EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000242 (Gene tree)
Gene ID: 111232766
Gene Symbol: rbmx
Alias: fc66e11|wu:fb37c07|wu:fc66e11
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5571 bases
Position: chrBDQW01000331.1:3784624-3790194
Accession: 111232766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000282	RBM1CTR	PF08081.11	3.8e-19	1	1
ENSSDUP00000000269	RBM1CTR	PF08081.11	4.5e-19	1	1
ENSSDUP00000000282	RRM_1	PF00076.22	7.3e-25	1	1
ENSSDUP00000000269	RRM_1	PF00076.22	8.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000304	-	3429	-	ENSSDUP00000000269	429 (aa)	-	-
ENSSDUT00000000317	-	3001	XM_022760416	ENSSDUP00000000282	393 (aa)	XP_022616137	UPI000BBE91B4

Gene Model

Click here to download ENSSDUG00000000242's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000242	rbmx	100	97.201	ENSAPOG00000006496	rbmx	100	97.201	Acanthochromis_polyacanthus
ENSSDUG00000000242	rbmx	98	90.155	ENSACIG00000011598	rbmx	98	90.155	Amphilophus_citrinellus
ENSSDUG00000000242	rbmx	100	94.148	ENSACIG00000011576	rbmx	100	94.148	Amphilophus_citrinellus
ENSSDUG00000000242	rbmx	100	98.728	ENSAOCG00000020930	rbmx	100	98.728	Amphiprion_ocellaris
ENSSDUG00000000242	rbmx	100	97.964	ENSAPEG00000007316	rbmx	100	97.964	Amphiprion_percula
ENSSDUG00000000242	rbmx	100	97.201	ENSATEG00000017363	rbmx	100	97.201	Anabas_testudineus
ENSSDUG00000000242	rbmx	100	96.183	ENSACLG00000000098	rbmx	100	96.183	Astatotilapia_calliptera
ENSSDUG00000000242	rbmx	100	84.264	ENSAMXG00000019990	rbmx	93	86.066	Astyanax_mexicanus
ENSSDUG00000000242	rbmx	100	96.183	ENSCSEG00000005240	rbmx	100	96.183	Cynoglossus_semilaevis
ENSSDUG00000000242	rbmx	93	91.281	ENSCVAG00000008876	rbmx	94	89.918	Cyprinodon_variegatus
ENSSDUG00000000242	rbmx	94	83.110	ENSDARG00000014244	rbmx	100	77.320	Danio_rerio
ENSSDUG00000000242	rbmx	96	52.500	ENSEBUG00000006778	rbmx	99	53.082	Eptatretus_burgeri
ENSSDUG00000000242	rbmx	100	86.041	ENSELUG00000003600	rbmx	100	85.787	Esox_lucius
ENSSDUG00000000242	rbmx	93	91.826	ENSFHEG00000016764	rbmx	94	90.463	Fundulus_heteroclitus
ENSSDUG00000000242	rbmx	100	86.567	ENSGMOG00000004496	rbmx	100	84.826	Gadus_morhua
ENSSDUG00000000242	rbmx	100	91.603	ENSGAFG00000019917	rbmx	100	91.603	Gambusia_affinis
ENSSDUG00000000242	rbmx	100	92.250	ENSGACG00000017237	rbmx	100	92.250	Gasterosteus_aculeatus
ENSSDUG00000000242	rbmx	100	96.438	ENSHBUG00000015283	rbmx	100	96.438	Haplochromis_burtoni
ENSSDUG00000000242	rbmx	93	84.409	ENSHCOG00000001111	rbmx	100	83.333	Hippocampus_comes
ENSSDUG00000000242	rbmx	100	81.772	ENSIPUG00000022212	rbmx	93	82.240	Ictalurus_punctatus
ENSSDUG00000000242	rbmx	93	94.823	ENSKMAG00000001754	rbmx	100	92.734	Kryptolebias_marmoratus
ENSSDUG00000000242	rbmx	100	92.112	ENSLBEG00000010000	rbmx	100	92.112	Labrus_bergylta
ENSSDUG00000000242	rbmx	93	70.789	ENSLACG00000015261	rbmx	93	66.581	Latimeria_chalumnae
ENSSDUG00000000242	rbmx	94	85.942	ENSLOCG00000015142	rbmx	93	85.829	Lepisosteus_oculatus
ENSSDUG00000000242	rbmx	100	96.947	ENSMAMG00000020591	rbmx	100	96.947	Mastacembelus_armatus
ENSSDUG00000000242	rbmx	90	96.901	ENSMZEG00005006432	rbmx	87	96.901	Maylandia_zebra
ENSSDUG00000000242	rbmx	100	95.165	ENSMMOG00000001043	rbmx	100	93.893	Mola_mola
ENSSDUG00000000242	rbmx	100	91.858	ENSMALG00000009777	rbmx	100	91.858	Monopterus_albus
ENSSDUG00000000242	rbmx	100	95.929	ENSNBRG00000022154	rbmx	100	95.929	Neolamprologus_brichardi
ENSSDUG00000000242	rbmx	100	95.420	ENSONIG00000002700	rbmx	100	95.420	Oreochromis_niloticus
ENSSDUG00000000242	rbmx	100	90.633	ENSORLG00000001692	rbmx	100	85.570	Oryzias_latipes
ENSSDUG00000000242	rbmx	100	90.886	ENSORLG00020021132	rbmx	100	85.823	Oryzias_latipes_hni
ENSSDUG00000000242	rbmx	100	90.380	ENSORLG00015000330	rbmx	100	90.380	Oryzias_latipes_hsok
ENSSDUG00000000242	rbmx	100	90.886	ENSOMEG00000016787	rbmx	100	91.139	Oryzias_melastigma
ENSSDUG00000000242	rbmx	100	82.785	ENSPKIG00000024910	-	93	79.891	Paramormyrops_kingsleyae
ENSSDUG00000000242	rbmx	100	70.886	ENSPKIG00000017611	rbmx	93	68.966	Paramormyrops_kingsleyae
ENSSDUG00000000242	rbmx	100	80.407	ENSPMGG00000017906	rbmx	95	82.561	Periophthalmus_magnuspinnatus
ENSSDUG00000000242	rbmx	93	92.098	ENSPFOG00000013193	rbmx	93	90.736	Poecilia_formosa
ENSSDUG00000000242	rbmx	93	91.826	ENSPLAG00000010472	rbmx	93	90.463	Poecilia_latipinna
ENSSDUG00000000242	rbmx	93	92.098	ENSPMEG00000007579	rbmx	93	90.736	Poecilia_mexicana
ENSSDUG00000000242	rbmx	93	91.826	ENSPREG00000010279	rbmx	93	90.463	Poecilia_reticulata
ENSSDUG00000000242	rbmx	100	96.438	ENSPNYG00000012536	rbmx	100	96.438	Pundamilia_nyererei
ENSSDUG00000000242	rbmx	100	86.329	ENSPNAG00000019648	rbmx	93	88.011	Pygocentrus_nattereri
ENSSDUG00000000242	rbmx	93	80.109	ENSSFOG00015011749	-	93	74.932	Scleropages_formosus
ENSSDUG00000000242	rbmx	94	82.796	ENSSFOG00015008229	rbmx	93	83.152	Scleropages_formosus
ENSSDUG00000000242	rbmx	100	94.148	ENSSMAG00000014636	rbmx	100	91.349	Scophthalmus_maximus
ENSSDUG00000000242	rbmx	100	99.746	ENSSLDG00000021381	rbmx	100	99.746	Seriola_lalandi_dorsalis
ENSSDUG00000000242	rbmx	100	97.710	ENSSPAG00000008582	rbmx	100	97.710	Stegastes_partitus
ENSSDUG00000000242	rbmx	94	92.183	ENSTRUG00000006031	rbmx	100	91.603	Takifugu_rubripes
ENSSDUG00000000242	rbmx	94	89.402	ENSTNIG00000016844	rbmx	93	90.463	Tetraodon_nigroviridis
ENSSDUG00000000242	rbmx	64	60.232	ENSUAMG00000011752	-	85	57.940	Ursus_americanus
ENSSDUG00000000242	rbmx	64	59.846	ENSUMAG00000019276	-	85	57.511	Ursus_maritimus
ENSSDUG00000000242	rbmx	93	53.826	ENSXETG00000003481	rbmx	82	67.511	Xenopus_tropicalis
ENSSDUG00000000242	rbmx	91	85.196	ENSXCOG00000016084	rbmx	91	86.919	Xiphophorus_couchianus
ENSSDUG00000000242	rbmx	93	91.826	ENSXMAG00000013407	rbmx	93	90.736	Xiphophorus_maculatus