EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000329 (Gene tree)
Gene ID: 111237702
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10697 bases
Position: chrBDQW01001087.1:606455-617151
Accession: 111237702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000333	U3_assoc_6	PF08640.11	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000370	-	4345	XM_022766902	ENSSDUP00000000333	595 (aa)	XP_022622623	UPI000BBEFA8B

Gene Model

Click here to download ENSSDUG00000000329's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000329	utp6	100	55.946	ENSG00000108651	UTP6	100	55.946	Homo_sapiens
ENSSDUG00000000329	utp6	100	92.605	ENSAPOG00000000435	utp6	100	92.605	Acanthochromis_polyacanthus
ENSSDUG00000000329	utp6	99	56.711	ENSAMEG00000005443	UTP6	99	56.711	Ailuropoda_melanoleuca
ENSSDUG00000000329	utp6	100	87.563	ENSACIG00000004124	utp6	100	87.563	Amphilophus_citrinellus
ENSSDUG00000000329	utp6	100	91.429	ENSAOCG00000016812	utp6	100	91.429	Amphiprion_ocellaris
ENSSDUG00000000329	utp6	100	91.429	ENSAPEG00000023565	utp6	100	91.429	Amphiprion_percula
ENSSDUG00000000329	utp6	100	92.941	ENSATEG00000003401	utp6	100	92.941	Anabas_testudineus
ENSSDUG00000000329	utp6	99	57.601	ENSAPLG00000005821	UTP6	99	57.601	Anas_platyrhynchos
ENSSDUG00000000329	utp6	100	59.464	ENSACAG00000009472	UTP6	100	59.464	Anolis_carolinensis
ENSSDUG00000000329	utp6	100	55.611	ENSANAG00000034603	UTP6	100	55.611	Aotus_nancymaae
ENSSDUG00000000329	utp6	100	90.420	ENSACLG00000006728	utp6	100	90.420	Astatotilapia_calliptera
ENSSDUG00000000329	utp6	100	72.941	ENSAMXG00000009478	utp6	100	72.941	Astyanax_mexicanus
ENSSDUG00000000329	utp6	100	51.338	ENSBTAG00000003769	-	98	51.338	Bos_taurus
ENSSDUG00000000329	utp6	100	52.508	ENSBTAG00000015612	UTP6	100	52.508	Bos_taurus
ENSSDUG00000000329	utp6	100	55.611	ENSCJAG00000014115	UTP6	100	55.611	Callithrix_jacchus
ENSSDUG00000000329	utp6	100	56.020	ENSCAFG00000018507	UTP6	100	56.020	Canis_familiaris
ENSSDUG00000000329	utp6	100	56.020	ENSCAFG00020014678	UTP6	100	56.020	Canis_lupus_dingo
ENSSDUG00000000329	utp6	100	53.344	ENSCHIG00000009726	-	100	53.344	Capra_hircus
ENSSDUG00000000329	utp6	100	53.344	ENSCHIG00000017954	-	100	53.344	Capra_hircus
ENSSDUG00000000329	utp6	99	51.256	ENSTSYG00000002202	UTP6	99	51.256	Carlito_syrichta
ENSSDUG00000000329	utp6	86	50.291	ENSCAPG00000017595	UTP6	93	50.291	Cavia_aperea
ENSSDUG00000000329	utp6	99	56.544	ENSCPOG00000014294	UTP6	100	56.544	Cavia_porcellus
ENSSDUG00000000329	utp6	100	51.591	ENSCCAG00000033318	-	100	51.591	Cebus_capucinus
ENSSDUG00000000329	utp6	100	56.187	ENSCATG00000034868	UTP6	100	56.187	Cercocebus_atys
ENSSDUG00000000329	utp6	99	56.040	ENSCLAG00000007274	UTP6	99	56.040	Chinchilla_lanigera
ENSSDUG00000000329	utp6	100	56.020	ENSCSAG00000006595	UTP6	100	56.020	Chlorocebus_sabaeus
ENSSDUG00000000329	utp6	73	46.875	ENSCHOG00000010940	-	73	46.875	Choloepus_hoffmanni
ENSSDUG00000000329	utp6	100	61.642	ENSCPBG00000004652	UTP6	100	61.642	Chrysemys_picta_bellii
ENSSDUG00000000329	utp6	99	31.803	ENSCING00000022947	-	99	31.803	Ciona_intestinalis
ENSSDUG00000000329	utp6	54	37.309	ENSCSAVG00000011416	-	99	37.309	Ciona_savignyi
ENSSDUG00000000329	utp6	87	40.840	ENSCANG00000031141	UTP6	89	40.840	Colobus_angolensis_palliatus
ENSSDUG00000000329	utp6	99	55.611	ENSCGRG00001000046	Utp6	100	55.611	Cricetulus_griseus_chok1gshd
ENSSDUG00000000329	utp6	95	54.417	ENSCGRG00000011543	Utp6	100	54.417	Cricetulus_griseus_crigri
ENSSDUG00000000329	utp6	100	78.188	ENSCSEG00000013422	utp6	100	95.082	Cynoglossus_semilaevis
ENSSDUG00000000329	utp6	100	88.067	ENSCVAG00000020322	utp6	100	88.067	Cyprinodon_variegatus
ENSSDUG00000000329	utp6	100	70.756	ENSDARG00000098433	utp6	100	77.901	Danio_rerio
ENSSDUG00000000329	utp6	100	56.187	ENSDNOG00000037018	UTP6	100	56.187	Dasypus_novemcinctus
ENSSDUG00000000329	utp6	95	54.690	ENSDORG00000003843	Utp6	99	56.801	Dipodomys_ordii
ENSSDUG00000000329	utp6	100	56.187	ENSEASG00005010870	UTP6	100	56.187	Equus_asinus_asinus
ENSSDUG00000000329	utp6	100	56.355	ENSECAG00000022217	UTP6	100	56.355	Equus_caballus
ENSSDUG00000000329	utp6	100	78.151	ENSELUG00000006618	utp6	100	78.151	Esox_lucius
ENSSDUG00000000329	utp6	100	54.500	ENSFCAG00000015795	UTP6	100	54.500	Felis_catus
ENSSDUG00000000329	utp6	100	61.139	ENSFALG00000002282	UTP6	100	61.139	Ficedula_albicollis
ENSSDUG00000000329	utp6	99	56.544	ENSFDAG00000019506	UTP6	100	56.544	Fukomys_damarensis
ENSSDUG00000000329	utp6	100	87.395	ENSFHEG00000010373	utp6	100	87.395	Fundulus_heteroclitus
ENSSDUG00000000329	utp6	100	77.311	ENSGMOG00000011958	utp6	100	77.311	Gadus_morhua
ENSSDUG00000000329	utp6	100	59.799	ENSGALG00000003260	UTP6	100	59.799	Gallus_gallus
ENSSDUG00000000329	utp6	100	89.076	ENSGAFG00000008505	utp6	100	89.076	Gambusia_affinis
ENSSDUG00000000329	utp6	100	89.244	ENSGACG00000019424	utp6	100	89.244	Gasterosteus_aculeatus
ENSSDUG00000000329	utp6	100	60.804	ENSGAGG00000004820	UTP6	100	60.804	Gopherus_agassizii
ENSSDUG00000000329	utp6	100	45.973	ENSGGOG00000026003	-	100	45.973	Gorilla_gorilla
ENSSDUG00000000329	utp6	100	56.281	ENSGGOG00000013569	UTP6	100	56.281	Gorilla_gorilla
ENSSDUG00000000329	utp6	100	90.420	ENSHBUG00000018668	utp6	100	90.420	Haplochromis_burtoni
ENSSDUG00000000329	utp6	99	56.040	ENSHGLG00000010332	UTP6	100	56.040	Heterocephalus_glaber_female
ENSSDUG00000000329	utp6	99	51.939	ENSHGLG00000008642	-	99	51.939	Heterocephalus_glaber_female
ENSSDUG00000000329	utp6	99	53.020	ENSHGLG00100014271	-	100	53.020	Heterocephalus_glaber_male
ENSSDUG00000000329	utp6	95	53.345	ENSHGLG00100006047	-	99	53.345	Heterocephalus_glaber_male
ENSSDUG00000000329	utp6	100	80.504	ENSHCOG00000017277	utp6	100	80.504	Hippocampus_comes
ENSSDUG00000000329	utp6	100	71.765	ENSIPUG00000022587	Utp6	100	71.765	Ictalurus_punctatus
ENSSDUG00000000329	utp6	99	57.023	ENSSTOG00000015875	UTP6	100	57.023	Ictidomys_tridecemlineatus
ENSSDUG00000000329	utp6	100	89.412	ENSKMAG00000021631	utp6	100	89.412	Kryptolebias_marmoratus
ENSSDUG00000000329	utp6	100	90.756	ENSLBEG00000002115	utp6	100	90.756	Labrus_bergylta
ENSSDUG00000000329	utp6	100	64.322	ENSLACG00000017158	UTP6	100	64.322	Latimeria_chalumnae
ENSSDUG00000000329	utp6	91	69.358	ENSLOCG00000013797	utp6	90	69.358	Lepisosteus_oculatus
ENSSDUG00000000329	utp6	100	55.351	ENSLAFG00000013008	UTP6	100	55.351	Loxodonta_africana
ENSSDUG00000000329	utp6	85	46.569	ENSMFAG00000041904	-	96	46.569	Macaca_fascicularis
ENSSDUG00000000329	utp6	100	56.187	ENSMFAG00000038842	UTP6	100	56.187	Macaca_fascicularis
ENSSDUG00000000329	utp6	100	56.187	ENSMMUG00000020403	UTP6	100	56.187	Macaca_mulatta
ENSSDUG00000000329	utp6	100	56.187	ENSMNEG00000039480	UTP6	100	56.187	Macaca_nemestrina
ENSSDUG00000000329	utp6	100	44.649	ENSMLEG00000039364	-	100	44.649	Mandrillus_leucophaeus
ENSSDUG00000000329	utp6	100	50.250	ENSMLEG00000032174	UTP6	100	50.250	Mandrillus_leucophaeus
ENSSDUG00000000329	utp6	100	90.420	ENSMAMG00000002228	utp6	99	90.420	Mastacembelus_armatus
ENSSDUG00000000329	utp6	100	90.420	ENSMZEG00005023895	utp6	100	90.420	Maylandia_zebra
ENSSDUG00000000329	utp6	95	58.451	ENSMGAG00000008111	UTP6	100	58.451	Meleagris_gallopavo
ENSSDUG00000000329	utp6	99	55.611	ENSMAUG00000021895	Utp6	100	55.611	Mesocricetus_auratus
ENSSDUG00000000329	utp6	100	54.424	ENSMICG00000002632	UTP6	100	54.424	Microcebus_murinus
ENSSDUG00000000329	utp6	99	55.611	ENSMOCG00000014163	Utp6	100	55.611	Microtus_ochrogaster
ENSSDUG00000000329	utp6	100	84.538	ENSMMOG00000008653	utp6	100	91.525	Mola_mola
ENSSDUG00000000329	utp6	100	57.860	ENSMODG00000019206	UTP6	100	57.860	Monodelphis_domestica
ENSSDUG00000000329	utp6	100	92.605	ENSMALG00000021112	utp6	100	92.605	Monopterus_albus
ENSSDUG00000000329	utp6	99	55.779	MGP_CAROLIEiJ_G0016828	Utp6	100	55.779	Mus_caroli
ENSSDUG00000000329	utp6	99	56.114	ENSMUSG00000035575	Utp6	100	56.114	Mus_musculus
ENSSDUG00000000329	utp6	99	52.261	MGP_PahariEiJ_G0017965	Utp6	100	52.094	Mus_pahari
ENSSDUG00000000329	utp6	99	55.611	MGP_SPRETEiJ_G0017672	Utp6	100	55.611	Mus_spretus
ENSSDUG00000000329	utp6	100	54.606	ENSMPUG00000014581	UTP6	100	54.606	Mustela_putorius_furo
ENSSDUG00000000329	utp6	100	56.522	ENSMLUG00000016422	UTP6	100	56.522	Myotis_lucifugus
ENSSDUG00000000329	utp6	99	56.355	ENSNGAG00000015482	Utp6	100	56.355	Nannospalax_galili
ENSSDUG00000000329	utp6	100	90.420	ENSNBRG00000019714	utp6	100	90.420	Neolamprologus_brichardi
ENSSDUG00000000329	utp6	100	55.611	ENSNLEG00000011009	UTP6	100	55.611	Nomascus_leucogenys
ENSSDUG00000000329	utp6	88	57.447	ENSOPRG00000008446	-	89	57.447	Ochotona_princeps
ENSSDUG00000000329	utp6	66	60.759	ENSODEG00000011971	UTP6	99	60.759	Octodon_degus
ENSSDUG00000000329	utp6	100	89.748	ENSONIG00000018090	utp6	100	89.748	Oreochromis_niloticus
ENSSDUG00000000329	utp6	98	56.973	ENSOANG00000004279	UTP6	99	56.973	Ornithorhynchus_anatinus
ENSSDUG00000000329	utp6	99	55.611	ENSOCUG00000016980	UTP6	99	55.611	Oryctolagus_cuniculus
ENSSDUG00000000329	utp6	99	86.869	ENSORLG00000003546	utp6	64	86.869	Oryzias_latipes
ENSSDUG00000000329	utp6	99	86.869	ENSORLG00020010377	utp6	99	86.869	Oryzias_latipes_hni
ENSSDUG00000000329	utp6	99	86.532	ENSORLG00015008893	utp6	99	86.532	Oryzias_latipes_hsok
ENSSDUG00000000329	utp6	100	86.555	ENSOMEG00000017487	utp6	100	86.555	Oryzias_melastigma
ENSSDUG00000000329	utp6	87	49.143	ENSOGAG00000004511	UTP6	100	48.952	Otolemur_garnettii
ENSSDUG00000000329	utp6	100	53.512	ENSOARG00000013474	UTP6	100	53.512	Ovis_aries
ENSSDUG00000000329	utp6	100	56.114	ENSPPAG00000038089	UTP6	100	56.114	Pan_paniscus
ENSSDUG00000000329	utp6	100	46.309	ENSPPAG00000016895	-	100	46.309	Pan_paniscus
ENSSDUG00000000329	utp6	100	56.594	ENSPPRG00000001010	UTP6	100	56.594	Panthera_pardus
ENSSDUG00000000329	utp6	100	56.594	ENSPTIG00000013913	UTP6	100	56.594	Panthera_tigris_altaica
ENSSDUG00000000329	utp6	100	56.114	ENSPTRG00000008977	UTP6	100	56.114	Pan_troglodytes
ENSSDUG00000000329	utp6	100	46.141	ENSPTRG00000044798	-	100	46.141	Pan_troglodytes
ENSSDUG00000000329	utp6	100	54.424	ENSPANG00000023113	UTP6	100	54.424	Papio_anubis
ENSSDUG00000000329	utp6	99	44.221	ENSPANG00000034274	-	100	44.221	Papio_anubis
ENSSDUG00000000329	utp6	100	72.241	ENSPKIG00000004653	utp6	100	72.241	Paramormyrops_kingsleyae
ENSSDUG00000000329	utp6	100	60.906	ENSPSIG00000012435	UTP6	100	60.906	Pelodiscus_sinensis
ENSSDUG00000000329	utp6	100	86.555	ENSPMGG00000009548	utp6	100	86.555	Periophthalmus_magnuspinnatus
ENSSDUG00000000329	utp6	99	55.017	ENSPEMG00000014081	Utp6	100	55.017	Peromyscus_maniculatus_bairdii
ENSSDUG00000000329	utp6	93	46.277	ENSPMAG00000009561	utp6	100	46.277	Petromyzon_marinus
ENSSDUG00000000329	utp6	100	60.804	ENSPCIG00000029968	UTP6	86	60.804	Phascolarctos_cinereus
ENSSDUG00000000329	utp6	100	87.395	ENSPFOG00000013918	utp6	100	87.395	Poecilia_formosa
ENSSDUG00000000329	utp6	100	87.227	ENSPLAG00000017825	utp6	100	87.227	Poecilia_latipinna
ENSSDUG00000000329	utp6	100	87.563	ENSPMEG00000008133	utp6	100	87.563	Poecilia_mexicana
ENSSDUG00000000329	utp6	100	85.210	ENSPREG00000013108	utp6	99	85.210	Poecilia_reticulata
ENSSDUG00000000329	utp6	100	54.104	ENSPPYG00000008154	UTP6	100	54.104	Pongo_abelii
ENSSDUG00000000329	utp6	100	54.090	ENSPCOG00000010224	UTP6	100	54.090	Propithecus_coquereli
ENSSDUG00000000329	utp6	100	52.922	ENSPVAG00000015759	UTP6	100	52.922	Pteropus_vampyrus
ENSSDUG00000000329	utp6	100	90.084	ENSPNYG00000002290	utp6	100	90.084	Pundamilia_nyererei
ENSSDUG00000000329	utp6	100	69.580	ENSPNAG00000027370	utp6	100	69.580	Pygocentrus_nattereri
ENSSDUG00000000329	utp6	99	55.611	ENSRNOG00000014209	Utp6	100	55.611	Rattus_norvegicus
ENSSDUG00000000329	utp6	100	56.355	ENSRBIG00000020822	UTP6	100	56.355	Rhinopithecus_bieti
ENSSDUG00000000329	utp6	100	56.355	ENSRROG00000036838	UTP6	100	56.355	Rhinopithecus_roxellana
ENSSDUG00000000329	utp6	50	60.133	ENSSHAG00000018792	-	98	60.133	Sarcophilus_harrisii
ENSSDUG00000000329	utp6	100	72.742	ENSSFOG00015005978	utp6	100	72.742	Scleropages_formosus
ENSSDUG00000000329	utp6	100	93.109	ENSSMAG00000014772	utp6	100	93.109	Scophthalmus_maximus
ENSSDUG00000000329	utp6	100	98.655	ENSSLDG00000016724	utp6	100	98.655	Seriola_lalandi_dorsalis
ENSSDUG00000000329	utp6	99	49.832	ENSSARG00000010778	UTP6	99	49.832	Sorex_araneus
ENSSDUG00000000329	utp6	100	61.474	ENSSPUG00000005273	UTP6	100	61.474	Sphenodon_punctatus
ENSSDUG00000000329	utp6	100	90.252	ENSSPAG00000011871	utp6	99	90.252	Stegastes_partitus
ENSSDUG00000000329	utp6	100	56.761	ENSSSCG00000017745	UTP6	100	56.761	Sus_scrofa
ENSSDUG00000000329	utp6	100	60.535	ENSTGUG00000004999	UTP6	100	60.535	Taeniopygia_guttata
ENSSDUG00000000329	utp6	99	84.512	ENSTRUG00000012005	utp6	100	84.512	Takifugu_rubripes
ENSSDUG00000000329	utp6	99	84.343	ENSTNIG00000003235	utp6	100	84.343	Tetraodon_nigroviridis
ENSSDUG00000000329	utp6	67	57.459	ENSTBEG00000005388	-	67	57.459	Tupaia_belangeri
ENSSDUG00000000329	utp6	100	55.853	ENSTTRG00000009911	UTP6	100	55.853	Tursiops_truncatus
ENSSDUG00000000329	utp6	99	56.208	ENSUMAG00000015139	UTP6	99	56.208	Ursus_maritimus
ENSSDUG00000000329	utp6	100	56.355	ENSVPAG00000005782	UTP6	100	56.355	Vicugna_pacos
ENSSDUG00000000329	utp6	100	56.187	ENSVVUG00000012238	UTP6	100	56.187	Vulpes_vulpes
ENSSDUG00000000329	utp6	100	51.082	ENSXETG00000020057	utp6	100	51.082	Xenopus_tropicalis
ENSSDUG00000000329	utp6	100	87.437	ENSXCOG00000013626	utp6	100	93.333	Xiphophorus_couchianus
ENSSDUG00000000329	utp6	100	87.899	ENSXMAG00000017414	utp6	100	87.899	Xiphophorus_maculatus