EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000112 (Gene tree)
Gene ID: 111231479
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC111231479
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 1341 bases
Position: chrBDQW01000301.1:1333093-1334433
Accession: 111231479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000060	zf-CCCH	PF00642.24	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000093	-	1199	XM_022758585	ENSSDUP00000000060	252 (aa)	XP_022614306	UPI000BBE9351

Gene Model

Click here to download ENSSDUG00000000112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000112	si:ch211-113e8.11	100	71.429	ENSAPOG00000010990	si:ch211-113e8.11	100	74.436	Acanthochromis_polyacanthus
ENSSDUG00000000112	si:ch211-113e8.11	59	71.812	ENSACIG00000011566	si:ch211-113e8.11	94	64.151	Amphilophus_citrinellus
ENSSDUG00000000112	si:ch211-113e8.11	100	72.727	ENSAOCG00000022156	si:ch211-113e8.11	100	72.727	Amphiprion_ocellaris
ENSSDUG00000000112	si:ch211-113e8.11	100	71.970	ENSAPEG00000018284	si:ch211-113e8.11	100	71.970	Amphiprion_percula
ENSSDUG00000000112	si:ch211-113e8.11	100	77.043	ENSATEG00000018391	si:ch211-113e8.11	100	75.097	Anabas_testudineus
ENSSDUG00000000112	si:ch211-113e8.11	100	67.843	ENSACLG00000017011	si:ch211-113e8.11	100	68.627	Astatotilapia_calliptera
ENSSDUG00000000112	si:ch211-113e8.11	97	50.000	ENSAMXG00000000733	si:ch211-113e8.11	97	46.642	Astyanax_mexicanus
ENSSDUG00000000112	si:ch211-113e8.11	99	69.349	ENSCSEG00000004538	si:ch211-113e8.11	99	68.199	Cynoglossus_semilaevis
ENSSDUG00000000112	si:ch211-113e8.11	100	61.176	ENSCVAG00000020156	si:ch211-113e8.11	99	60.784	Cyprinodon_variegatus
ENSSDUG00000000112	si:ch211-113e8.11	96	45.783	ENSDARG00000076585	si:ch211-113e8.11	98	47.967	Danio_rerio
ENSSDUG00000000112	si:ch211-113e8.11	100	56.015	ENSELUG00000001130	si:ch211-113e8.11	100	50.362	Esox_lucius
ENSSDUG00000000112	si:ch211-113e8.11	100	58.755	ENSFHEG00000007870	si:ch211-113e8.11	99	57.088	Fundulus_heteroclitus
ENSSDUG00000000112	si:ch211-113e8.11	100	63.529	ENSGAFG00000020570	si:ch211-113e8.11	100	63.529	Gambusia_affinis
ENSSDUG00000000112	si:ch211-113e8.11	100	68.235	ENSHBUG00000003552	si:ch211-113e8.11	100	68.627	Haplochromis_burtoni
ENSSDUG00000000112	si:ch211-113e8.11	99	55.859	ENSHCOG00000002041	si:ch211-113e8.11	99	54.615	Hippocampus_comes
ENSSDUG00000000112	si:ch211-113e8.11	96	51.969	ENSIPUG00000002260	si:ch211-113e8.11	94	51.181	Ictalurus_punctatus
ENSSDUG00000000112	si:ch211-113e8.11	100	66.926	ENSKMAG00000000086	si:ch211-113e8.11	99	66.148	Kryptolebias_marmoratus
ENSSDUG00000000112	si:ch211-113e8.11	100	65.672	ENSLBEG00000008353	si:ch211-113e8.11	100	67.286	Labrus_bergylta
ENSSDUG00000000112	si:ch211-113e8.11	75	39.175	ENSLACG00000004304	si:ch211-113e8.11	73	43.976	Latimeria_chalumnae
ENSSDUG00000000112	si:ch211-113e8.11	90	75.431	ENSMAMG00000019098	si:ch211-113e8.11	93	76.293	Mastacembelus_armatus
ENSSDUG00000000112	si:ch211-113e8.11	100	66.667	ENSMZEG00005023658	si:ch211-113e8.11	100	67.451	Maylandia_zebra
ENSSDUG00000000112	si:ch211-113e8.11	73	71.351	ENSMMOG00000007254	si:ch211-113e8.11	100	59.524	Mola_mola
ENSSDUG00000000112	si:ch211-113e8.11	100	78.378	ENSMALG00000005110	si:ch211-113e8.11	100	76.448	Monopterus_albus
ENSSDUG00000000112	si:ch211-113e8.11	100	68.627	ENSNBRG00000015060	si:ch211-113e8.11	100	69.412	Neolamprologus_brichardi
ENSSDUG00000000112	si:ch211-113e8.11	100	63.077	ENSORLG00000023699	si:ch211-113e8.11	100	59.615	Oryzias_latipes
ENSSDUG00000000112	si:ch211-113e8.11	100	65.385	ENSORLG00020022094	si:ch211-113e8.11	100	61.923	Oryzias_latipes_hni
ENSSDUG00000000112	si:ch211-113e8.11	100	62.308	ENSORLG00015002588	si:ch211-113e8.11	100	59.231	Oryzias_latipes_hsok
ENSSDUG00000000112	si:ch211-113e8.11	100	64.567	ENSOMEG00000010624	si:ch211-113e8.11	100	64.567	Oryzias_melastigma
ENSSDUG00000000112	si:ch211-113e8.11	57	48.667	ENSPKIG00000023576	si:ch211-113e8.11	96	42.529	Paramormyrops_kingsleyae
ENSSDUG00000000112	si:ch211-113e8.11	96	55.691	ENSPMGG00000018547	si:ch211-113e8.11	97	54.656	Periophthalmus_magnuspinnatus
ENSSDUG00000000112	si:ch211-113e8.11	98	64.659	ENSPFOG00000007950	si:ch211-113e8.11	100	64.800	Poecilia_formosa
ENSSDUG00000000112	si:ch211-113e8.11	100	65.098	ENSPLAG00000002081	si:ch211-113e8.11	100	65.625	Poecilia_latipinna
ENSSDUG00000000112	si:ch211-113e8.11	100	65.882	ENSPMEG00000017505	si:ch211-113e8.11	100	66.406	Poecilia_mexicana
ENSSDUG00000000112	si:ch211-113e8.11	100	65.476	ENSPREG00000008530	si:ch211-113e8.11	100	66.008	Poecilia_reticulata
ENSSDUG00000000112	si:ch211-113e8.11	100	68.235	ENSPNYG00000022856	si:ch211-113e8.11	100	69.020	Pundamilia_nyererei
ENSSDUG00000000112	si:ch211-113e8.11	98	43.922	ENSPNAG00000013782	si:ch211-113e8.11	99	43.580	Pygocentrus_nattereri
ENSSDUG00000000112	si:ch211-113e8.11	97	49.606	ENSSFOG00015000959	si:ch211-113e8.11	97	48.425	Scleropages_formosus
ENSSDUG00000000112	si:ch211-113e8.11	100	77.470	ENSSMAG00000009732	si:ch211-113e8.11	100	78.261	Scophthalmus_maximus
ENSSDUG00000000112	si:ch211-113e8.11	100	98.016	ENSSLDG00000003287	si:ch211-113e8.11	100	98.016	Seriola_lalandi_dorsalis
ENSSDUG00000000112	si:ch211-113e8.11	100	73.684	ENSSPAG00000001375	si:ch211-113e8.11	100	75.285	Stegastes_partitus
ENSSDUG00000000112	si:ch211-113e8.11	99	56.863	ENSTRUG00000023898	si:ch211-113e8.11	99	56.863	Takifugu_rubripes
ENSSDUG00000000112	si:ch211-113e8.11	100	63.922	ENSXMAG00000024104	si:ch211-113e8.11	100	64.844	Xiphophorus_maculatus