EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000225 (Gene tree)
Gene ID: 111224390
Gene Symbol: trip4
Alias: im:7143009|si:busm1-221i3.1|si:dkey-173l11.4|zgc:153348
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 69090 bases
Position: chrBDQW01000011.1:4962346-5031435
Accession: 111224390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000218	ASCH	PF04266.14	4.4e-20	1	1
ENSSDUP00000000194	ASCH	PF04266.14	4.7e-20	1	1
ENSSDUP00000000207	ASCH	PF04266.14	2.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000242	-	2083	-	ENSSDUP00000000207	610 (aa)	-	-
ENSSDUT00000000253	-	1920	-	ENSSDUP00000000218	555 (aa)	-	-
ENSSDUT00000000227	-	2186	XM_022748862	ENSSDUP00000000194	573 (aa)	XP_022604583	UPI000BBF07AD

Gene Model

Click here to download ENSSDUG00000000225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000225	trip4	99	59.310	ENSG00000103671	TRIP4	97	58.448	Homo_sapiens
ENSSDUG00000000225	trip4	81	83.281	ENSAPOG00000023326	trip4	85	80.480	Acanthochromis_polyacanthus
ENSSDUG00000000225	trip4	99	57.857	ENSAMEG00000002591	TRIP4	97	57.317	Ailuropoda_melanoleuca
ENSSDUG00000000225	trip4	100	76.036	ENSACIG00000010577	trip4	98	76.268	Amphilophus_citrinellus
ENSSDUG00000000225	trip4	94	84.393	ENSAOCG00000000395	trip4	91	84.393	Amphiprion_ocellaris
ENSSDUG00000000225	trip4	100	85.864	ENSAPEG00000003621	trip4	100	85.864	Amphiprion_percula
ENSSDUG00000000225	trip4	100	87.784	ENSATEG00000019577	trip4	100	86.736	Anabas_testudineus
ENSSDUG00000000225	trip4	99	62.306	ENSAPLG00000004612	TRIP4	99	62.134	Anas_platyrhynchos
ENSSDUG00000000225	trip4	99	59.585	ENSACAG00000007077	TRIP4	89	59.585	Anolis_carolinensis
ENSSDUG00000000225	trip4	99	58.609	ENSANAG00000027612	TRIP4	97	57.739	Aotus_nancymaae
ENSSDUG00000000225	trip4	100	86.562	ENSACLG00000013819	trip4	100	86.562	Astatotilapia_calliptera
ENSSDUG00000000225	trip4	99	74.595	ENSAMXG00000007270	trip4	100	74.476	Astyanax_mexicanus
ENSSDUG00000000225	trip4	99	58.169	ENSBTAG00000014493	TRIP4	97	57.592	Bos_taurus
ENSSDUG00000000225	trip4	99	57.858	ENSCJAG00000005107	TRIP4	97	57.391	Callithrix_jacchus
ENSSDUG00000000225	trip4	99	57.961	ENSCAFG00000017091	TRIP4	97	57.417	Canis_familiaris
ENSSDUG00000000225	trip4	99	57.961	ENSCAFG00020008960	TRIP4	97	57.417	Canis_lupus_dingo
ENSSDUG00000000225	trip4	99	57.016	ENSCHIG00000023818	TRIP4	96	55.950	Capra_hircus
ENSSDUG00000000225	trip4	99	57.645	ENSTSYG00000007185	TRIP4	97	57.290	Carlito_syrichta
ENSSDUG00000000225	trip4	66	71.053	ENSCAPG00000017624	TRIP4	94	48.344	Cavia_aperea
ENSSDUG00000000225	trip4	99	58.304	ENSCPOG00000006483	TRIP4	97	57.439	Cavia_porcellus
ENSSDUG00000000225	trip4	99	55.749	ENSCCAG00000026483	TRIP4	97	54.704	Cebus_capucinus
ENSSDUG00000000225	trip4	99	59.483	ENSCATG00000041144	TRIP4	97	58.621	Cercocebus_atys
ENSSDUG00000000225	trip4	99	58.609	ENSCLAG00000006872	TRIP4	97	57.739	Chinchilla_lanigera
ENSSDUG00000000225	trip4	99	59.549	ENSCSAG00000012499	TRIP4	97	58.681	Chlorocebus_sabaeus
ENSSDUG00000000225	trip4	76	55.281	ENSCHOG00000010776	TRIP4	73	54.801	Choloepus_hoffmanni
ENSSDUG00000000225	trip4	99	61.141	ENSCPBG00000006093	TRIP4	97	61.580	Chrysemys_picta_bellii
ENSSDUG00000000225	trip4	99	43.718	ENSCSAVG00000005293	-	98	43.771	Ciona_savignyi
ENSSDUG00000000225	trip4	99	57.193	ENSCANG00000033593	TRIP4	97	56.316	Colobus_angolensis_palliatus
ENSSDUG00000000225	trip4	99	57.726	ENSCGRG00001021158	Trip4	97	57.192	Cricetulus_griseus_chok1gshd
ENSSDUG00000000225	trip4	99	42.883	ENSCGRG00000002340	Trip4	97	56.652	Cricetulus_griseus_crigri
ENSSDUG00000000225	trip4	100	80.662	ENSCSEG00000009015	trip4	99	79.965	Cynoglossus_semilaevis
ENSSDUG00000000225	trip4	94	79.769	ENSCVAG00000020984	trip4	99	79.769	Cyprinodon_variegatus
ENSSDUG00000000225	trip4	98	73.262	ENSCVAG00000021094	-	96	73.262	Cyprinodon_variegatus
ENSSDUG00000000225	trip4	99	72.383	ENSDARG00000098074	trip4	100	72.154	Danio_rerio
ENSSDUG00000000225	trip4	99	58.897	ENSDNOG00000008654	TRIP4	97	59.059	Dasypus_novemcinctus
ENSSDUG00000000225	trip4	99	57.340	ENSDORG00000014914	Trip4	97	56.477	Dipodomys_ordii
ENSSDUG00000000225	trip4	77	42.793	FBgn0031115	CG11710	80	43.326	Drosophila_melanogaster
ENSSDUG00000000225	trip4	99	58.497	ENSETEG00000001597	TRIP4	96	58.115	Echinops_telfairi
ENSSDUG00000000225	trip4	99	47.160	ENSEBUG00000009039	trip4	99	47.504	Eptatretus_burgeri
ENSSDUG00000000225	trip4	99	58.855	ENSEASG00005006538	TRIP4	97	58.290	Equus_asinus_asinus
ENSSDUG00000000225	trip4	93	57.744	ENSECAG00000024689	TRIP4	95	56.571	Equus_caballus
ENSSDUG00000000225	trip4	73	70.000	ENSEEUG00000007741	TRIP4	73	70.000	Erinaceus_europaeus
ENSSDUG00000000225	trip4	99	73.124	ENSELUG00000022449	trip4	99	73.124	Esox_lucius
ENSSDUG00000000225	trip4	99	57.951	ENSFCAG00000010618	TRIP4	97	57.414	Felis_catus
ENSSDUG00000000225	trip4	99	60.825	ENSFALG00000009816	TRIP4	99	60.309	Ficedula_albicollis
ENSSDUG00000000225	trip4	99	57.913	ENSFDAG00000017051	TRIP4	97	57.913	Fukomys_damarensis
ENSSDUG00000000225	trip4	100	83.101	ENSFHEG00000015795	trip4	100	83.101	Fundulus_heteroclitus
ENSSDUG00000000225	trip4	100	77.083	ENSGMOG00000008455	trip4	100	77.083	Gadus_morhua
ENSSDUG00000000225	trip4	99	61.207	ENSGALG00000030672	TRIP4	99	60.517	Gallus_gallus
ENSSDUG00000000225	trip4	99	81.469	ENSGAFG00000003491	trip4	99	81.469	Gambusia_affinis
ENSSDUG00000000225	trip4	100	80.412	ENSGACG00000016986	trip4	100	80.412	Gasterosteus_aculeatus
ENSSDUG00000000225	trip4	83	64.468	ENSGAGG00000003671	TRIP4	83	64.468	Gopherus_agassizii
ENSSDUG00000000225	trip4	99	59.043	ENSGGOG00000022608	TRIP4	97	58.448	Gorilla_gorilla
ENSSDUG00000000225	trip4	100	86.387	ENSHBUG00000021071	trip4	100	86.387	Haplochromis_burtoni
ENSSDUG00000000225	trip4	99	57.168	ENSHGLG00000009286	TRIP4	97	56.304	Heterocephalus_glaber_female
ENSSDUG00000000225	trip4	99	57.043	ENSHGLG00100017760	TRIP4	97	56.174	Heterocephalus_glaber_male
ENSSDUG00000000225	trip4	100	80.977	ENSHCOG00000017904	trip4	100	80.977	Hippocampus_comes
ENSSDUG00000000225	trip4	99	72.172	ENSIPUG00000013205	trip4	100	71.701	Ictalurus_punctatus
ENSSDUG00000000225	trip4	99	58.621	ENSSTOG00000014228	TRIP4	97	57.759	Ictidomys_tridecemlineatus
ENSSDUG00000000225	trip4	99	52.072	ENSJJAG00000001629	Trip4	98	51.171	Jaculus_jaculus
ENSSDUG00000000225	trip4	100	83.072	ENSKMAG00000001297	trip4	100	83.072	Kryptolebias_marmoratus
ENSSDUG00000000225	trip4	100	86.213	ENSLBEG00000018354	trip4	100	86.213	Labrus_bergylta
ENSSDUG00000000225	trip4	99	61.379	ENSLACG00000014856	TRIP4	99	61.658	Latimeria_chalumnae
ENSSDUG00000000225	trip4	99	68.804	ENSLOCG00000014993	trip4	99	68.111	Lepisosteus_oculatus
ENSSDUG00000000225	trip4	99	59.213	ENSLAFG00000017612	TRIP4	97	58.813	Loxodonta_africana
ENSSDUG00000000225	trip4	99	59.722	ENSMFAG00000036568	TRIP4	97	58.854	Macaca_fascicularis
ENSSDUG00000000225	trip4	99	59.722	ENSMMUG00000009882	TRIP4	97	58.854	Macaca_mulatta
ENSSDUG00000000225	trip4	99	59.722	ENSMNEG00000033592	TRIP4	97	58.854	Macaca_nemestrina
ENSSDUG00000000225	trip4	99	59.549	ENSMLEG00000027911	TRIP4	97	58.681	Mandrillus_leucophaeus
ENSSDUG00000000225	trip4	100	87.108	ENSMAMG00000013374	trip4	100	86.261	Mastacembelus_armatus
ENSSDUG00000000225	trip4	100	86.562	ENSMZEG00005013450	trip4	100	86.562	Maylandia_zebra
ENSSDUG00000000225	trip4	99	60.000	ENSMICG00000008679	TRIP4	97	59.582	Microcebus_murinus
ENSSDUG00000000225	trip4	99	59.036	ENSMOCG00000012669	Trip4	97	58.003	Microtus_ochrogaster
ENSSDUG00000000225	trip4	99	82.428	ENSMMOG00000002315	trip4	98	82.428	Mola_mola
ENSSDUG00000000225	trip4	99	61.005	ENSMODG00000010743	TRIP4	89	61.005	Monodelphis_domestica
ENSSDUG00000000225	trip4	99	58.003	MGP_CAROLIEiJ_G0032370	Trip4	97	57.143	Mus_caroli
ENSSDUG00000000225	trip4	99	57.858	ENSMUSG00000032386	Trip4	97	56.822	Mus_musculus
ENSSDUG00000000225	trip4	99	56.849	MGP_PahariEiJ_G0015235	Trip4	97	55.822	Mus_pahari
ENSSDUG00000000225	trip4	99	58.031	MGP_SPRETEiJ_G0033509	Trip4	97	56.995	Mus_spretus
ENSSDUG00000000225	trip4	99	57.245	ENSMPUG00000000568	TRIP4	97	56.719	Mustela_putorius_furo
ENSSDUG00000000225	trip4	95	58.951	ENSMLUG00000013367	TRIP4	99	57.866	Myotis_lucifugus
ENSSDUG00000000225	trip4	99	57.633	ENSNGAG00000019566	Trip4	97	56.604	Nannospalax_galili
ENSSDUG00000000225	trip4	99	84.629	ENSNBRG00000020663	trip4	98	83.871	Neolamprologus_brichardi
ENSSDUG00000000225	trip4	99	59.549	ENSNLEG00000012455	TRIP4	97	58.681	Nomascus_leucogenys
ENSSDUG00000000225	trip4	64	59.140	ENSMEUG00000005886	TRIP4	75	59.140	Notamacropus_eugenii
ENSSDUG00000000225	trip4	99	55.903	ENSOPRG00000009512	TRIP4	98	55.035	Ochotona_princeps
ENSSDUG00000000225	trip4	99	57.313	ENSODEG00000016494	TRIP4	97	57.513	Octodon_degus
ENSSDUG00000000225	trip4	93	83.840	ENSONIG00000005703	trip4	99	83.840	Oreochromis_niloticus
ENSSDUG00000000225	trip4	99	61.179	ENSOANG00000013357	TRIP4	96	60.139	Ornithorhynchus_anatinus
ENSSDUG00000000225	trip4	99	58.204	ENSOCUG00000002322	TRIP4	97	57.340	Oryctolagus_cuniculus
ENSSDUG00000000225	trip4	100	78.010	ENSORLG00000001710	trip4	100	78.010	Oryzias_latipes
ENSSDUG00000000225	trip4	100	77.836	ENSORLG00020022346	trip4	100	77.836	Oryzias_latipes_hni
ENSSDUG00000000225	trip4	100	77.487	ENSORLG00015022509	trip4	100	77.487	Oryzias_latipes_hsok
ENSSDUG00000000225	trip4	100	78.534	ENSOMEG00000007655	trip4	100	78.534	Oryzias_melastigma
ENSSDUG00000000225	trip4	99	52.632	ENSOGAG00000012427	TRIP4	97	53.103	Otolemur_garnettii
ENSSDUG00000000225	trip4	99	57.371	ENSOARG00000020739	TRIP4	97	56.846	Ovis_aries
ENSSDUG00000000225	trip4	99	59.310	ENSPPAG00000017953	TRIP4	97	58.448	Pan_paniscus
ENSSDUG00000000225	trip4	99	57.951	ENSPPRG00000013668	TRIP4	97	57.414	Panthera_pardus
ENSSDUG00000000225	trip4	99	57.774	ENSPTIG00000014502	TRIP4	97	57.241	Panthera_tigris_altaica
ENSSDUG00000000225	trip4	99	55.250	ENSPTRG00000007160	TRIP4	97	54.389	Pan_troglodytes
ENSSDUG00000000225	trip4	99	59.549	ENSPANG00000016750	TRIP4	97	58.681	Papio_anubis
ENSSDUG00000000225	trip4	94	65.720	ENSPKIG00000009253	trip4	99	65.844	Paramormyrops_kingsleyae
ENSSDUG00000000225	trip4	99	68.221	ENSPKIG00000022978	-	100	68.221	Paramormyrops_kingsleyae
ENSSDUG00000000225	trip4	95	61.221	ENSPSIG00000012082	TRIP4	98	61.221	Pelodiscus_sinensis
ENSSDUG00000000225	trip4	99	78.700	ENSPMGG00000019015	trip4	94	78.700	Periophthalmus_magnuspinnatus
ENSSDUG00000000225	trip4	99	57.414	ENSPEMG00000012446	Trip4	97	56.379	Peromyscus_maniculatus_bairdii
ENSSDUG00000000225	trip4	99	60.485	ENSPCIG00000029450	TRIP4	93	60.485	Phascolarctos_cinereus
ENSSDUG00000000225	trip4	99	82.867	ENSPFOG00000014732	trip4	99	82.867	Poecilia_formosa
ENSSDUG00000000225	trip4	99	82.343	ENSPLAG00000013794	trip4	99	82.343	Poecilia_latipinna
ENSSDUG00000000225	trip4	99	82.692	ENSPMEG00000001331	trip4	99	82.692	Poecilia_mexicana
ENSSDUG00000000225	trip4	99	81.469	ENSPREG00000006576	trip4	99	81.469	Poecilia_reticulata
ENSSDUG00000000225	trip4	99	59.549	ENSPPYG00000006550	TRIP4	97	58.681	Pongo_abelii
ENSSDUG00000000225	trip4	99	50.984	ENSPCAG00000016310	TRIP4	97	50.611	Procavia_capensis
ENSSDUG00000000225	trip4	99	46.127	ENSPCOG00000013484	TRIP4	97	45.969	Propithecus_coquereli
ENSSDUG00000000225	trip4	99	51.246	ENSPVAG00000016613	TRIP4	98	50.984	Pteropus_vampyrus
ENSSDUG00000000225	trip4	99	75.543	ENSPNYG00000011318	trip4	95	75.906	Pundamilia_nyererei
ENSSDUG00000000225	trip4	99	74.506	ENSPNAG00000020884	trip4	99	74.390	Pygocentrus_nattereri
ENSSDUG00000000225	trip4	99	57.831	ENSRNOG00000016121	Trip4	97	56.379	Rattus_norvegicus
ENSSDUG00000000225	trip4	86	60.753	ENSRBIG00000038027	TRIP4	97	60.753	Rhinopithecus_bieti
ENSSDUG00000000225	trip4	99	59.549	ENSRROG00000030525	TRIP4	97	58.681	Rhinopithecus_roxellana
ENSSDUG00000000225	trip4	99	52.113	ENSSBOG00000020516	TRIP4	97	51.937	Saimiri_boliviensis_boliviensis
ENSSDUG00000000225	trip4	95	61.191	ENSSHAG00000000040	TRIP4	99	61.191	Sarcophilus_harrisii
ENSSDUG00000000225	trip4	99	67.126	ENSSFOG00015000143	trip4	99	66.954	Scleropages_formosus
ENSSDUG00000000225	trip4	99	84.790	ENSSMAG00000010539	trip4	100	84.790	Scophthalmus_maximus
ENSSDUG00000000225	trip4	100	98.953	ENSSLDG00000000215	trip4	100	98.953	Seriola_lalandi_dorsalis
ENSSDUG00000000225	trip4	81	59.467	ENSSARG00000003710	TRIP4	79	59.467	Sorex_araneus
ENSSDUG00000000225	trip4	99	56.373	ENSSPUG00000004511	TRIP4	98	56.250	Sphenodon_punctatus
ENSSDUG00000000225	trip4	100	87.304	ENSSPAG00000008520	trip4	100	87.304	Stegastes_partitus
ENSSDUG00000000225	trip4	99	58.929	ENSSSCG00000004552	TRIP4	97	59.677	Sus_scrofa
ENSSDUG00000000225	trip4	99	59.792	ENSTGUG00000004673	TRIP4	99	59.792	Taeniopygia_guttata
ENSSDUG00000000225	trip4	100	80.488	ENSTRUG00000016488	trip4	100	80.488	Takifugu_rubripes
ENSSDUG00000000225	trip4	99	76.292	ENSTNIG00000009582	trip4	98	74.871	Tetraodon_nigroviridis
ENSSDUG00000000225	trip4	95	58.965	ENSTBEG00000015881	TRIP4	99	58.378	Tupaia_belangeri
ENSSDUG00000000225	trip4	87	64.754	ENSTTRG00000009674	TRIP4	86	64.754	Tursiops_truncatus
ENSSDUG00000000225	trip4	99	57.500	ENSUMAG00000012640	TRIP4	97	56.969	Ursus_maritimus
ENSSDUG00000000225	trip4	99	54.255	ENSVPAG00000010808	TRIP4	97	53.806	Vicugna_pacos
ENSSDUG00000000225	trip4	99	57.857	ENSVVUG00000013776	TRIP4	97	57.317	Vulpes_vulpes
ENSSDUG00000000225	trip4	99	59.177	ENSXETG00000010649	trip4	98	59.177	Xenopus_tropicalis
ENSSDUG00000000225	trip4	99	81.993	ENSXMAG00000000526	trip4	99	81.993	Xiphophorus_maculatus