EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000287 (Gene tree)
Gene ID: 111221547
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 17513 bases
Position: chrBDQW01000088.1:12178536-12196048
Accession: 111221547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000308	PseudoU_synth_1	PF01416.20	5.5e-32	1	2
ENSSDUP00000000308	PseudoU_synth_1	PF01416.20	5.5e-32	2	2
ENSSDUP00000000324	PseudoU_synth_1	PF01416.20	3.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000343	-	4914	XM_022744987	ENSSDUP00000000308	323 (aa)	XP_022600708	UPI000BBE8B35
ENSSDUT00000000360	-	816	-	ENSSDUP00000000324	271 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000000287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000287	pusl1	93	47.312	ENSG00000169972	PUSL1	98	48.800	Homo_sapiens
ENSSDUG00000000287	pusl1	92	74.400	ENSAPOG00000016290	pusl1	97	75.433	Acanthochromis_polyacanthus
ENSSDUG00000000287	pusl1	94	46.237	ENSAMEG00000013752	PUSL1	90	49.275	Ailuropoda_melanoleuca
ENSSDUG00000000287	pusl1	96	78.077	ENSACIG00000015240	pusl1	100	77.737	Amphilophus_citrinellus
ENSSDUG00000000287	pusl1	97	75.285	ENSAOCG00000019419	pusl1	87	73.793	Amphiprion_ocellaris
ENSSDUG00000000287	pusl1	97	75.285	ENSAPEG00000005452	pusl1	97	74.394	Amphiprion_percula
ENSSDUG00000000287	pusl1	91	78.231	ENSATEG00000024154	pusl1	98	78.231	Anabas_testudineus
ENSSDUG00000000287	pusl1	93	49.638	ENSAPLG00000004946	PUSL1	92	52.708	Anas_platyrhynchos
ENSSDUG00000000287	pusl1	90	53.469	ENSACAG00000014111	PUSL1	98	53.846	Anolis_carolinensis
ENSSDUG00000000287	pusl1	92	48.364	ENSANAG00000037456	PUSL1	91	51.071	Aotus_nancymaae
ENSSDUG00000000287	pusl1	95	77.395	ENSACLG00000008675	pusl1	99	80.268	Astatotilapia_calliptera
ENSSDUG00000000287	pusl1	94	58.423	ENSAMXG00000044007	pusl1	96	61.832	Astyanax_mexicanus
ENSSDUG00000000287	pusl1	94	45.714	ENSBTAG00000007619	PUSL1	94	49.097	Bos_taurus
ENSSDUG00000000287	pusl1	92	48.000	ENSCJAG00000010972	PUSL1	91	50.714	Callithrix_jacchus
ENSSDUG00000000287	pusl1	93	47.451	ENSCAFG00000019291	PUSL1	90	47.482	Canis_familiaris
ENSSDUG00000000287	pusl1	93	45.878	ENSCAFG00020011568	PUSL1	90	48.561	Canis_lupus_dingo
ENSSDUG00000000287	pusl1	94	46.743	ENSCHIG00000012615	PUSL1	95	49.458	Capra_hircus
ENSSDUG00000000287	pusl1	93	44.245	ENSCPOG00000005149	PUSL1	89	47.653	Cavia_porcellus
ENSSDUG00000000287	pusl1	92	46.909	ENSCCAG00000027475	PUSL1	91	50.714	Cebus_capucinus
ENSSDUG00000000287	pusl1	93	46.595	ENSCATG00000018260	PUSL1	90	50.362	Cercocebus_atys
ENSSDUG00000000287	pusl1	93	45.161	ENSCLAG00000005232	PUSL1	90	48.201	Chinchilla_lanigera
ENSSDUG00000000287	pusl1	93	46.953	ENSCSAG00000000680	PUSL1	90	50.725	Chlorocebus_sabaeus
ENSSDUG00000000287	pusl1	93	53.623	ENSCPBG00000022621	PUSL1	95	56.631	Chrysemys_picta_bellii
ENSSDUG00000000287	pusl1	93	46.953	ENSCANG00000034373	PUSL1	90	50.725	Colobus_angolensis_palliatus
ENSSDUG00000000287	pusl1	99	43.003	ENSCGRG00001012429	Pusl1	98	45.548	Cricetulus_griseus_chok1gshd
ENSSDUG00000000287	pusl1	99	43.003	ENSCGRG00000006466	Pusl1	98	45.548	Cricetulus_griseus_crigri
ENSSDUG00000000287	pusl1	93	74.503	ENSCSEG00000005159	pusl1	100	74.503	Cynoglossus_semilaevis
ENSSDUG00000000287	pusl1	88	65.417	ENSCVAG00000012923	pusl1	92	65.417	Cyprinodon_variegatus
ENSSDUG00000000287	pusl1	95	62.633	ENSDARG00000074565	pusl1	99	66.977	Danio_rerio
ENSSDUG00000000287	pusl1	86	31.579	FBgn0083976	CG34140	99	31.579	Drosophila_melanogaster
ENSSDUG00000000287	pusl1	93	45.878	ENSECAG00000006248	PUSL1	89	49.818	Equus_caballus
ENSSDUG00000000287	pusl1	93	42.908	ENSEEUG00000000837	PUSL1	93	46.763	Erinaceus_europaeus
ENSSDUG00000000287	pusl1	92	64.103	ENSELUG00000015945	pusl1	95	68.100	Esox_lucius
ENSSDUG00000000287	pusl1	92	46.909	ENSFCAG00000007617	PUSL1	91	49.638	Felis_catus
ENSSDUG00000000287	pusl1	94	71.886	ENSFHEG00000006370	pusl1	96	76.736	Fundulus_heteroclitus
ENSSDUG00000000287	pusl1	94	67.730	ENSGMOG00000019388	pusl1	100	73.759	Gadus_morhua
ENSSDUG00000000287	pusl1	93	49.638	ENSGALG00000001714	PUSL1	96	53.214	Gallus_gallus
ENSSDUG00000000287	pusl1	95	70.213	ENSGAFG00000007546	pusl1	96	74.912	Gambusia_affinis
ENSSDUG00000000287	pusl1	93	73.927	ENSGACG00000007848	pusl1	100	73.927	Gasterosteus_aculeatus
ENSSDUG00000000287	pusl1	93	53.986	ENSGAGG00000004730	PUSL1	98	55.749	Gopherus_agassizii
ENSSDUG00000000287	pusl1	87	51.250	ENSGGOG00000005364	PUSL1	93	50.617	Gorilla_gorilla
ENSSDUG00000000287	pusl1	92	80.602	ENSHBUG00000001264	pusl1	99	80.602	Haplochromis_burtoni
ENSSDUG00000000287	pusl1	92	45.455	ENSHGLG00000017570	PUSL1	90	46.595	Heterocephalus_glaber_female
ENSSDUG00000000287	pusl1	92	45.455	ENSHGLG00100007641	PUSL1	82	47.012	Heterocephalus_glaber_male
ENSSDUG00000000287	pusl1	96	65.845	ENSHCOG00000010077	pusl1	100	75.000	Hippocampus_comes
ENSSDUG00000000287	pusl1	94	60.072	ENSIPUG00000023921	pusl1	97	64.539	Ictalurus_punctatus
ENSSDUG00000000287	pusl1	92	47.273	ENSSTOG00000001783	PUSL1	85	50.362	Ictidomys_tridecemlineatus
ENSSDUG00000000287	pusl1	93	46.931	ENSJJAG00000020471	Pusl1	93	50.000	Jaculus_jaculus
ENSSDUG00000000287	pusl1	88	74.059	ENSKMAG00000005154	pusl1	92	71.481	Kryptolebias_marmoratus
ENSSDUG00000000287	pusl1	90	76.370	ENSLBEG00000013469	pusl1	100	76.370	Labrus_bergylta
ENSSDUG00000000287	pusl1	70	54.404	ENSLACG00000018795	PUSL1	95	55.440	Latimeria_chalumnae
ENSSDUG00000000287	pusl1	94	55.872	ENSLOCG00000002210	pusl1	97	59.386	Lepisosteus_oculatus
ENSSDUG00000000287	pusl1	92	49.206	ENSLAFG00000013685	PUSL1	92	51.613	Loxodonta_africana
ENSSDUG00000000287	pusl1	93	46.953	ENSMFAG00000046288	PUSL1	90	50.725	Macaca_fascicularis
ENSSDUG00000000287	pusl1	93	40.647	ENSMMUG00000016279	PUSL1	89	44.364	Macaca_mulatta
ENSSDUG00000000287	pusl1	93	46.237	ENSMNEG00000037989	PUSL1	90	50.000	Macaca_nemestrina
ENSSDUG00000000287	pusl1	93	75.667	ENSMAMG00000016538	pusl1	99	75.667	Mastacembelus_armatus
ENSSDUG00000000287	pusl1	96	80.769	ENSMZEG00005026990	pusl1	99	80.268	Maylandia_zebra
ENSSDUG00000000287	pusl1	94	49.286	ENSMGAG00000003037	PUSL1	95	51.786	Meleagris_gallopavo
ENSSDUG00000000287	pusl1	99	43.345	ENSMAUG00000019924	Pusl1	98	45.890	Mesocricetus_auratus
ENSSDUG00000000287	pusl1	94	47.500	ENSMICG00000014171	PUSL1	93	50.903	Microcebus_murinus
ENSSDUG00000000287	pusl1	99	45.734	ENSMOCG00000005602	Pusl1	98	48.288	Microtus_ochrogaster
ENSSDUG00000000287	pusl1	96	74.453	ENSMMOG00000003269	pusl1	100	74.286	Mola_mola
ENSSDUG00000000287	pusl1	92	75.251	ENSMALG00000021686	pusl1	99	75.251	Monopterus_albus
ENSSDUG00000000287	pusl1	99	44.710	MGP_CAROLIEiJ_G0026911	Pusl1	98	47.279	Mus_caroli
ENSSDUG00000000287	pusl1	99	44.369	ENSMUSG00000051557	Pusl1	98	47.279	Mus_musculus
ENSSDUG00000000287	pusl1	99	45.051	MGP_PahariEiJ_G0029260	Pusl1	98	47.959	Mus_pahari
ENSSDUG00000000287	pusl1	99	45.051	MGP_SPRETEiJ_G0027906	Pusl1	98	47.959	Mus_spretus
ENSSDUG00000000287	pusl1	94	44.840	ENSMPUG00000014313	PUSL1	90	48.201	Mustela_putorius_furo
ENSSDUG00000000287	pusl1	94	45.196	ENSNGAG00000004647	Pusl1	82	48.561	Nannospalax_galili
ENSSDUG00000000287	pusl1	97	73.704	ENSNBRG00000014762	pusl1	98	73.704	Neolamprologus_brichardi
ENSSDUG00000000287	pusl1	90	50.607	ENSNLEG00000000051	PUSL1	90	51.600	Nomascus_leucogenys
ENSSDUG00000000287	pusl1	92	48.727	ENSMEUG00000011649	-	96	51.799	Notamacropus_eugenii
ENSSDUG00000000287	pusl1	91	44.578	ENSMEUG00000005176	-	98	44.578	Notamacropus_eugenii
ENSSDUG00000000287	pusl1	93	46.237	ENSODEG00000008247	PUSL1	89	49.281	Octodon_degus
ENSSDUG00000000287	pusl1	93	79.139	ENSONIG00000019361	pusl1	100	79.139	Oreochromis_niloticus
ENSSDUG00000000287	pusl1	91	70.748	ENSORLG00000016228	pusl1	99	70.748	Oryzias_latipes
ENSSDUG00000000287	pusl1	89	72.474	ENSORLG00020013710	pusl1	97	72.474	Oryzias_latipes_hni
ENSSDUG00000000287	pusl1	95	67.138	ENSORLG00015008715	pusl1	99	72.598	Oryzias_latipes_hsok
ENSSDUG00000000287	pusl1	89	73.519	ENSOMEG00000018897	pusl1	99	73.519	Oryzias_melastigma
ENSSDUG00000000287	pusl1	92	46.545	ENSOGAG00000031692	PUSL1	95	49.638	Otolemur_garnettii
ENSSDUG00000000287	pusl1	90	49.194	ENSOARG00000004905	PUSL1	93	50.602	Ovis_aries
ENSSDUG00000000287	pusl1	93	47.670	ENSPPAG00000029283	PUSL1	91	50.719	Pan_paniscus
ENSSDUG00000000287	pusl1	92	46.909	ENSPPRG00000023329	PUSL1	91	49.638	Panthera_pardus
ENSSDUG00000000287	pusl1	91	48.996	ENSPTIG00000018532	PUSL1	91	50.806	Panthera_tigris_altaica
ENSSDUG00000000287	pusl1	93	47.312	ENSPTRG00000000021	PUSL1	91	50.360	Pan_troglodytes
ENSSDUG00000000287	pusl1	93	46.953	ENSPANG00000000591	PUSL1	90	50.725	Papio_anubis
ENSSDUG00000000287	pusl1	93	60.432	ENSPKIG00000002447	pusl1	96	64.286	Paramormyrops_kingsleyae
ENSSDUG00000000287	pusl1	88	58.506	ENSPSIG00000002781	PUSL1	94	58.498	Pelodiscus_sinensis
ENSSDUG00000000287	pusl1	96	65.428	ENSPMGG00000011051	pusl1	99	66.182	Periophthalmus_magnuspinnatus
ENSSDUG00000000287	pusl1	99	44.710	ENSPEMG00000013541	Pusl1	98	47.260	Peromyscus_maniculatus_bairdii
ENSSDUG00000000287	pusl1	92	47.826	ENSPCIG00000007816	-	68	48.667	Phascolarctos_cinereus
ENSSDUG00000000287	pusl1	94	70.107	ENSPFOG00000015448	pusl1	98	72.297	Poecilia_formosa
ENSSDUG00000000287	pusl1	94	70.107	ENSPLAG00000004348	pusl1	97	74.306	Poecilia_latipinna
ENSSDUG00000000287	pusl1	96	69.818	ENSPMEG00000000931	pusl1	97	74.306	Poecilia_mexicana
ENSSDUG00000000287	pusl1	94	69.039	ENSPREG00000002324	pusl1	97	73.264	Poecilia_reticulata
ENSSDUG00000000287	pusl1	87	50.000	ENSPPYG00000002014	PUSL1	91	47.860	Pongo_abelii
ENSSDUG00000000287	pusl1	67	50.000	ENSPCAG00000002272	PUSL1	77	49.206	Procavia_capensis
ENSSDUG00000000287	pusl1	65	49.612	ENSPVAG00000001016	PUSL1	66	50.000	Pteropus_vampyrus
ENSSDUG00000000287	pusl1	74	81.667	ENSPNYG00000006588	pusl1	100	81.667	Pundamilia_nyererei
ENSSDUG00000000287	pusl1	93	62.545	ENSPNAG00000024441	pusl1	96	66.667	Pygocentrus_nattereri
ENSSDUG00000000287	pusl1	99	44.710	ENSRNOG00000022354	Pusl1	99	48.438	Rattus_norvegicus
ENSSDUG00000000287	pusl1	93	46.953	ENSRBIG00000036842	PUSL1	90	51.087	Rhinopithecus_bieti
ENSSDUG00000000287	pusl1	93	46.953	ENSRROG00000030704	PUSL1	90	51.087	Rhinopithecus_roxellana
ENSSDUG00000000287	pusl1	89	50.000	ENSSBOG00000032249	PUSL1	90	50.794	Saimiri_boliviensis_boliviensis
ENSSDUG00000000287	pusl1	93	60.289	ENSSFOG00015008281	pusl1	96	61.512	Scleropages_formosus
ENSSDUG00000000287	pusl1	93	78.477	ENSSMAG00000007187	pusl1	100	78.477	Scophthalmus_maximus
ENSSDUG00000000287	pusl1	97	97.756	ENSSLDG00000009605	pusl1	100	97.756	Seriola_lalandi_dorsalis
ENSSDUG00000000287	pusl1	61	47.879	ENSSARG00000005323	-	89	49.112	Sorex_araneus
ENSSDUG00000000287	pusl1	95	62.718	ENSSPAG00000002528	pusl1	100	70.073	Stegastes_partitus
ENSSDUG00000000287	pusl1	93	45.878	ENSSSCG00000003338	PUSL1	90	50.000	Sus_scrofa
ENSSDUG00000000287	pusl1	92	48.352	ENSTGUG00000003214	PUSL1	96	51.636	Taeniopygia_guttata
ENSSDUG00000000287	pusl1	89	72.222	ENSTRUG00000010102	pusl1	97	72.222	Takifugu_rubripes
ENSSDUG00000000287	pusl1	66	70.000	ENSTNIG00000005789	pusl1	82	69.061	Tetraodon_nigroviridis
ENSSDUG00000000287	pusl1	91	37.751	ENSTBEG00000005001	PUSL1	88	37.751	Tupaia_belangeri
ENSSDUG00000000287	pusl1	96	43.396	ENSTTRG00000017030	PUSL1	91	44.286	Tursiops_truncatus
ENSSDUG00000000287	pusl1	88	50.000	ENSUAMG00000012801	PUSL1	79	50.000	Ursus_americanus
ENSSDUG00000000287	pusl1	88	50.413	ENSUMAG00000002084	PUSL1	79	50.413	Ursus_maritimus
ENSSDUG00000000287	pusl1	94	45.714	ENSVVUG00000004320	PUSL1	91	43.671	Vulpes_vulpes
ENSSDUG00000000287	pusl1	75	50.218	ENSXETG00000011145	pusl1	100	54.348	Xenopus_tropicalis
ENSSDUG00000000287	pusl1	96	72.563	ENSXCOG00000017748	pusl1	100	72.563	Xiphophorus_couchianus
ENSSDUG00000000287	pusl1	94	70.107	ENSXMAG00000018846	pusl1	97	74.653	Xiphophorus_maculatus