EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000316 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6098 bases
Position: chrBDQW01000264.1:18435-24532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000326	MMR_HSR1	PF01926.23	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000363	-	729	-	ENSSDUP00000000326	242 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000000316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000316	-	99	99.583	ENSSDUG00000000370	-	94	99.583
ENSSDUG00000000316	-	83	41.872	ENSSDUG00000021349	-	87	41.872
ENSSDUG00000000316	-	99	83.401	ENSSDUG00000005919	-	85	83.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000316	-	95	37.179	ENSAPOG00000006213	-	79	37.179	Acanthochromis_polyacanthus
ENSSDUG00000000316	-	95	42.017	ENSACIG00000023712	-	58	42.017	Amphilophus_citrinellus
ENSSDUG00000000316	-	82	43.000	ENSACIG00000014950	-	84	43.000	Amphilophus_citrinellus
ENSSDUG00000000316	-	78	55.851	ENSATEG00000008595	-	67	55.851	Anabas_testudineus
ENSSDUG00000000316	-	97	43.404	ENSACLG00000015361	-	58	43.404	Astatotilapia_calliptera
ENSSDUG00000000316	-	83	63.366	ENSACLG00000023033	-	51	63.366	Astatotilapia_calliptera
ENSSDUG00000000316	-	98	46.798	ENSAMXG00000030535	-	57	47.032	Astyanax_mexicanus
ENSSDUG00000000316	-	99	42.149	ENSCVAG00000022669	-	84	42.149	Cyprinodon_variegatus
ENSSDUG00000000316	-	82	47.236	ENSCVAG00000014791	-	53	47.236	Cyprinodon_variegatus
ENSSDUG00000000316	-	90	42.273	ENSCVAG00000022676	-	65	42.273	Cyprinodon_variegatus
ENSSDUG00000000316	-	93	44.348	ENSDARG00000076398	si:dkey-201l21.4	56	44.348	Danio_rerio
ENSSDUG00000000316	-	99	44.939	ENSDARG00000100858	zgc:171695	58	44.939	Danio_rerio
ENSSDUG00000000316	-	91	43.363	ENSDARG00000039888	CR855393.1	62	43.363	Danio_rerio
ENSSDUG00000000316	-	94	44.206	ENSELUG00000022148	-	50	44.206	Esox_lucius
ENSSDUG00000000316	-	90	43.049	ENSFHEG00000002160	-	70	43.049	Fundulus_heteroclitus
ENSSDUG00000000316	-	71	50.575	ENSGMOG00000019744	-	98	50.575	Gadus_morhua
ENSSDUG00000000316	-	77	56.452	ENSGMOG00000008232	-	54	56.757	Gadus_morhua
ENSSDUG00000000316	-	83	55.172	ENSGMOG00000020059	-	98	55.172	Gadus_morhua
ENSSDUG00000000316	-	74	51.667	ENSGMOG00000020208	-	99	51.667	Gadus_morhua
ENSSDUG00000000316	-	83	51.724	ENSGMOG00000019786	-	99	51.724	Gadus_morhua
ENSSDUG00000000316	-	90	57.991	ENSGAFG00000018470	-	85	57.991	Gambusia_affinis
ENSSDUG00000000316	-	95	37.662	ENSGAFG00000005050	-	87	37.662	Gambusia_affinis
ENSSDUG00000000316	-	67	58.282	ENSGACG00000015787	-	75	58.282	Gasterosteus_aculeatus
ENSSDUG00000000316	-	91	43.049	ENSGACG00000005035	-	55	43.049	Gasterosteus_aculeatus
ENSSDUG00000000316	-	91	41.629	ENSGACG00000015437	-	55	41.629	Gasterosteus_aculeatus
ENSSDUG00000000316	-	78	43.158	ENSHBUG00000023729	-	50	43.158	Haplochromis_burtoni
ENSSDUG00000000316	-	97	40.254	ENSHBUG00000007413	-	94	40.254	Haplochromis_burtoni
ENSSDUG00000000316	-	95	43.644	ENSIPUG00000009201	-	91	43.644	Ictalurus_punctatus
ENSSDUG00000000316	-	90	43.049	ENSIPUG00000013512	-	53	43.049	Ictalurus_punctatus
ENSSDUG00000000316	-	89	43.519	ENSIPUG00000000082	-	91	43.519	Ictalurus_punctatus
ENSSDUG00000000316	-	81	63.452	ENSLBEG00000028432	-	75	63.452	Labrus_bergylta
ENSSDUG00000000316	-	91	34.842	ENSLBEG00000019795	-	91	34.842	Labrus_bergylta
ENSSDUG00000000316	-	90	57.273	ENSLBEG00000012781	-	83	57.273	Labrus_bergylta
ENSSDUG00000000316	-	90	58.824	ENSLOCG00000017620	-	64	58.824	Lepisosteus_oculatus
ENSSDUG00000000316	-	82	58.586	ENSMAMG00000015204	-	78	58.586	Mastacembelus_armatus
ENSSDUG00000000316	-	92	41.048	ENSMZEG00005028531	-	51	41.048	Maylandia_zebra
ENSSDUG00000000316	-	78	43.684	ENSMZEG00005023309	-	50	43.684	Maylandia_zebra
ENSSDUG00000000316	-	90	44.091	ENSMZEG00005004397	-	75	44.545	Maylandia_zebra
ENSSDUG00000000316	-	91	43.439	ENSMMOG00000011295	-	79	43.439	Mola_mola
ENSSDUG00000000316	-	94	42.060	ENSMMOG00000015162	-	89	42.060	Mola_mola
ENSSDUG00000000316	-	95	43.777	ENSNBRG00000006565	-	73	43.777	Neolamprologus_brichardi
ENSSDUG00000000316	-	95	41.304	ENSONIG00000017927	-	68	41.304	Oreochromis_niloticus
ENSSDUG00000000316	-	93	35.398	ENSONIG00000013617	-	53	35.398	Oreochromis_niloticus
ENSSDUG00000000316	-	95	40.171	ENSONIG00000013895	-	90	40.171	Oreochromis_niloticus
ENSSDUG00000000316	-	96	39.004	ENSPMGG00000002690	-	65	39.004	Periophthalmus_magnuspinnatus
ENSSDUG00000000316	-	90	40.889	ENSPMGG00000020583	-	53	40.889	Periophthalmus_magnuspinnatus
ENSSDUG00000000316	-	90	47.273	ENSPMGG00000016292	-	53	47.273	Periophthalmus_magnuspinnatus
ENSSDUG00000000316	-	90	35.146	ENSPMGG00000008676	-	65	35.146	Periophthalmus_magnuspinnatus
ENSSDUG00000000316	-	91	39.474	ENSPMGG00000016798	-	55	39.474	Periophthalmus_magnuspinnatus
ENSSDUG00000000316	-	91	43.750	ENSPLAG00000019926	-	80	43.750	Poecilia_latipinna
ENSSDUG00000000316	-	91	41.743	ENSPREG00000007255	-	53	41.743	Poecilia_reticulata
ENSSDUG00000000316	-	91	59.276	ENSPNYG00000016575	-	75	59.276	Pundamilia_nyererei
ENSSDUG00000000316	-	81	33.163	ENSPNAG00000011130	-	65	33.163	Pygocentrus_nattereri
ENSSDUG00000000316	-	98	39.662	ENSSLDG00000018054	-	95	39.662	Seriola_lalandi_dorsalis
ENSSDUG00000000316	-	78	55.851	ENSSLDG00000017661	-	81	55.851	Seriola_lalandi_dorsalis
ENSSDUG00000000316	-	88	41.395	ENSSPAG00000015996	-	80	41.395	Stegastes_partitus
ENSSDUG00000000316	-	82	63.819	ENSSPAG00000003300	-	78	63.819	Stegastes_partitus
ENSSDUG00000000316	-	90	38.356	ENSTRUG00000017314	-	92	38.356	Takifugu_rubripes
ENSSDUG00000000316	-	91	45.946	ENSTRUG00000001460	-	68	45.946	Takifugu_rubripes
ENSSDUG00000000316	-	90	38.813	ENSTRUG00000021059	-	80	38.813	Takifugu_rubripes
ENSSDUG00000000316	-	90	42.986	ENSTNIG00000003332	-	55	42.986	Tetraodon_nigroviridis
ENSSDUG00000000316	-	91	42.081	ENSTNIG00000006523	-	55	42.081	Tetraodon_nigroviridis
ENSSDUG00000000316	-	91	42.411	ENSTNIG00000005878	-	58	42.411	Tetraodon_nigroviridis
ENSSDUG00000000316	-	93	40.708	ENSXCOG00000001022	-	55	40.708	Xiphophorus_couchianus