EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000036106 (Gene tree)
Gene ID: 101041722
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 6417 bases
Position: chrJH378125.1:18981982-18988398
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000040217	PseudoU_synth_2	PF00849.22	9.2e-20	1	1
ENSSBOP00000040219	PseudoU_synth_2	PF00849.22	4.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000057185	RPUSD3-202	1002	-	ENSSBOP00000040219	333 (aa)	-	A0A2K6V7V3
ENSSBOT00000057183	RPUSD3-201	1353	XM_003927089	ENSSBOP00000040217	348 (aa)	XP_003927138	A0A2K6V7U4

Gene Model

Click here to download ENSSBOG00000036106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000036106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000036106	RPUSD3	79	30.104	ENSSBOG00000030413	RPUSD4	73	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000036106	RPUSD3	100	88.604	ENSG00000156990	RPUSD3	100	88.604	Homo_sapiens
ENSSBOG00000036106	RPUSD3	100	78.409	ENSAMEG00000016227	RPUSD3	100	78.409	Ailuropoda_melanoleuca
ENSSBOG00000036106	RPUSD3	81	56.383	ENSACAG00000009836	RPUSD3	80	56.383	Anolis_carolinensis
ENSSBOG00000036106	RPUSD3	53	92.432	ENSANAG00000038118	-	89	92.432	Aotus_nancymaae
ENSSBOG00000036106	RPUSD3	58	92.611	ENSANAG00000019945	-	82	92.611	Aotus_nancymaae
ENSSBOG00000036106	RPUSD3	77	71.168	ENSANAG00000007127	-	98	71.168	Aotus_nancymaae
ENSSBOG00000036106	RPUSD3	98	79.070	ENSBTAG00000007968	RPUSD3	100	79.070	Bos_taurus
ENSSBOG00000036106	RPUSD3	100	77.557	ENSCAFG00000029733	RPUSD3	100	77.557	Canis_familiaris
ENSSBOG00000036106	RPUSD3	100	77.557	ENSCAFG00020008582	RPUSD3	100	77.557	Canis_lupus_dingo
ENSSBOG00000036106	RPUSD3	98	77.907	ENSCHIG00000026027	RPUSD3	100	77.907	Capra_hircus
ENSSBOG00000036106	RPUSD3	99	78.000	ENSTSYG00000009994	RPUSD3	100	78.000	Carlito_syrichta
ENSSBOG00000036106	RPUSD3	75	79.615	ENSCAPG00000017559	RPUSD3	98	79.615	Cavia_aperea
ENSSBOG00000036106	RPUSD3	75	79.310	ENSCPOG00000037956	RPUSD3	88	68.358	Cavia_porcellus
ENSSBOG00000036106	RPUSD3	100	95.402	ENSCCAG00000029530	RPUSD3	100	95.402	Cebus_capucinus
ENSSBOG00000036106	RPUSD3	100	88.604	ENSCATG00000036939	RPUSD3	100	88.604	Cercocebus_atys
ENSSBOG00000036106	RPUSD3	100	88.319	ENSCSAG00000010506	RPUSD3	100	88.319	Chlorocebus_sabaeus
ENSSBOG00000036106	RPUSD3	50	84.821	ENSCHOG00000010151	-	67	84.821	Choloepus_hoffmanni
ENSSBOG00000036106	RPUSD3	74	57.085	ENSCPBG00000008825	RPUSD3	95	56.589	Chrysemys_picta_bellii
ENSSBOG00000036106	RPUSD3	100	88.604	ENSCANG00000040711	RPUSD3	100	88.604	Colobus_angolensis_palliatus
ENSSBOG00000036106	RPUSD3	96	73.433	ENSCGRG00001004923	Rpusd3	92	73.433	Cricetulus_griseus_chok1gshd
ENSSBOG00000036106	RPUSD3	96	73.433	ENSCGRG00000018315	Rpusd3	97	73.433	Cricetulus_griseus_crigri
ENSSBOG00000036106	RPUSD3	94	78.354	ENSDNOG00000039160	RPUSD3	87	78.354	Dasypus_novemcinctus
ENSSBOG00000036106	RPUSD3	81	71.014	ENSDORG00000026827	Rpusd3	92	76.226	Dipodomys_ordii
ENSSBOG00000036106	RPUSD3	100	70.904	ENSETEG00000006538	RPUSD3	99	70.904	Echinops_telfairi
ENSSBOG00000036106	RPUSD3	59	39.806	ENSEBUG00000015605	RPUSD3	67	39.806	Eptatretus_burgeri
ENSSBOG00000036106	RPUSD3	99	79.656	ENSEASG00005014160	RPUSD3	97	79.656	Equus_asinus_asinus
ENSSBOG00000036106	RPUSD3	99	80.802	ENSECAG00000019988	RPUSD3	97	80.802	Equus_caballus
ENSSBOG00000036106	RPUSD3	96	56.637	ENSEEUG00000007353	RPUSD3	96	56.637	Erinaceus_europaeus
ENSSBOG00000036106	RPUSD3	100	79.261	ENSFCAG00000014199	RPUSD3	100	79.261	Felis_catus
ENSSBOG00000036106	RPUSD3	78	52.015	ENSFALG00000012968	RPUSD3	99	49.451	Ficedula_albicollis
ENSSBOG00000036106	RPUSD3	75	80.916	ENSFDAG00000008350	RPUSD3	81	80.916	Fukomys_damarensis
ENSSBOG00000036106	RPUSD3	97	47.531	ENSGAGG00000007493	RPUSD3	95	48.308	Gopherus_agassizii
ENSSBOG00000036106	RPUSD3	100	88.604	ENSGGOG00000013120	RPUSD3	100	88.604	Gorilla_gorilla
ENSSBOG00000036106	RPUSD3	94	65.416	ENSHGLG00000011722	RPUSD3	96	65.416	Heterocephalus_glaber_female
ENSSBOG00000036106	RPUSD3	94	65.416	ENSHGLG00100016038	RPUSD3	96	65.416	Heterocephalus_glaber_male
ENSSBOG00000036106	RPUSD3	99	76.068	ENSSTOG00000002125	RPUSD3	99	76.068	Ictidomys_tridecemlineatus
ENSSBOG00000036106	RPUSD3	95	73.112	ENSJJAG00000012679	Rpusd3	96	73.112	Jaculus_jaculus
ENSSBOG00000036106	RPUSD3	95	80.539	ENSLAFG00000017501	RPUSD3	97	80.539	Loxodonta_africana
ENSSBOG00000036106	RPUSD3	100	88.319	ENSMFAG00000032407	RPUSD3	100	88.319	Macaca_fascicularis
ENSSBOG00000036106	RPUSD3	100	88.095	ENSMMUG00000010628	RPUSD3	97	91.640	Macaca_mulatta
ENSSBOG00000036106	RPUSD3	100	88.034	ENSMNEG00000040308	RPUSD3	100	88.034	Macaca_nemestrina
ENSSBOG00000036106	RPUSD3	100	88.604	ENSMLEG00000033940	RPUSD3	100	88.604	Mandrillus_leucophaeus
ENSSBOG00000036106	RPUSD3	97	73.373	ENSMAUG00000015473	Rpusd3	98	73.373	Mesocricetus_auratus
ENSSBOG00000036106	RPUSD3	98	78.488	ENSMICG00000002315	RPUSD3	100	78.488	Microcebus_murinus
ENSSBOG00000036106	RPUSD3	97	71.554	ENSMOCG00000022613	Rpusd3	99	71.554	Microtus_ochrogaster
ENSSBOG00000036106	RPUSD3	99	55.114	ENSMODG00000005210	RPUSD3	76	62.414	Monodelphis_domestica
ENSSBOG00000036106	RPUSD3	97	71.810	MGP_CAROLIEiJ_G0028725	Rpusd3	98	71.810	Mus_caroli
ENSSBOG00000036106	RPUSD3	97	72.107	ENSMUSG00000051169	Rpusd3	98	72.107	Mus_musculus
ENSSBOG00000036106	RPUSD3	97	72.107	MGP_PahariEiJ_G0022476	Rpusd3	98	72.107	Mus_pahari
ENSSBOG00000036106	RPUSD3	97	71.810	MGP_SPRETEiJ_G0029753	Rpusd3	98	71.810	Mus_spretus
ENSSBOG00000036106	RPUSD3	99	75.931	ENSMPUG00000017132	RPUSD3	99	75.931	Mustela_putorius_furo
ENSSBOG00000036106	RPUSD3	97	80.758	ENSMLUG00000006135	RPUSD3	99	80.758	Myotis_lucifugus
ENSSBOG00000036106	RPUSD3	96	74.850	ENSNGAG00000023704	Rpusd3	97	74.850	Nannospalax_galili
ENSSBOG00000036106	RPUSD3	100	76.353	ENSNLEG00000004214	RPUSD3	95	92.537	Nomascus_leucogenys
ENSSBOG00000036106	RPUSD3	75	67.816	ENSMEUG00000013098	-	100	67.816	Notamacropus_eugenii
ENSSBOG00000036106	RPUSD3	95	63.444	ENSOPRG00000002300	RPUSD3	94	63.444	Ochotona_princeps
ENSSBOG00000036106	RPUSD3	75	78.544	ENSODEG00000018137	RPUSD3	90	78.544	Octodon_degus
ENSSBOG00000036106	RPUSD3	82	51.916	ENSOANG00000012081	-	100	51.916	Ornithorhynchus_anatinus
ENSSBOG00000036106	RPUSD3	97	67.714	ENSOCUG00000027885	RPUSD3	99	67.714	Oryctolagus_cuniculus
ENSSBOG00000036106	RPUSD3	90	81.210	ENSOGAG00000012592	RPUSD3	100	81.210	Otolemur_garnettii
ENSSBOG00000036106	RPUSD3	99	78.917	ENSOARG00000005928	RPUSD3	99	78.917	Ovis_aries
ENSSBOG00000036106	RPUSD3	100	88.034	ENSPPAG00000038083	RPUSD3	100	88.034	Pan_paniscus
ENSSBOG00000036106	RPUSD3	100	79.545	ENSPPRG00000024433	RPUSD3	100	79.545	Panthera_pardus
ENSSBOG00000036106	RPUSD3	100	79.822	ENSPTIG00000006828	RPUSD3	100	79.822	Panthera_tigris_altaica
ENSSBOG00000036106	RPUSD3	100	88.319	ENSPTRG00000051760	RPUSD3	100	88.319	Pan_troglodytes
ENSSBOG00000036106	RPUSD3	100	88.604	ENSPANG00000023885	RPUSD3	100	88.604	Papio_anubis
ENSSBOG00000036106	RPUSD3	98	72.674	ENSPEMG00000017245	Rpusd3	100	72.674	Peromyscus_maniculatus_bairdii
ENSSBOG00000036106	RPUSD3	83	65.172	ENSPCIG00000021901	RPUSD3	84	65.172	Phascolarctos_cinereus
ENSSBOG00000036106	RPUSD3	100	88.034	ENSPPYG00000013676	RPUSD3	100	88.034	Pongo_abelii
ENSSBOG00000036106	RPUSD3	82	58.824	ENSPCAG00000013731	-	100	58.824	Procavia_capensis
ENSSBOG00000036106	RPUSD3	100	82.955	ENSPCOG00000018314	RPUSD3	100	82.955	Propithecus_coquereli
ENSSBOG00000036106	RPUSD3	100	78.470	ENSPVAG00000011107	RPUSD3	100	78.470	Pteropus_vampyrus
ENSSBOG00000036106	RPUSD3	95	72.240	ENSRNOG00000009084	Rpusd3	96	72.240	Rattus_norvegicus
ENSSBOG00000036106	RPUSD3	100	88.604	ENSRBIG00000041230	RPUSD3	100	88.604	Rhinopithecus_bieti
ENSSBOG00000036106	RPUSD3	100	88.889	ENSRROG00000043328	RPUSD3	100	88.889	Rhinopithecus_roxellana
ENSSBOG00000036106	RPUSD3	86	61.000	ENSSHAG00000015536	RPUSD3	99	60.000	Sarcophilus_harrisii
ENSSBOG00000036106	RPUSD3	100	77.557	ENSSSCG00000011555	RPUSD3	100	77.557	Sus_scrofa
ENSSBOG00000036106	RPUSD3	67	53.648	ENSTGUG00000008744	RPUSD3	93	53.456	Taeniopygia_guttata
ENSSBOG00000036106	RPUSD3	82	74.828	ENSTBEG00000000176	RPUSD3	100	74.828	Tupaia_belangeri
ENSSBOG00000036106	RPUSD3	100	77.620	ENSTTRG00000007544	RPUSD3	100	77.620	Tursiops_truncatus
ENSSBOG00000036106	RPUSD3	90	80.255	ENSUAMG00000011354	RPUSD3	98	80.255	Ursus_americanus
ENSSBOG00000036106	RPUSD3	100	77.557	ENSUMAG00000018830	RPUSD3	100	77.557	Ursus_maritimus
ENSSBOG00000036106	RPUSD3	98	79.360	ENSVVUG00000023735	RPUSD3	100	79.360	Vulpes_vulpes
ENSSBOG00000036106	RPUSD3	80	50.890	ENSXETG00000023546	rpusd3	99	50.890	Xenopus_tropicalis