EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000000435 (Gene tree)
Gene ID
111235106
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
6812 bases
Position
chrBDQW01000468.1:1012935-1019746
Accession
111235106
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000000493YTHPF04146.157.2e-4111
ENSSDUP00000000514YTHPF04146.157.2e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000000535-4035XM_022763435ENSSDUP00000000493619 (aa)XP_022619156UPI000BBE658C
ENSSDUT00000000555-1737-ENSSDUP00000000514578 (aa)--
Gene Model
Click here to download ENSSDUG00000000435's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000435's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000000435ythdf19659.392ENSSDUG00000014403ythdf39460.512
ENSSDUG00000000435ythdf19660.387ENSSDUG00000016335ythdf29460.428
ENSSDUG00000000435ythdf19482.418ENSSDUG00000015823YTHDF19481.502
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000000435ythdf19673.451ENSG00000149658YTHDF19673.214Homo_sapiens
ENSSDUG00000000435ythdf110096.935ENSAPOG00000004358ythdf110096.935Acanthochromis_polyacanthus
ENSSDUG00000000435ythdf19976.101ENSAPOG00000010796YTHDF19780.634Acanthochromis_polyacanthus
ENSSDUG00000000435ythdf19473.993ENSAMEG00000017323YTHDF19374.677Ailuropoda_melanoleuca
ENSSDUG00000000435ythdf19688.277ENSACIG00000011264ythdf19688.455Amphilophus_citrinellus
ENSSDUG00000000435ythdf19680.859ENSACIG00000020083YTHDF19680.680Amphilophus_citrinellus
ENSSDUG00000000435ythdf110096.452ENSAOCG00000022251ythdf110096.452Amphiprion_ocellaris
ENSSDUG00000000435ythdf19680.143ENSAOCG00000012567YTHDF19978.400Amphiprion_ocellaris
ENSSDUG00000000435ythdf19680.322ENSAPEG00000008750YTHDF19978.560Amphiprion_percula
ENSSDUG00000000435ythdf110096.452ENSAPEG00000021878ythdf110096.452Amphiprion_percula
ENSSDUG00000000435ythdf19681.004ENSATEG00000005996YTHDF19977.671Anabas_testudineus
ENSSDUG00000000435ythdf110095.000ENSATEG00000023840ythdf110095.000Anabas_testudineus
ENSSDUG00000000435ythdf19475.320ENSAPLG00000005985YTHDF19475.416Anas_platyrhynchos
ENSSDUG00000000435ythdf19673.555ENSACAG00000005560YTHDF19674.373Anolis_carolinensis
ENSSDUG00000000435ythdf19861.228ENSANAG00000021022-9661.649Aotus_nancymaae
ENSSDUG00000000435ythdf19673.097ENSANAG00000034786-9673.425Aotus_nancymaae
ENSSDUG00000000435ythdf19680.143ENSACLG00000025518YTHDF19978.095Astatotilapia_calliptera
ENSSDUG00000000435ythdf19671.581ENSBTAG00000010383YTHDF19672.401Bos_taurus
ENSSDUG00000000435ythdf19672.920ENSCJAG00000010056YTHDF19673.118Callithrix_jacchus
ENSSDUG00000000435ythdf18973.398ENSCAFG00000012772YTHDF19673.622Canis_familiaris
ENSSDUG00000000435ythdf18973.398ENSCAFG00020001214YTHDF19673.622Canis_lupus_dingo
ENSSDUG00000000435ythdf19670.435ENSCHIG00000026494YTHDF19672.014Capra_hircus
ENSSDUG00000000435ythdf19474.176ENSTSYG00000033436YTHDF19474.861Carlito_syrichta
ENSSDUG00000000435ythdf19872.487ENSCAPG00000002544YTHDF19172.232Cavia_aperea
ENSSDUG00000000435ythdf19672.824ENSCPOG00000010202YTHDF19672.242Cavia_porcellus
ENSSDUG00000000435ythdf19872.648ENSCCAG00000024650YTHDF19673.036Cebus_capucinus
ENSSDUG00000000435ythdf19673.274ENSCATG00000033272YTHDF19673.835Cercocebus_atys
ENSSDUG00000000435ythdf19674.552ENSCLAG00000005989YTHDF19574.354Chinchilla_lanigera
ENSSDUG00000000435ythdf19673.274ENSCSAG00000016266YTHDF19673.835Chlorocebus_sabaeus
ENSSDUG00000000435ythdf19674.291ENSCPBG00000027183YTHDF19674.014Chrysemys_picta_bellii
ENSSDUG00000000435ythdf19474.270ENSCANG00000029082YTHDF19374.861Colobus_angolensis_palliatus
ENSSDUG00000000435ythdf19873.905ENSCGRG00001016568Ythdf19673.703Cricetulus_griseus_chok1gshd
ENSSDUG00000000435ythdf19474.725ENSCGRG00000009207Ythdf19574.723Cricetulus_griseus_crigri
ENSSDUG00000000435ythdf19689.892ENSCSEG00000020623YTHDF19789.531Cynoglossus_semilaevis
ENSSDUG00000000435ythdf19977.831ENSCVAG00000014378YTHDF19681.584Cyprinodon_variegatus
ENSSDUG00000000435ythdf110089.194ENSCVAG00000017940ythdf110088.548Cyprinodon_variegatus
ENSSDUG00000000435ythdf19983.819ENSDARG00000016447ythdf19983.414Danio_rerio
ENSSDUG00000000435ythdf19673.898ENSDNOG00000043590YTHDF19673.656Dasypus_novemcinctus
ENSSDUG00000000435ythdf19572.364ENSDORG00000002879Ythdf19172.243Dipodomys_ordii
ENSSDUG00000000435ythdf18056.024ENSETEG00000017860-9561.905Echinops_telfairi
ENSSDUG00000000435ythdf19973.162ENSEASG00005023186YTHDF19673.297Equus_asinus_asinus
ENSSDUG00000000435ythdf19874.126ENSECAG00000019475YTHDF19673.819Equus_caballus
ENSSDUG00000000435ythdf18973.180ENSEEUG00000007461YTHDF19672.179Erinaceus_europaeus
ENSSDUG00000000435ythdf19972.811ENSELUG00000001906YTHDF19678.053Esox_lucius
ENSSDUG00000000435ythdf19983.736ENSELUG00000022768ythdf19984.270Esox_lucius
ENSSDUG00000000435ythdf19672.809ENSFCAG00000008917YTHDF19673.477Felis_catus
ENSSDUG00000000435ythdf19673.721ENSFALG00000010463YTHDF19674.014Ficedula_albicollis
ENSSDUG00000000435ythdf19673.429ENSFDAG00000019602YTHDF19672.242Fukomys_damarensis
ENSSDUG00000000435ythdf19977.424ENSFHEG00000002540YTHDF19681.215Fundulus_heteroclitus
ENSSDUG00000000435ythdf110090.161ENSFHEG00000023218ythdf110090.484Fundulus_heteroclitus
ENSSDUG00000000435ythdf19782.993ENSGMOG00000019610ythdf18496.111Gadus_morhua
ENSSDUG00000000435ythdf19674.113ENSGALG00000005745YTHDF19674.213Gallus_gallus
ENSSDUG00000000435ythdf19976.258ENSGAFG00000021100YTHDF19978.240Gambusia_affinis
ENSSDUG00000000435ythdf19876.617ENSGACG00000002613YTHDF19776.764Gasterosteus_aculeatus
ENSSDUG00000000435ythdf19990.924ENSGACG00000012014ythdf19990.113Gasterosteus_aculeatus
ENSSDUG00000000435ythdf19674.468ENSGAGG00000003007YTHDF19674.153Gopherus_agassizii
ENSSDUG00000000435ythdf19774.205ENSGGOG00000008340YTHDF19673.393Gorilla_gorilla
ENSSDUG00000000435ythdf19679.606ENSHBUG00000004875YTHDF19977.619Haplochromis_burtoni
ENSSDUG00000000435ythdf19993.659ENSHBUG00000011284ythdf19793.984Haplochromis_burtoni
ENSSDUG00000000435ythdf19672.566ENSHGLG00000006585YTHDF19672.420Heterocephalus_glaber_female
ENSSDUG00000000435ythdf19672.566ENSHGLG00100004683YTHDF19672.420Heterocephalus_glaber_male
ENSSDUG00000000435ythdf19876.087ENSHCOG00000011303YTHDF19679.048Hippocampus_comes
ENSSDUG00000000435ythdf19787.542ENSHCOG00000008866ythdf19788.136Hippocampus_comes
ENSSDUG00000000435ythdf19979.200ENSIPUG00000000425Ythdf19978.730Ictalurus_punctatus
ENSSDUG00000000435ythdf19474.040ENSSTOG00000023001YTHDF19574.492Ictidomys_tridecemlineatus
ENSSDUG00000000435ythdf19673.665ENSJJAG00000013589Ythdf19574.307Jaculus_jaculus
ENSSDUG00000000435ythdf19977.655ENSKMAG00000017472YTHDF19681.031Kryptolebias_marmoratus
ENSSDUG00000000435ythdf110090.645ENSKMAG00000005595ythdf110089.355Kryptolebias_marmoratus
ENSSDUG00000000435ythdf110093.548ENSLBEG00000014105ythdf110093.387Labrus_bergylta
ENSSDUG00000000435ythdf19680.961ENSLBEG00000012068YTHDF19780.071Labrus_bergylta
ENSSDUG00000000435ythdf19674.234ENSLACG00000014195YTHDF19574.770Latimeria_chalumnae
ENSSDUG00000000435ythdf19876.910ENSLOCG00000005020ythdf19973.726Lepisosteus_oculatus
ENSSDUG00000000435ythdf19674.778ENSLAFG00000008884YTHDF19673.835Loxodonta_africana
ENSSDUG00000000435ythdf19673.274ENSMFAG00000042868YTHDF19673.835Macaca_fascicularis
ENSSDUG00000000435ythdf19774.067ENSMMUG00000009227YTHDF19673.835Macaca_mulatta
ENSSDUG00000000435ythdf19673.274ENSMNEG00000030851YTHDF19673.835Macaca_nemestrina
ENSSDUG00000000435ythdf19674.640ENSMLEG00000009252YTHDF19575.046Mandrillus_leucophaeus
ENSSDUG00000000435ythdf19681.038ENSMAMG00000011072YTHDF19977.955Mastacembelus_armatus
ENSSDUG00000000435ythdf110093.226ENSMAMG00000024255ythdf110092.258Mastacembelus_armatus
ENSSDUG00000000435ythdf19679.606ENSMZEG00005023596YTHDF19977.619Maylandia_zebra
ENSSDUG00000000435ythdf110093.700ENSMZEG00005026397ythdf110094.023Maylandia_zebra
ENSSDUG00000000435ythdf19475.137ENSMGAG00000006139YTHDF19375.231Meleagris_gallopavo
ENSSDUG00000000435ythdf19774.468ENSMAUG00000017660Ythdf19774.229Mesocricetus_auratus
ENSSDUG00000000435ythdf19672.647ENSMICG00000032266YTHDF19672.581Microcebus_murinus
ENSSDUG00000000435ythdf19673.890ENSMOCG00000013573Ythdf19673.882Microtus_ochrogaster
ENSSDUG00000000435ythdf19878.859ENSMMOG00000020467YTHDF19976.160Mola_mola
ENSSDUG00000000435ythdf19589.562ENSMMOG00000017500ythdf19587.710Mola_mola
ENSSDUG00000000435ythdf18974.854ENSMODG00000016842YTHDF19674.803Monodelphis_domestica
ENSSDUG00000000435ythdf19680.859ENSMALG00000022209YTHDF19680.859Monopterus_albus
ENSSDUG00000000435ythdf110093.871ENSMALG00000015672ythdf110093.871Monopterus_albus
ENSSDUG00000000435ythdf19673.451MGP_CAROLIEiJ_G0024790Ythdf19673.524Mus_caroli
ENSSDUG00000000435ythdf19673.451ENSMUSG00000038848Ythdf19673.524Mus_musculus
ENSSDUG00000000435ythdf19673.451MGP_PahariEiJ_G0026237Ythdf19673.524Mus_pahari
ENSSDUG00000000435ythdf19673.451MGP_SPRETEiJ_G0025715Ythdf19673.524Mus_spretus
ENSSDUG00000000435ythdf18970.312ENSMPUG00000008111YTHDF19671.709Mustela_putorius_furo
ENSSDUG00000000435ythdf19673.843ENSMLUG00000002241YTHDF19573.732Myotis_lucifugus
ENSSDUG00000000435ythdf19673.805ENSNGAG00000000334Ythdf19673.882Nannospalax_galili
ENSSDUG00000000435ythdf19593.888ENSNBRG00000008213ythdf19694.228Neolamprologus_brichardi
ENSSDUG00000000435ythdf19679.606ENSNBRG00000015321YTHDF19679.679Neolamprologus_brichardi
ENSSDUG00000000435ythdf19467.523ENSOPRG00000001758-9867.407Ochotona_princeps
ENSSDUG00000000435ythdf19660.071ENSODEG00000000074-9560.823Octodon_degus
ENSSDUG00000000435ythdf19773.016ENSODEG00000004380-9672.760Octodon_degus
ENSSDUG00000000435ythdf19592.360ENSONIG00000016799ythdf19993.333Oreochromis_niloticus
ENSSDUG00000000435ythdf19675.177ENSOANG00000003723YTHDF19674.731Ornithorhynchus_anatinus
ENSSDUG00000000435ythdf110089.839ENSORLG00000014665YTHDF110088.548Oryzias_latipes
ENSSDUG00000000435ythdf19976.603ENSORLG00000009739YTHDF19679.558Oryzias_latipes
ENSSDUG00000000435ythdf110090.468ENSORLG00020000307ythdf110089.176Oryzias_latipes_hni
ENSSDUG00000000435ythdf19976.763ENSORLG00020001332YTHDF19679.889Oryzias_latipes_hni
ENSSDUG00000000435ythdf19976.282ENSORLG00015018321YTHDF19679.190Oryzias_latipes_hsok
ENSSDUG00000000435ythdf110090.307ENSORLG00015006302ythdf110089.015Oryzias_latipes_hsok
ENSSDUG00000000435ythdf19977.338ENSOMEG00000011843YTHDF19976.699Oryzias_melastigma
ENSSDUG00000000435ythdf110090.630ENSOMEG00000002941YTHDF110089.338Oryzias_melastigma
ENSSDUG00000000435ythdf19672.085ENSOGAG00000000480YTHDF19672.321Otolemur_garnettii
ENSSDUG00000000435ythdf17688.889ENSOARG00000011639YTHDF19370.795Ovis_aries
ENSSDUG00000000435ythdf19774.205ENSPPAG00000023277YTHDF19574.586Pan_paniscus
ENSSDUG00000000435ythdf19673.166ENSPPRG00000020805YTHDF19673.835Panthera_pardus
ENSSDUG00000000435ythdf18080.335ENSPTIG00000017355YTHDF19279.464Panthera_tigris_altaica
ENSSDUG00000000435ythdf19774.205ENSPTRG00000013730YTHDF19673.393Pan_troglodytes
ENSSDUG00000000435ythdf19673.274ENSPANG00000021472YTHDF19673.835Papio_anubis
ENSSDUG00000000435ythdf19873.830ENSPKIG00000005026YTHDF19673.712Paramormyrops_kingsleyae
ENSSDUG00000000435ythdf19872.855ENSPKIG00000005427ythdf19673.488Paramormyrops_kingsleyae
ENSSDUG00000000435ythdf19675.676ENSPSIG00000005529YTHDF19374.954Pelodiscus_sinensis
ENSSDUG00000000435ythdf19487.478ENSPMGG00000015328ythdf19687.652Periophthalmus_magnuspinnatus
ENSSDUG00000000435ythdf19479.613ENSPMGG00000009101YTHDF19680.354Periophthalmus_magnuspinnatus
ENSSDUG00000000435ythdf19674.460ENSPEMG00000020199Ythdf19674.539Peromyscus_maniculatus_bairdii
ENSSDUG00000000435ythdf19875.306ENSPCIG00000017170YTHDF19675.000Phascolarctos_cinereus
ENSSDUG00000000435ythdf110089.499ENSPFOG00000005405ythdf110089.499Poecilia_formosa
ENSSDUG00000000435ythdf19977.636ENSPLAG00000006298YTHDF19978.240Poecilia_latipinna
ENSSDUG00000000435ythdf110089.499ENSPLAG00000006653ythdf110089.499Poecilia_latipinna
ENSSDUG00000000435ythdf110088.710ENSPMEG00000023753ythdf110089.355Poecilia_mexicana
ENSSDUG00000000435ythdf19977.636ENSPMEG00000020969-9978.240Poecilia_mexicana
ENSSDUG00000000435ythdf19778.305ENSPREG00000017662YTHDF19878.441Poecilia_reticulata
ENSSDUG00000000435ythdf110089.499ENSPREG00000002173ythdf110089.499Poecilia_reticulata
ENSSDUG00000000435ythdf18291.304ENSPPYG00000011226YTHDF19591.667Pongo_abelii
ENSSDUG00000000435ythdf18971.954ENSPCAG00000002452YTHDF19871.456Procavia_capensis
ENSSDUG00000000435ythdf19673.002ENSPCOG00000025969YTHDF19672.939Propithecus_coquereli
ENSSDUG00000000435ythdf19670.397ENSPVAG00000017568YTHDF19471.038Pteropus_vampyrus
ENSSDUG00000000435ythdf19679.606ENSPNYG00000002266YTHDF19977.619Pundamilia_nyererei
ENSSDUG00000000435ythdf19993.659ENSPNYG00000014007ythdf19794.265Pundamilia_nyererei
ENSSDUG00000000435ythdf19982.658ENSPNAG00000012447ythdf19983.226Pygocentrus_nattereri
ENSSDUG00000000435ythdf19673.179ENSRNOG00000027015Ythdf19673.524Rattus_norvegicus
ENSSDUG00000000435ythdf19672.389ENSRBIG00000044959YTHDF19672.939Rhinopithecus_bieti
ENSSDUG00000000435ythdf19672.389ENSRROG00000033014YTHDF19672.939Rhinopithecus_roxellana
ENSSDUG00000000435ythdf19572.727ENSSBOG00000027278YTHDF19672.047Saimiri_boliviensis_boliviensis
ENSSDUG00000000435ythdf19674.865ENSSHAG00000010430YTHDF18574.864Sarcophilus_harrisii
ENSSDUG00000000435ythdf19877.990ENSSFOG00015000284ythdf19975.362Scleropages_formosus
ENSSDUG00000000435ythdf19583.775ENSSMAG00000007635YTHDF19876.973Scophthalmus_maximus
ENSSDUG00000000435ythdf17397.452ENSSMAG00000013715ythdf19393.985Scophthalmus_maximus
ENSSDUG00000000435ythdf19999.675ENSSLDG00000024948ythdf19999.675Seriola_lalandi_dorsalis
ENSSDUG00000000435ythdf19976.972ENSSLDG00000001054YTHDF19095.000Seriola_lalandi_dorsalis
ENSSDUG00000000435ythdf18973.152ENSSPUG00000015143YTHDF19673.099Sphenodon_punctatus
ENSSDUG00000000435ythdf19975.943ENSSPAG00000003666YTHDF19977.352Stegastes_partitus
ENSSDUG00000000435ythdf110095.360ENSSPAG00000014989ythdf110095.360Stegastes_partitus
ENSSDUG00000000435ythdf19671.809ENSSSCG00000040086YTHDF19672.321Sus_scrofa
ENSSDUG00000000435ythdf19475.320ENSTGUG00000007565YTHDF19575.231Taeniopygia_guttata
ENSSDUG00000000435ythdf19591.156ENSTRUG00000004288ythdf19791.156Takifugu_rubripes
ENSSDUG00000000435ythdf19576.744ENSTRUG00000005049YTHDF19777.589Takifugu_rubripes
ENSSDUG00000000435ythdf19685.409ENSTNIG00000012490ythdf19685.409Tetraodon_nigroviridis
ENSSDUG00000000435ythdf19676.744ENSTNIG00000003975YTHDF19676.923Tetraodon_nigroviridis
ENSSDUG00000000435ythdf19872.378ENSTTRG00000001804YTHDF19772.581Tursiops_truncatus
ENSSDUG00000000435ythdf19573.503ENSUAMG00000011021YTHDF19673.622Ursus_americanus
ENSSDUG00000000435ythdf18972.394ENSUMAG00000022290YTHDF19673.228Ursus_maritimus
ENSSDUG00000000435ythdf18973.152ENSVVUG00000015275YTHDF19673.425Vulpes_vulpes
ENSSDUG00000000435ythdf19775.220ENSXETG00000027086ythdf19473.797Xenopus_tropicalis
ENSSDUG00000000435ythdf19677.265ENSXCOG00000008115YTHDF19978.311Xiphophorus_couchianus
ENSSDUG00000000435ythdf19790.681ENSXCOG00000002490ythdf19290.608Xiphophorus_couchianus
ENSSDUG00000000435ythdf110087.884ENSXMAG00000008525ythdf19989.279Xiphophorus_maculatus
ENSSDUG00000000435ythdf19481.584ENSXMAG00000015644YTHDF19978.240Xiphophorus_maculatus

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