	88	68.882	ENSSDUG00000016875	bms1	70	72.477	Seriola_dumerili
ENSSBOG00000035778	BMS1	70	76.872	ENSSARG00000014407	BMS1	100	76.536	Sorex_araneus
ENSSBOG00000035778	BMS1	99	72.308	ENSSPUG00000014454	BMS1	99	73.385	Sphenodon_punctatus
ENSSBOG00000035778	BMS1	99	88.941	ENSSSCG00000010198	BMS1	99	89.174	Sus_scrofa
ENSSBOG00000035778	BMS1	99	69.962	ENSTGUG00000006302	-	99	71.101	Taeniopygia_guttata
ENSSBOG00000035778	BMS1	90	64.139	ENSTRUG00000008028	bms1	89	70.208	Takifugu_rubripes
ENSSBOG00000035778	BMS1	99	59.568	ENSTNIG00000006216	bms1	83	69.932	Tetraodon_nigroviridis
ENSSBOG00000035778	BMS1	61	93.846	ENSTBEG00000001673	-	64	93.846	Tupaia_belangeri
ENSSBOG00000035778	BMS1	100	87.403	ENSTTRG00000007983	BMS1	100	86.470	Tursiops_truncatus
ENSSBOG00000035778	BMS1	99	90.179	ENSUAMG00000023996	BMS1	99	90.023	Ursus_americanus
ENSSBOG00000035778	BMS1	99	90.101	ENSUMAG00000016523	BMS1	99	89.945	Ursus_maritimus
ENSSBOG00000035778	BMS1	88	83.055	ENSVPAG00000007477	BMS1	94	94.681	Vicugna_pacos
ENSSBOG00000035778	BMS1	99	89.953	ENSVVUG00000021305	BMS1	99	89.330	Vulpes_vulpes
ENSSBOG00000035778	BMS1	98	65.224	ENSXETG00000008158	bms1	99	65.174	Xenopus_tropicalis
ENSSBOG00000035778	BMS1	85	66.116	ENSXCOG00000000506	bms1	95	75.369	Xiphophorus_couchianus
ENSSBOG00000035778	BMS1	85	66.721	ENSXMAG00000014236	bms1	98	66.882	Xiphophorus_maculatus