EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000036197 (Gene tree)
Gene ID: 101041009
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 50334 bases
Position: chrJH378141.1:15691174-15741507
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000040433	Ago_hook	PF10427.9	1.5e-19	1	1
ENSSBOP00000040432	Ago_hook	PF10427.9	4.2e-19	1	1
ENSSBOP00000040435	Ago_hook	PF10427.9	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000057398	TNRC6A-201	5667	XM_003930209	ENSSBOP00000040432	1888 (aa)	XP_003930258	A0A2K6V8D8
ENSSBOT00000057399	TNRC6A-202	9742	XM_010340792	ENSSBOP00000040433	1706 (aa)	XP_010339094	A0A2K6V8F8
ENSSBOT00000057401	TNRC6A-203	9709	-	ENSSBOP00000040435	1695 (aa)	-	A0A2K6V8F7

Gene Model

Click here to download ENSSBOG00000036197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000036197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000036197	TNRC6A	99	38.462	ENSSBOG00000029743	TNRC6B	94	46.739
ENSSBOG00000036197	TNRC6A	99	42.998	ENSSBOG00000023981	TNRC6C	99	43.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000036197	TNRC6A	100	99.356	ENSG00000090905	TNRC6A	98	97.755	Homo_sapiens
ENSSBOG00000036197	TNRC6A	100	97.425	ENSAMEG00000009333	TNRC6A	100	95.714	Ailuropoda_melanoleuca
ENSSBOG00000036197	TNRC6A	100	83.828	ENSAPLG00000009978	TNRC6A	100	82.427	Anas_platyrhynchos
ENSSBOG00000036197	TNRC6A	99	55.301	ENSACAG00000011857	TNRC6A	97	56.616	Anolis_carolinensis
ENSSBOG00000036197	TNRC6A	100	99.648	ENSANAG00000025252	TNRC6A	98	98.427	Aotus_nancymaae
ENSSBOG00000036197	TNRC6A	100	56.805	ENSAMXG00000019919	tnrc6a	99	55.622	Astyanax_mexicanus
ENSSBOG00000036197	TNRC6A	100	96.548	ENSBTAG00000017999	TNRC6A	99	94.523	Bos_taurus
ENSSBOG00000036197	TNRC6A	100	99.766	ENSCJAG00000020677	TNRC6A	98	97.862	Callithrix_jacchus
ENSSBOG00000036197	TNRC6A	100	97.250	ENSCAFG00000017531	TNRC6A	98	95.711	Canis_familiaris
ENSSBOG00000036197	TNRC6A	100	96.021	ENSCAFG00020021160	TNRC6A	99	94.232	Canis_lupus_dingo
ENSSBOG00000036197	TNRC6A	100	93.037	ENSCHIG00000019448	TNRC6A	99	91.426	Capra_hircus
ENSSBOG00000036197	TNRC6A	100	97.425	ENSTSYG00000012711	TNRC6A	99	95.903	Carlito_syrichta
ENSSBOG00000036197	TNRC6A	100	94.207	ENSCPOG00000036684	TNRC6A	98	93.214	Cavia_porcellus
ENSSBOG00000036197	TNRC6A	100	99.824	ENSCCAG00000033664	TNRC6A	99	98.428	Cebus_capucinus
ENSSBOG00000036197	TNRC6A	100	98.252	ENSCATG00000019284	TNRC6A	97	96.570	Cercocebus_atys
ENSSBOG00000036197	TNRC6A	99	89.923	ENSCLAG00000010217	TNRC6A	98	88.488	Chinchilla_lanigera
ENSSBOG00000036197	TNRC6A	100	99.473	ENSCSAG00000006561	TNRC6A	98	98.014	Chlorocebus_sabaeus
ENSSBOG00000036197	TNRC6A	95	91.892	ENSCHOG00000009374	TNRC6A	92	91.831	Choloepus_hoffmanni
ENSSBOG00000036197	TNRC6A	100	80.762	ENSCPBG00000001881	TNRC6A	99	79.730	Chrysemys_picta_bellii
ENSSBOG00000036197	TNRC6A	100	99.473	ENSCANG00000041549	TNRC6A	98	98.168	Colobus_angolensis_palliatus
ENSSBOG00000036197	TNRC6A	99	95.230	ENSCGRG00001015021	Tnrc6a	99	93.760	Cricetulus_griseus_chok1gshd
ENSSBOG00000036197	TNRC6A	99	91.755	ENSCGRG00000013351	Tnrc6a	97	90.694	Cricetulus_griseus_crigri
ENSSBOG00000036197	TNRC6A	100	57.086	ENSDARG00000079688	tnrc6a	99	56.009	Danio_rerio
ENSSBOG00000036197	TNRC6A	100	94.749	ENSDNOG00000013989	TNRC6A	99	93.901	Dasypus_novemcinctus
ENSSBOG00000036197	TNRC6A	99	85.445	ENSETEG00000014658	TNRC6A	99	84.777	Echinops_telfairi
ENSSBOG00000036197	TNRC6A	100	97.193	ENSEASG00005017693	TNRC6A	99	95.947	Equus_asinus_asinus
ENSSBOG00000036197	TNRC6A	100	97.193	ENSECAG00000025056	TNRC6A	99	95.906	Equus_caballus
ENSSBOG00000036197	TNRC6A	100	90.643	ENSEEUG00000004530	TNRC6A	99	88.570	Erinaceus_europaeus
ENSSBOG00000036197	TNRC6A	100	96.255	ENSFCAG00000025236	TNRC6A	99	94.444	Felis_catus
ENSSBOG00000036197	TNRC6A	100	82.425	ENSFALG00000003757	TNRC6A	97	80.115	Ficedula_albicollis
ENSSBOG00000036197	TNRC6A	100	80.796	ENSGALG00000006068	TNRC6A	99	80.157	Gallus_gallus
ENSSBOG00000036197	TNRC6A	100	79.965	ENSGAGG00000023209	TNRC6A	99	79.251	Gopherus_agassizii
ENSSBOG00000036197	TNRC6A	100	99.239	ENSGGOG00000005137	TNRC6A	99	97.593	Gorilla_gorilla
ENSSBOG00000036197	TNRC6A	99	72.616	ENSHGLG00000007368	-	93	72.658	Heterocephalus_glaber_female
ENSSBOG00000036197	TNRC6A	99	92.752	ENSHGLG00000012474	-	97	91.772	Heterocephalus_glaber_female
ENSSBOG00000036197	TNRC6A	99	92.676	ENSHGLG00100012496	-	97	92.271	Heterocephalus_glaber_male
ENSSBOG00000036197	TNRC6A	100	96.957	ENSSTOG00000023394	TNRC6A	96	94.943	Ictidomys_tridecemlineatus
ENSSBOG00000036197	TNRC6A	99	70.486	ENSLACG00000006277	TNRC6A	100	70.705	Latimeria_chalumnae
ENSSBOG00000036197	TNRC6A	100	83.223	ENSLOCG00000005517	tnrc6a	90	83.223	Lepisosteus_oculatus
ENSSBOG00000036197	TNRC6A	100	92.632	ENSLAFG00000004209	TNRC6A	100	92.004	Loxodonta_africana
ENSSBOG00000036197	TNRC6A	100	98.193	ENSMFAG00000003824	TNRC6A	99	96.514	Macaca_fascicularis
ENSSBOG00000036197	TNRC6A	100	99.356	ENSMMUG00000020428	TNRC6A	98	98.064	Macaca_mulatta
ENSSBOG00000036197	TNRC6A	100	99.298	ENSMNEG00000034854	TNRC6A	99	96.564	Macaca_nemestrina
ENSSBOG00000036197	TNRC6A	100	98.193	ENSMLEG00000042737	TNRC6A	97	96.216	Mandrillus_leucophaeus
ENSSBOG00000036197	TNRC6A	100	83.169	ENSMGAG00000006455	TNRC6A	93	82.162	Meleagris_gallopavo
ENSSBOG00000036197	TNRC6A	99	92.403	ENSMAUG00000012750	Tnrc6a	98	91.487	Mesocricetus_auratus
ENSSBOG00000036197	TNRC6A	100	98.303	ENSMICG00000030685	TNRC6A	99	96.546	Microcebus_murinus
ENSSBOG00000036197	TNRC6A	99	93.400	ENSMOCG00000000152	Tnrc6a	98	92.004	Microtus_ochrogaster
ENSSBOG00000036197	TNRC6A	100	84.954	ENSMODG00000016348	TNRC6A	96	82.757	Monodelphis_domestica
ENSSBOG00000036197	TNRC6A	100	91.808	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.639	Mus_caroli
ENSSBOG00000036197	TNRC6A	100	92.159	ENSMUSG00000052707	Tnrc6a	99	94.996	Mus_musculus
ENSSBOG00000036197	TNRC6A	100	92.281	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.282	Mus_pahari
ENSSBOG00000036197	TNRC6A	100	95.026	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.996	Mus_spretus
ENSSBOG00000036197	TNRC6A	99	84.725	ENSMPUG00000012324	TNRC6A	100	82.733	Mustela_putorius_furo
ENSSBOG00000036197	TNRC6A	100	94.207	ENSMLUG00000002701	TNRC6A	100	92.616	Myotis_lucifugus
ENSSBOG00000036197	TNRC6A	99	93.698	ENSNGAG00000020702	Tnrc6a	98	92.651	Nannospalax_galili
ENSSBOG00000036197	TNRC6A	100	96.800	ENSNLEG00000011851	TNRC6A	98	95.450	Nomascus_leucogenys
ENSSBOG00000036197	TNRC6A	77	88.926	ENSMEUG00000015959	-	74	88.926	Notamacropus_eugenii
ENSSBOG00000036197	TNRC6A	95	99.627	ENSOPRG00000005819	TNRC6A	93	99.627	Ochotona_princeps
ENSSBOG00000036197	TNRC6A	99	88.987	ENSODEG00000012802	TNRC6A	97	88.070	Octodon_degus
ENSSBOG00000036197	TNRC6A	100	83.557	ENSOANG00000007672	TNRC6A	99	83.558	Ornithorhynchus_anatinus
ENSSBOG00000036197	TNRC6A	100	94.971	ENSOCUG00000004325	TNRC6A	100	94.002	Oryctolagus_cuniculus
ENSSBOG00000036197	TNRC6A	100	97.721	ENSOGAG00000006666	TNRC6A	98	96.539	Otolemur_garnettii
ENSSBOG00000036197	TNRC6A	100	96.035	ENSOARG00000017950	TNRC6A	99	93.208	Ovis_aries
ENSSBOG00000036197	TNRC6A	100	99.298	ENSPPAG00000028379	TNRC6A	99	97.495	Pan_paniscus
ENSSBOG00000036197	TNRC6A	100	96.255	ENSPPRG00000005861	TNRC6A	98	94.444	Panthera_pardus
ENSSBOG00000036197	TNRC6A	100	96.197	ENSPTIG00000006346	TNRC6A	98	93.789	Panthera_tigris_altaica
ENSSBOG00000036197	TNRC6A	100	99.356	ENSPTRG00000007898	TNRC6A	99	97.496	Pan_troglodytes
ENSSBOG00000036197	TNRC6A	100	96.782	ENSPANG00000018523	TNRC6A	99	94.421	Papio_anubis
ENSSBOG00000036197	TNRC6A	96	75.862	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSSBOG00000036197	TNRC6A	89	74.886	ENSPSIG00000003965	TNRC6A	100	75.494	Pelodiscus_sinensis
ENSSBOG00000036197	TNRC6A	99	92.988	ENSPEMG00000016318	Tnrc6a	98	91.697	Peromyscus_maniculatus_bairdii
ENSSBOG00000036197	TNRC6A	100	86.604	ENSPCIG00000012106	TNRC6A	100	84.444	Phascolarctos_cinereus
ENSSBOG00000036197	TNRC6A	100	98.771	ENSPPYG00000007202	TNRC6A	98	97.183	Pongo_abelii
ENSSBOG00000036197	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	92	100.000	Procavia_capensis
ENSSBOG00000036197	TNRC6A	100	95.787	ENSPCOG00000010134	TNRC6A	98	94.253	Propithecus_coquereli
ENSSBOG00000036197	TNRC6A	88	73.182	ENSPVAG00000012066	TNRC6A	97	71.057	Pteropus_vampyrus
ENSSBOG00000036197	TNRC6A	99	94.953	ENSRNOG00000024737	Tnrc6a	98	92.682	Rattus_norvegicus
ENSSBOG00000036197	TNRC6A	100	99.473	ENSRBIG00000014222	TNRC6A	99	98.116	Rhinopithecus_bieti
ENSSBOG00000036197	TNRC6A	100	99.473	ENSRROG00000032360	TNRC6A	98	98.270	Rhinopithecus_roxellana
ENSSBOG00000036197	TNRC6A	100	82.407	ENSSHAG00000008811	TNRC6A	99	83.049	Sarcophilus_harrisii
ENSSBOG00000036197	TNRC6A	96	65.569	ENSSFOG00015008920	tnrc6a	91	78.004	Scleropages_formosus
ENSSBOG00000036197	TNRC6A	73	83.152	ENSSARG00000002479	TNRC6A	89	82.609	Sorex_araneus
ENSSBOG00000036197	TNRC6A	100	78.999	ENSSPUG00000010525	TNRC6A	100	78.555	Sphenodon_punctatus
ENSSBOG00000036197	TNRC6A	100	97.601	ENSSSCG00000038870	TNRC6A	100	97.601	Sus_scrofa
ENSSBOG00000036197	TNRC6A	100	79.557	ENSTGUG00000006142	TNRC6A	97	78.692	Taeniopygia_guttata
ENSSBOG00000036197	TNRC6A	100	94.675	ENSTBEG00000014965	TNRC6A	100	93.521	Tupaia_belangeri
ENSSBOG00000036197	TNRC6A	93	97.843	ENSTTRG00000002008	TNRC6A	90	97.843	Tursiops_truncatus
ENSSBOG00000036197	TNRC6A	81	92.288	ENSUAMG00000006656	-	93	92.158	Ursus_americanus
ENSSBOG00000036197	TNRC6A	100	97.484	ENSUMAG00000008274	TNRC6A	99	96.304	Ursus_maritimus
ENSSBOG00000036197	TNRC6A	56	85.161	ENSVPAG00000010764	-	55	85.161	Vicugna_pacos
ENSSBOG00000036197	TNRC6A	100	97.250	ENSVVUG00000005380	TNRC6A	99	95.711	Vulpes_vulpes
ENSSBOG00000036197	TNRC6A	99	66.957	ENSXETG00000030437	TNRC6A	99	65.767	Xenopus_tropicalis